Gene annotation
Transcriptome id Sobic.001G018500.1
Synonym Sb01g001810
Functional annotation expressed protein
UniProt C5WT22
Pfam PF04418
Panther DB PTHR21304 PTHR21304:SF0
NCBI CDD -
KEGG Orthology K17784; MINOS1, mitochondrial inner membrane organizing system protein 1
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G72170 : Domain of unknown function (DUF543)
RAP-DB (Rice) LOC_Os03g62420.1 : expressed protein
MaizeGDB (Corn) Zm00025a016356 , Zm00025a008972
Brachypodium KQK12214
Barley -
Wheat TraesCS5D02G524700 , TraesCS4A02G347700 , TraesCS5B02G525500
Populus -


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cDNA sequences
Sobic.001G018500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G209000 mitochondrial ATP synthase g subunit family protein, putative, expressed K02140: ATPeFG, ATP5L, F-type H+-transporting ATPase subunit g
2 Sobic.007G051000 mitochondrial NADH-ubiquinone oxidoreductase, putative, expressed K03939: NADH dehydrogenase (ubiquinone) Fe-S protein 6
3 Sobic.004G211833 - K02267: cytochrome c oxidase subunit 6b
4 Sobic.010G012500 ATOZI1, putative, expressed -
5 Sobic.004G259200 mitochondrial carrier protein, putative, expressed K05863: SLC25A4S, solute carrier family 25 (mitochondrial adenine nucleotide translocator), member 4/5/6/31
6 Sobic.004G310300 phosphate carrier protein, mitochondrial precursor, putative, expressed K15102: SLC25A3, PHC, solute carrier family 25 (mitochondrial phosphate transporter), member 3
7 Sobic.001G404800 CHCH domain containing protein, expressed K03952: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 8
8 Sobic.002G418400 ubiquinol-cytochrome c reductase complex 6.7 kDa protein, putative, expressed -
9 Sobic.009G076400 ribosomal protein L22, putative, expressed K02880: RP-L17e, large subunit ribosomal protein L17e
10 Sobic.004G280700 mitochondrial import inner membrane translocase subunit Tim, putative, expressed K17781: mitochondrial import inner membrane translocase subunit TIM13
11 Sobic.010G204500 peptidase, T1 family, putative, expressed K02735: 20S proteasome subunit beta 3
12 Sobic.002G398901 - -
13 Sobic.004G220000 kinase, pfkB family, putative, expressed K00856: E2.7.1.20, adenosine kinase
14 Sobic.009G119900 acyl carrier protein, putative, expressed K03955: NADH dehydrogenase (ubiquinone) 1 alpha/beta subcomplex 1, acyl-carrier protein
15 Sobic.002G190900 expressed protein -
16 Sobic.006G213000 ribosomal protein S17, putative, expressed K02949: RP-S11e, small subunit ribosomal protein S11e
17 Sobic.006G083500 SLL1 protein, putative, expressed -
18 Sobic.005G113300 -(PubMedID : 26976818)@serine hydroxymethyltransferase, mitochondrial precursor, putative, expressed K00600: glyA, glycine hydroxymethyltransferase
19 Sobic.002G379500 40S ribosomal protein S6, putative, expressed K02991: RP-S6e, small subunit ribosomal protein S6e
20 Sobic.002G056200 40S ribosomal protein S15, putative, expressed K02958: RP-S15e, small subunit ribosomal protein S15e


Gene co-expression network
