Gene annotation
Transcriptome id Sobic.004G060500.1
Synonym Sb04g005070
Functional annotation fiber protein Fb15, putative, expressed
UniProt C5XW76
Pfam -
Panther DB PTHR36059 PTHR36059:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G30010 : -
RAP-DB (Rice) LOC_Os02g07910.1 : fiber protein Fb15, putative, expressed
MaizeGDB (Corn) Zm00025a019140
Brachypodium KQJ93597
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.004G060500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G215700 ATP synthase epsilon chain, mitochondrial, putative, expressed K02135: ATPeF1E, ATP5E, F-type H+-transporting ATPase subunit epsilon
2 Sobic.009G176000 expressed protein K03945: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 1
3 Sobic.001G519000 expressed protein K03963: NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 7
4 Sobic.001G047800 cytochrome b-c1 complex subunit 7, putative, expressed K00417: QCR7, ubiquinol-cytochrome c reductase subunit 7
5 Sobic.006G083500 SLL1 protein, putative, expressed -
6 Sobic.002G418400 ubiquinol-cytochrome c reductase complex 6.7 kDa protein, putative, expressed -
7 Sobic.002G309700 ATP synthase delta chain, mitochondrial precursor, putative, expressed K02134: ATPeF1D, ATP5D, F-type H+-transporting ATPase subunit delta
8 Sobic.002G296200 expressed protein -
9 Sobic.010G059300 cytochrome b-c1 complex subunit 8, putative, expressed -
10 Sobic.001G134400 CHCH domain containing protein, expressed -
11 Sobic.001G074700 cytochrome c oxidase-related, putative, expressed K02266: cytochrome c oxidase subunit 6a
12 Sobic.003G209000 mitochondrial ATP synthase g subunit family protein, putative, expressed K02140: ATPeFG, ATP5L, F-type H+-transporting ATPase subunit g
13 Sobic.004G260200 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed -
14 Sobic.002G263100 ferredoxin 1-like isoform 1, putative, expressed -
15 Sobic.004G211833 - K02267: cytochrome c oxidase subunit 6b
16 Sobic.001G404800 CHCH domain containing protein, expressed K03952: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 8
17 Sobic.007G134900 expressed protein -
18 Sobic.002G356400 NADH dehydrogenase iron-sulfur protein 4, mitochondrial precursor, putative, expressed K03937: NADH dehydrogenase (ubiquinone) Fe-S protein 4
19 Sobic.003G296800 expressed protein -
20 Sobic.001G077000 similar to Cold acclimation protein COR413-PM1(PubMedID : 29862293)@cold acclimation protein WCOR413, putative, expressed -


Gene co-expression network
sample Sobic004G060500 Sobic004G060500 Sobic003G215700 Sobic003G215700 Sobic004G060500--Sobic003G215700 Sobic009G176000 Sobic009G176000 Sobic004G060500--Sobic009G176000 Sobic001G519000 Sobic001G519000 Sobic004G060500--Sobic001G519000 Sobic001G047800 Sobic001G047800 Sobic004G060500--Sobic001G047800 Sobic006G083500 Sobic006G083500 Sobic004G060500--Sobic006G083500 Sobic002G418400 Sobic002G418400 Sobic004G060500--Sobic002G418400 Sobic002G309700 Sobic002G309700 Sobic004G060500--Sobic002G309700 Sobic002G296200 Sobic002G296200 Sobic004G060500--Sobic002G296200 Sobic010G059300 Sobic010G059300 Sobic004G060500--Sobic010G059300 Sobic003G215700--Sobic006G083500 Sobic003G215700--Sobic002G418400 Sobic003G215700--Sobic001G047800 Sobic003G209000 Sobic003G209000 Sobic003G215700--Sobic003G209000 Sobic004G211833 Sobic004G211833 Sobic003G215700--Sobic004G211833 