Gene annotation
Transcriptome id Sobic.001G404800.1
Synonym Sb01g038290
Functional annotation CHCH domain containing protein, expressed
UniProt A0A1Z5SA07
Pfam PF06747
Panther DB PTHR13344 PTHR13344:SF0
NCBI CDD -
KEGG Orthology K03952; NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 8
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G18800 : Cox19-like CHCH family protein
RAP-DB (Rice) LOC_Os03g18420.1 : CHCH domain containing protein, expressed
MaizeGDB (Corn) Zm00025a052644 , Zm00025a002021
Brachypodium KQK22115 , KQK22114
Barley HORVU4Hr1G055850.2 , HORVU4Hr1G055850.1
Wheat TraesCS4D02G193300 , TraesCS4A02G111800
Populus -


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cDNA sequences
Sobic.001G404800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G209000 mitochondrial ATP synthase g subunit family protein, putative, expressed K02140: ATPeFG, ATP5L, F-type H+-transporting ATPase subunit g
2 Sobic.004G259200 mitochondrial carrier protein, putative, expressed K05863: SLC25A4S, solute carrier family 25 (mitochondrial adenine nucleotide translocator), member 4/5/6/31
3 Sobic.001G047800 cytochrome b-c1 complex subunit 7, putative, expressed K00417: QCR7, ubiquinol-cytochrome c reductase subunit 7
4 Sobic.003G215700 ATP synthase epsilon chain, mitochondrial, putative, expressed K02135: ATPeF1E, ATP5E, F-type H+-transporting ATPase subunit epsilon
5 Sobic.002G418400 ubiquinol-cytochrome c reductase complex 6.7 kDa protein, putative, expressed -
6 Sobic.002G356400 NADH dehydrogenase iron-sulfur protein 4, mitochondrial precursor, putative, expressed K03937: NADH dehydrogenase (ubiquinone) Fe-S protein 4
7 Sobic.002G309700 ATP synthase delta chain, mitochondrial precursor, putative, expressed K02134: ATPeF1D, ATP5D, F-type H+-transporting ATPase subunit delta
8 Sobic.006G083500 SLL1 protein, putative, expressed -
9 Sobic.004G260200 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed -
10 Sobic.001G350600 cytochrome c oxidase subunit, putative, expressed K02267: cytochrome c oxidase subunit 6b
11 Sobic.001G018500 expressed protein K17784: MINOS1, mitochondrial inner membrane organizing system protein 1
12 Sobic.004G170400 ubiquinol-cytochrome C reductase hinge protein, putative, expressed K00416: QCR6, ubiquinol-cytochrome c reductase subunit 6
13 Sobic.001G074700 cytochrome c oxidase-related, putative, expressed K02266: cytochrome c oxidase subunit 6a
14 Sobic.004G211833 - K02267: cytochrome c oxidase subunit 6b
15 Sobic.001G465800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@outer mitochondrial membrane porin, putative, expressed K15040: voltage-dependent anion channel protein 2
16 Sobic.009G119900 acyl carrier protein, putative, expressed K03955: NADH dehydrogenase (ubiquinone) 1 alpha/beta subcomplex 1, acyl-carrier protein
17 Sobic.009G215300 fiber protein Fb11, putative, expressed -
18 Sobic.002G263100 ferredoxin 1-like isoform 1, putative, expressed -
19 Sobic.007G051000 mitochondrial NADH-ubiquinone oxidoreductase, putative, expressed K03939: NADH dehydrogenase (ubiquinone) Fe-S protein 6
20 Sobic.010G012500 ATOZI1, putative, expressed -


