Gene annotation
Transcriptome id Sobic.003G305100.1
Synonym Sb03g035360
Functional annotation expressed protein
UniProt C5XKV2
Pfam -
Panther DB PTHR36391 PTHR36391:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G08060 : -
RAP-DB (Rice) LOC_Os01g55770.1 : expressed protein
MaizeGDB (Corn) Zm00025a027452 , Zm00025a039961
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.003G305100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G277000 expressed protein -
2 Sobic.006G231500 acetyltransferase, GNAT family, putative, expressed K00670: NAA30, N-alpha-acetyltransferase 30
3 Sobic.007G091000 thioredoxin domain-containing protein 9, putative, expressed -
4 Sobic.009G062000 ribosomal protein L51, putative, expressed K03946: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 2
5 Sobic.002G296200 expressed protein -
6 Sobic.001G095632 - -
7 Sobic.002G260200 - -
8 Sobic.009G024500 50S ribosomal protein L10, chloroplast precursor, putative, expressed K02864: RP-L10, MRPL10, large subunit ribosomal protein L10
9 Sobic.001G538600 rhodanese, putative, expressed K18065: Cdc25 family phosphatase
10 Sobic.002G309700 ATP synthase delta chain, mitochondrial precursor, putative, expressed K02134: ATPeF1D, ATP5D, F-type H+-transporting ATPase subunit delta
11 Sobic.009G168000 selT-like protein precursor, putative, expressed -
12 Sobic.004G260200 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed -
13 Sobic.004G060500 fiber protein Fb15, putative, expressed -
14 Sobic.005G168100 ADP-ribosylation factor, putative, expressed K07950: ADP-ribosylation factor-like protein 5B
15 Sobic.001G286200 expressed protein K03966: NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 10
16 Sobic.007G177200 peptidase, T1 family, putative, expressed K02731: 20S proteasome subunit alpha 4
17 Sobic.004G202100 dehydrogenase, putative, expressed K00030: isocitrate dehydrogenase (NAD+)
18 Sobic.001G031800 ribosomal protein L30 containing protein, expressed K02907: RP-L30, MRPL30, large subunit ribosomal protein L30
19 Sobic.002G263100 ferredoxin 1-like isoform 1, putative, expressed -
20 Sobic.010G018400 expressed protein K02153: ATPeV0E, V-type H+-transporting ATPase subunit e


Gene co-expression network
sample Sobic003G305100 Sobic003G305100 Sobic003G277000 Sobic003G277000 Sobic003G305100--Sobic003G277000 Sobic006G231500 Sobic006G231500 Sobic003G305100--Sobic006G231500 Sobic007G091000 Sobic007G091000 Sobic003G305100--Sobic007G091000 Sobic009G062000 Sobic009G062000 Sobic003G305100--Sobic009G062000 Sobic002G296200 Sobic002G296200 Sobic003G305100--Sobic002G296200 Sobic001G095632 Sobic001G095632 Sobic003G305100--Sobic001G095632 Sobic002G260200 Sobic002G260200 Sobic003G305100--Sobic002G260200 Sobic009G024500 Sobic009G024500 Sobic003G305100--Sobic009G024500 Sobic001G538600 Sobic001G538600 Sobic003G305100--Sobic001G538600 Sobic003G277000--Sobic003G305100 Sobic003G277000--Sobic007G091000 Sobic002G078400 Sobic002G078400 Sobic003G277000--Sobic002G078400 Sobic003G277000--Sobic001G538600 Sobic009G131100 Sobic009G131100 Sobic003G277000--Sobic009G131100 Sobic001G533300 Sobic001G533300 Sobic003G277000--Sobic001G533300 Sobic002G222900 Sobic002G222900 Sobic003G277000--Sobic002G222900 Sobic001G286300 Sobic001G286300 Sobic003G277000--Sobic001G286300 Sobic009G168000 Sobic009G168000 Sobic003G277000--Sobic009G168000 Sobic006G231500--Sobic003G305100 Sobic009G212300 Sobic009G212300 Sobic006G231500--Sobic009G212300 Sobic009G001900 Sobic009G001900 Sobic006G231500--Sobic009G001900 Sobic004G202100 Sobic004G202100 Sobic006G231500--Sobic004G202100 