Sobic001G404800 Sobic001G404800 Sobic003G215700--Sobic001G404800 Sobic003G215700--Sobic004G060500 Sobic001G134400 Sobic001G134400 Sobic003G215700--Sobic001G134400 Sobic010G012500 Sobic010G012500 Sobic003G215700--Sobic010G012500 Sobic002G398901 Sobic002G398901 Sobic009G176000--Sobic002G398901 Sobic007G051000 Sobic007G051000 Sobic009G176000--Sobic007G051000 Sobic009G176000--Sobic006G083500 Sobic009G176000--Sobic010G012500 Sobic009G176000--Sobic004G211833 Sobic002G190900 Sobic002G190900 Sobic009G176000--Sobic002G190900 Sobic009G176000--Sobic004G060500 Sobic009G176000--Sobic002G418400 Sobic009G176000--Sobic003G215700 Sobic007G134900 Sobic007G134900 Sobic001G519000--Sobic007G134900 Sobic001G519000--Sobic004G060500 Sobic001G519000--Sobic003G215700 Sobic001G519000--Sobic001G047800 Sobic002G263100 Sobic002G263100 Sobic001G519000--Sobic002G263100 Sobic010G264300 Sobic010G264300 Sobic001G519000--Sobic010G264300 Sobic001G519000--Sobic002G309700 Sobic001G519000--Sobic002G296200 Sobic009G173500 Sobic009G173500 Sobic001G519000--Sobic009G173500 Sobic001G047800--Sobic002G309700 Sobic001G047800--Sobic003G215700 Sobic001G047800--Sobic002G418400 Sobic004G260200 Sobic004G260200 Sobic001G047800--Sobic004G260200 Sobic001G047800--Sobic001G404800 Sobic001G047800--Sobic002G263100 Sobic001G047800--Sobic004G060500 Sobic001G047800--Sobic007G134900 Sobic001G047800--Sobic001G519000 Sobic006G083500--Sobic004G211833 Sobic006G083500--Sobic010G012500 Sobic006G083500--Sobic003G215700 Sobic006G083500--Sobic002G418400 Sobic006G083500--Sobic009G176000 Sobic006G083500--Sobic002G398901 Sobic006G083500--Sobic003G209000 Sobic006G083500--Sobic007G051000 Sobic006G083500--Sobic001G134400 Sobic002G418400--Sobic006G083500 Sobic002G418400--Sobic003G215700 Sobic002G418400--Sobic003G209000 Sobic002G418400--Sobic002G398901 Sobic002G418400--Sobic004G211833 Sobic002G418400--Sobic010G012500 Sobic002G418400--Sobic001G047800 Sobic004G259200 Sobic004G259200 Sobic002G418400--Sobic004G259200 Sobic002G418400--Sobic001G404800 Sobic002G309700--Sobic004G260200 Sobic002G309700--Sobic001G047800 Sobic002G356400 Sobic002G356400 Sobic002G309700--Sobic002G356400 Sobic009G215300 Sobic009G215300 Sobic002G309700--Sobic009G215300 Sobic002G309700--Sobic001G404800 Sobic001G074700 Sobic001G074700 Sobic002G309700--Sobic001G074700 Sobic002G309700--Sobic002G296200 Sobic001G465800 Sobic001G465800 Sobic002G309700--Sobic001G465800 Sobic002G309700--Sobic003G215700 Sobic006G013000 Sobic006G013000 Sobic002G296200--Sobic006G013000 Sobic002G296200--Sobic007G134900 Sobic002G296200--Sobic001G074700 Sobic002G296200--Sobic003G215700 Sobic002G296200--Sobic002G309700 Sobic002G296200--Sobic001G134400 Sobic002G296200--Sobic001G047800 Sobic001G286200 Sobic001G286200 Sobic002G296200--Sobic001G286200 Sobic003G129800 Sobic003G129800 Sobic002G296200--Sobic003G129800 Sobic010G059300--Sobic004G060500 Sobic010G059300--Sobic001G519000 Sobic004G183200 Sobic004G183200 Sobic010G059300--Sobic004G183200 Sobic010G059300--Sobic001G047800 Sobic010G059300--Sobic010G264300 Sobic003G218400 Sobic003G218400 Sobic010G059300--Sobic003G218400 Sobic001G095632 Sobic001G095632 Sobic010G059300--Sobic001G095632 Sobic010G059300--Sobic002G418400 Sobic003G296800 Sobic003G296800 Sobic010G059300--Sobic003G296800
Octagon: transcription factors


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