Gene annotation
Transcriptome id Sobic.006G083500.2
Synonym Sb06g017000
Functional annotation SLL1 protein, putative, expressed
UniProt A0A1Z5RCX2
Pfam -
Panther DB PTHR36003 PTHR36003:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G72020 : -
RAP-DB (Rice) LOC_Os04g35300.1 : SLL1 protein, putative, expressed
MaizeGDB (Corn) Zm00025a011350
Brachypodium -
Barley -
Wheat TraesCS2A02G304400
Populus -


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cDNA sequences
Sobic.006G083500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G211833 - K02267: cytochrome c oxidase subunit 6b
2 Sobic.010G012500 ATOZI1, putative, expressed -
3 Sobic.003G215700 ATP synthase epsilon chain, mitochondrial, putative, expressed K02135: ATPeF1E, ATP5E, F-type H+-transporting ATPase subunit epsilon
4 Sobic.002G418400 ubiquinol-cytochrome c reductase complex 6.7 kDa protein, putative, expressed -
5 Sobic.009G176000 expressed protein K03945: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 1
6 Sobic.002G398901 - -
7 Sobic.003G209000 mitochondrial ATP synthase g subunit family protein, putative, expressed K02140: ATPeFG, ATP5L, F-type H+-transporting ATPase subunit g
8 Sobic.007G051000 mitochondrial NADH-ubiquinone oxidoreductase, putative, expressed K03939: NADH dehydrogenase (ubiquinone) Fe-S protein 6
9 Sobic.001G134400 CHCH domain containing protein, expressed -
10 Sobic.004G220000 kinase, pfkB family, putative, expressed K00856: E2.7.1.20, adenosine kinase
11 Sobic.002G190900 expressed protein -
12 Sobic.002G375100 ribosomal protein S2, putative, expressed K02998: RP-SAe, small subunit ribosomal protein SAe
13 Sobic.001G404800 CHCH domain containing protein, expressed K03952: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 8
14 Sobic.009G119900 acyl carrier protein, putative, expressed K03955: NADH dehydrogenase (ubiquinone) 1 alpha/beta subcomplex 1, acyl-carrier protein
15 Sobic.001G493001 - K02979: RP-S28e, small subunit ribosomal protein S28e
16 Sobic.001G047800 cytochrome b-c1 complex subunit 7, putative, expressed K00417: QCR7, ubiquinol-cytochrome c reductase subunit 7
17 Sobic.009G215200 60S ribosomal protein L28-1, putative, expressed K02903: RP-L28e, large subunit ribosomal protein L28e
18 Sobic.004G060500 fiber protein Fb15, putative, expressed -
19 Sobic.002G081600 ribosomal protein L7Ae, putative, expressed K02951: RP-S12e, small subunit ribosomal protein S12e
20 Sobic.010G251600 60S acidic ribosomal protein, putative, expressed K02942: RP-LP1, large subunit ribosomal protein LP1