Sobic004G012800 Sobic004G012800 Sobic006G231500--Sobic004G012800 Sobic006G109700 Sobic006G109700 Sobic006G231500--Sobic006G109700 Sobic006G231500--Sobic007G091000 Sobic006G231500--Sobic002G296200 Sobic006G231500--Sobic001G286300 Sobic007G091000--Sobic002G078400 Sobic003G362400 Sobic003G362400 Sobic007G091000--Sobic003G362400 Sobic001G128400 Sobic001G128400 Sobic007G091000--Sobic001G128400 Sobic005G111100 Sobic005G111100 Sobic007G091000--Sobic005G111100 Sobic007G152400 Sobic007G152400 Sobic007G091000--Sobic007G152400 Sobic007G091000--Sobic003G305100 Sobic003G368500 Sobic003G368500 Sobic007G091000--Sobic003G368500 Sobic001G025600 Sobic001G025600 Sobic007G091000--Sobic001G025600 Sobic007G091000--Sobic003G277000 Sobic001G304400 Sobic001G304400 Sobic009G062000--Sobic001G304400 Sobic009G062000--Sobic001G095632 Sobic008G129400 Sobic008G129400 Sobic009G062000--Sobic008G129400 Sobic001G432000 Sobic001G432000 Sobic009G062000--Sobic001G432000 Sobic010G018400 Sobic010G018400 Sobic009G062000--Sobic010G018400 Sobic004G351500 Sobic004G351500 Sobic009G062000--Sobic004G351500 Sobic009G062000--Sobic003G305100 Sobic001G286200 Sobic001G286200 Sobic009G062000--Sobic001G286200 Sobic002G073800 Sobic002G073800 Sobic009G062000--Sobic002G073800 Sobic006G013000 Sobic006G013000 Sobic002G296200--Sobic006G013000 Sobic007G134900 Sobic007G134900 Sobic002G296200--Sobic007G134900 Sobic001G074700 Sobic001G074700 Sobic002G296200--Sobic001G074700 Sobic003G215700 Sobic003G215700 Sobic002G296200--Sobic003G215700 Sobic002G309700 Sobic002G309700 Sobic002G296200--Sobic002G309700 Sobic001G134400 Sobic001G134400 Sobic002G296200--Sobic001G134400 Sobic001G047800 Sobic001G047800 Sobic002G296200--Sobic001G047800 Sobic002G296200--Sobic001G286200 Sobic003G129800 Sobic003G129800 Sobic002G296200--Sobic003G129800 Sobic001G095632--Sobic009G062000 Sobic001G095632--Sobic001G286200 Sobic004G060500 Sobic004G060500 Sobic001G095632--Sobic004G060500 Sobic001G095632--Sobic001G304400 Sobic010G264300 Sobic010G264300 Sobic001G095632--Sobic010G264300 Sobic002G078300 Sobic002G078300 Sobic001G095632--Sobic002G078300 Sobic001G095632--Sobic008G129400 Sobic001G095632--Sobic003G305100 Sobic002G356400 Sobic002G356400 Sobic001G095632--Sobic002G356400 Sobic007G013900 Sobic007G013900 Sobic002G260200--Sobic007G013900 Sobic002G260200--Sobic006G013000 Sobic001G031800 Sobic001G031800 Sobic002G260200--Sobic001G031800 Sobic004G159000 Sobic004G159000 Sobic002G260200--Sobic004G159000 Sobic002G260200--Sobic002G296200 Sobic002G262200 Sobic002G262200 Sobic002G260200--Sobic002G262200 Sobic002G260200--Sobic003G305100 Sobic002G260200--Sobic009G001900 Sobic004G260200 Sobic004G260200 Sobic002G260200--Sobic004G260200 Sobic002G263100 Sobic002G263100 Sobic009G024500--Sobic002G263100 Sobic009G024500--Sobic001G031800 Sobic003G296800 Sobic003G296800 Sobic009G024500--Sobic003G296800 Sobic009G024500--Sobic003G305100 Sobic009G024500--Sobic004G260200 Sobic009G077100 Sobic009G077100 Sobic009G024500--Sobic009G077100 Sobic009G024500--Sobic002G309700 Sobic009G024500--Sobic001G047800 Sobic009G024500--Sobic004G060500 Sobic001G538600--Sobic003G305100 Sobic001G538600--Sobic003G277000 Sobic001G538600--Sobic004G351500 Sobic001G538600--Sobic002G078400 Sobic001G364500 Sobic001G364500 Sobic001G538600--Sobic001G364500 Sobic004G262300 Sobic004G262300 Sobic001G538600--Sobic004G262300 Sobic001G538600--Sobic009G168000 Sobic001G538600--Sobic001G095632 Sobic001G087900 Sobic001G087900 Sobic001G538600--Sobic001G087900
Octagon: transcription factors


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