Gene co-expression network
sample Sobic001G404800 Sobic001G404800 Sobic003G209000 Sobic003G209000 Sobic001G404800--Sobic003G209000 Sobic004G259200 Sobic004G259200 Sobic001G404800--Sobic004G259200 Sobic001G047800 Sobic001G047800 Sobic001G404800--Sobic001G047800 Sobic003G215700 Sobic003G215700 Sobic001G404800--Sobic003G215700 Sobic002G418400 Sobic002G418400 Sobic001G404800--Sobic002G418400 Sobic002G356400 Sobic002G356400 Sobic001G404800--Sobic002G356400 Sobic002G309700 Sobic002G309700 Sobic001G404800--Sobic002G309700 Sobic006G083500 Sobic006G083500 Sobic001G404800--Sobic006G083500 Sobic004G260200 Sobic004G260200 Sobic001G404800--Sobic004G260200 Sobic003G209000--Sobic004G259200 Sobic003G209000--Sobic001G404800 Sobic003G209000--Sobic002G418400 Sobic001G018500 Sobic001G018500 Sobic003G209000--Sobic001G018500 Sobic003G209000--Sobic006G083500 Sobic003G209000--Sobic003G215700 Sobic007G051000 Sobic007G051000 Sobic003G209000--Sobic007G051000 Sobic009G119900 Sobic009G119900 Sobic003G209000--Sobic009G119900 Sobic002G398901 Sobic002G398901 Sobic003G209000--Sobic002G398901 Sobic004G259200--Sobic003G209000 Sobic004G170400 Sobic004G170400 Sobic004G259200--Sobic004G170400 Sobic004G259200--Sobic001G404800 Sobic001G465800 Sobic001G465800 Sobic004G259200--Sobic001G465800 Sobic001G350600 Sobic001G350600 Sobic004G259200--Sobic001G350600 Sobic004G259200--Sobic002G418400 Sobic004G310300 Sobic004G310300 Sobic004G259200--Sobic004G310300 Sobic004G259200--Sobic009G119900 Sobic004G259200--Sobic002G356400 Sobic001G047800--Sobic002G309700 Sobic001G047800--Sobic003G215700 Sobic001G047800--Sobic002G418400 Sobic001G047800--Sobic004G260200 Sobic001G047800--Sobic001G404800 Sobic002G263100 Sobic002G263100 Sobic001G047800--Sobic002G263100 Sobic004G060500 Sobic004G060500 Sobic001G047800--Sobic004G060500 Sobic007G134900 Sobic007G134900 Sobic001G047800--Sobic007G134900 Sobic001G519000 Sobic001G519000 Sobic001G047800--Sobic001G519000 Sobic003G215700--Sobic006G083500 Sobic003G215700--Sobic002G418400 Sobic003G215700--Sobic001G047800 Sobic003G215700--Sobic003G209000 Sobic004G211833 Sobic004G211833 Sobic003G215700--Sobic004G211833 Sobic003G215700--Sobic001G404800 Sobic003G215700--Sobic004G060500 Sobic001G134400 Sobic001G134400 Sobic003G215700--Sobic001G134400 Sobic010G012500 Sobic010G012500 Sobic003G215700--Sobic010G012500 Sobic002G418400--Sobic006G083500 Sobic002G418400--Sobic003G215700 Sobic002G418400--Sobic003G209000 Sobic002G418400--Sobic002G398901 Sobic002G418400--Sobic004G211833 Sobic002G418400--Sobic010G012500 Sobic002G418400--Sobic001G047800 Sobic002G418400--Sobic004G259200 Sobic002G418400--Sobic001G404800 Sobic002G356400--Sobic002G309700 Sobic002G356400--Sobic001G465800 Sobic002G356400--Sobic009G119900 Sobic002G356400--Sobic001G350600 Sobic002G356400--Sobic004G170400 Sobic002G356400--Sobic004G260200 Sobic002G356400--Sobic001G404800 Sobic002G356400--Sobic004G259200 Sobic002G356400--Sobic003G209000 Sobic002G309700--Sobic004G260200 Sobic002G309700--Sobic001G047800 Sobic002G309700--Sobic002G356400 Sobic009G215300 Sobic009G215300 Sobic002G309700--Sobic009G215300 Sobic002G309700--Sobic001G404800 Sobic001G074700 Sobic001G074700 Sobic002G309700--Sobic001G074700 Sobic002G296200 Sobic002G296200 Sobic002G309700--Sobic002G296200 Sobic002G309700--Sobic001G465800 Sobic002G309700--Sobic003G215700 Sobic006G083500--Sobic004G211833 Sobic006G083500--Sobic010G012500 Sobic006G083500--Sobic003G215700 Sobic006G083500--Sobic002G418400 Sobic009G176000 Sobic009G176000 Sobic006G083500--Sobic009G176000 Sobic006G083500--Sobic002G398901 Sobic006G083500--Sobic003G209000 Sobic006G083500--Sobic007G051000 Sobic006G083500--Sobic001G134400 Sobic004G260200--Sobic002G309700 Sobic004G260200--Sobic001G047800 Sobic004G260200--Sobic001G465800 Sobic002G395000 Sobic002G395000 Sobic004G260200--Sobic002G395000 Sobic004G260200--Sobic002G356400 Sobic004G260200--Sobic001G404800 Sobic004G260200--Sobic009G215300 Sobic004G260200--Sobic002G263100 Sobic004G260200--Sobic001G074700
Octagon: transcription factors


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