Gene co-expression network
sample Sobic006G083500 Sobic006G083500 Sobic004G211833 Sobic004G211833 Sobic006G083500--Sobic004G211833 Sobic010G012500 Sobic010G012500 Sobic006G083500--Sobic010G012500 Sobic003G215700 Sobic003G215700 Sobic006G083500--Sobic003G215700 Sobic002G418400 Sobic002G418400 Sobic006G083500--Sobic002G418400 Sobic009G176000 Sobic009G176000 Sobic006G083500--Sobic009G176000 Sobic002G398901 Sobic002G398901 Sobic006G083500--Sobic002G398901 Sobic003G209000 Sobic003G209000 Sobic006G083500--Sobic003G209000 Sobic007G051000 Sobic007G051000 Sobic006G083500--Sobic007G051000 Sobic001G134400 Sobic001G134400 Sobic006G083500--Sobic001G134400 Sobic004G211833--Sobic010G012500 Sobic004G211833--Sobic006G083500 Sobic004G211833--Sobic002G398901 Sobic004G220000 Sobic004G220000 Sobic004G211833--Sobic004G220000 Sobic004G211833--Sobic007G051000 Sobic004G211833--Sobic009G176000 Sobic004G211833--Sobic002G418400 Sobic002G190900 Sobic002G190900 Sobic004G211833--Sobic002G190900 Sobic004G211833--Sobic003G215700 Sobic010G012500--Sobic004G211833 Sobic010G012500--Sobic002G398901 Sobic010G012500--Sobic006G083500 Sobic010G012500--Sobic007G051000 Sobic010G012500--Sobic002G190900 Sobic010G012500--Sobic004G220000 Sobic010G012500--Sobic009G176000 Sobic002G375100 Sobic002G375100 Sobic010G012500--Sobic002G375100 Sobic010G012500--Sobic002G418400 Sobic003G215700--Sobic006G083500 Sobic003G215700--Sobic002G418400 Sobic001G047800 Sobic001G047800 Sobic003G215700--Sobic001G047800 Sobic003G215700--Sobic003G209000 Sobic003G215700--Sobic004G211833 Sobic001G404800 Sobic001G404800 Sobic003G215700--Sobic001G404800 Sobic004G060500 Sobic004G060500 Sobic003G215700--Sobic004G060500 Sobic003G215700--Sobic001G134400 Sobic003G215700--Sobic010G012500 Sobic002G418400--Sobic006G083500 Sobic002G418400--Sobic003G215700 Sobic002G418400--Sobic003G209000 Sobic002G418400--Sobic002G398901 Sobic002G418400--Sobic004G211833 Sobic002G418400--Sobic010G012500 Sobic002G418400--Sobic001G047800 Sobic004G259200 Sobic004G259200 Sobic002G418400--Sobic004G259200 Sobic002G418400--Sobic001G404800 Sobic009G176000--Sobic002G398901 Sobic009G176000--Sobic007G051000 Sobic009G176000--Sobic006G083500 Sobic009G176000--Sobic010G012500 Sobic009G176000--Sobic004G211833 Sobic009G176000--Sobic002G190900 Sobic009G176000--Sobic004G060500 Sobic009G176000--Sobic002G418400 Sobic009G176000--Sobic003G215700 Sobic002G398901--Sobic002G190900 Sobic002G398901--Sobic010G012500 Sobic002G398901--Sobic009G176000 Sobic002G398901--Sobic007G051000 Sobic002G398901--Sobic004G211833 Sobic002G081600 Sobic002G081600 Sobic002G398901--Sobic002G081600 Sobic002G398901--Sobic002G418400 Sobic002G398901--Sobic006G083500 Sobic009G215200 Sobic009G215200 Sobic002G398901--Sobic009G215200 Sobic003G209000--Sobic004G259200 Sobic003G209000--Sobic001G404800 Sobic003G209000--Sobic002G418400 Sobic001G018500 Sobic001G018500 Sobic003G209000--Sobic001G018500 Sobic003G209000--Sobic006G083500 Sobic003G209000--Sobic003G215700 Sobic003G209000--Sobic007G051000 Sobic009G119900 Sobic009G119900 Sobic003G209000--Sobic009G119900 Sobic003G209000--Sobic002G398901 Sobic007G051000--Sobic010G012500 Sobic007G051000--Sobic009G176000 Sobic007G051000--Sobic002G398901 Sobic007G051000--Sobic004G211833 Sobic007G051000--Sobic002G190900 Sobic007G051000--Sobic006G083500 Sobic007G051000--Sobic001G018500 Sobic007G051000--Sobic003G209000 Sobic010G204500 Sobic010G204500 Sobic007G051000--Sobic010G204500 Sobic001G134400--Sobic006G083500 Sobic001G134400--Sobic003G215700 Sobic001G134400--Sobic009G176000 Sobic007G053300 Sobic007G053300 Sobic001G134400--Sobic007G053300 Sobic002G296200 Sobic002G296200 Sobic001G134400--Sobic002G296200 Sobic001G134400--Sobic004G211833 Sobic001G074700 Sobic001G074700 Sobic001G134400--Sobic001G074700 Sobic007G134000 Sobic007G134000 Sobic001G134400--Sobic007G134000 Sobic001G134400--Sobic010G012500
Octagon: transcription factors


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