sample Sobic001G018500 Sobic001G018500 Sobic003G209000 Sobic003G209000 Sobic001G018500--Sobic003G209000 Sobic007G051000 Sobic007G051000 Sobic001G018500--Sobic007G051000 Sobic004G211833 Sobic004G211833 Sobic001G018500--Sobic004G211833 Sobic010G012500 Sobic010G012500 Sobic001G018500--Sobic010G012500 Sobic004G259200 Sobic004G259200 Sobic001G018500--Sobic004G259200 Sobic004G310300 Sobic004G310300 Sobic001G018500--Sobic004G310300 Sobic001G404800 Sobic001G404800 Sobic001G018500--Sobic001G404800 Sobic002G418400 Sobic002G418400 Sobic001G018500--Sobic002G418400 Sobic009G076400 Sobic009G076400 Sobic001G018500--Sobic009G076400 Sobic003G209000--Sobic004G259200 Sobic003G209000--Sobic001G404800 Sobic003G209000--Sobic002G418400 Sobic003G209000--Sobic001G018500 Sobic006G083500 Sobic006G083500 Sobic003G209000--Sobic006G083500 Sobic003G215700 Sobic003G215700 Sobic003G209000--Sobic003G215700 Sobic003G209000--Sobic007G051000 Sobic009G119900 Sobic009G119900 Sobic003G209000--Sobic009G119900 Sobic002G398901 Sobic002G398901 Sobic003G209000--Sobic002G398901 Sobic007G051000--Sobic010G012500 Sobic009G176000 Sobic009G176000 Sobic007G051000--Sobic009G176000 Sobic007G051000--Sobic002G398901 Sobic007G051000--Sobic004G211833 Sobic002G190900 Sobic002G190900 Sobic007G051000--Sobic002G190900 Sobic007G051000--Sobic006G083500 Sobic007G051000--Sobic001G018500 Sobic007G051000--Sobic003G209000 Sobic010G204500 Sobic010G204500 Sobic007G051000--Sobic010G204500 Sobic004G211833--Sobic010G012500 Sobic004G211833--Sobic006G083500 Sobic004G211833--Sobic002G398901 Sobic004G220000 Sobic004G220000 Sobic004G211833--Sobic004G220000 Sobic004G211833--Sobic007G051000 Sobic004G211833--Sobic009G176000 Sobic004G211833--Sobic002G418400 Sobic004G211833--Sobic002G190900 Sobic004G211833--Sobic003G215700 Sobic010G012500--Sobic004G211833 Sobic010G012500--Sobic002G398901 Sobic010G012500--Sobic006G083500 Sobic010G012500--Sobic007G051000 Sobic010G012500--Sobic002G190900 Sobic010G012500--Sobic004G220000 Sobic010G012500--Sobic009G176000 Sobic002G375100 Sobic002G375100 Sobic010G012500--Sobic002G375100 Sobic010G012500--Sobic002G418400 Sobic004G259200--Sobic003G209000 Sobic004G170400 Sobic004G170400 Sobic004G259200--Sobic004G170400 Sobic004G259200--Sobic001G404800 Sobic001G465800 Sobic001G465800 Sobic004G259200--Sobic001G465800 Sobic001G350600 Sobic001G350600 Sobic004G259200--Sobic001G350600 Sobic004G259200--Sobic002G418400 Sobic004G259200--Sobic004G310300 Sobic004G259200--Sobic009G119900 Sobic002G356400 Sobic002G356400 Sobic004G259200--Sobic002G356400 Sobic004G310300--Sobic009G119900 Sobic004G310300--Sobic004G259200 Sobic004G310300--Sobic007G051000 Sobic004G310300--Sobic001G018500 Sobic004G310300--Sobic010G204500 Sobic003G155400 Sobic003G155400 Sobic004G310300--Sobic003G155400 Sobic004G066800 Sobic004G066800 Sobic004G310300--Sobic004G066800 Sobic001G513500 Sobic001G513500 Sobic004G310300--Sobic001G513500 Sobic005G188100 Sobic005G188100 Sobic004G310300--Sobic005G188100 Sobic001G404800--Sobic003G209000 Sobic001G404800--Sobic004G259200 Sobic001G047800 Sobic001G047800 Sobic001G404800--Sobic001G047800 Sobic001G404800--Sobic003G215700 Sobic001G404800--Sobic002G418400 Sobic001G404800--Sobic002G356400 Sobic002G309700 Sobic002G309700 Sobic001G404800--Sobic002G309700 Sobic001G404800--Sobic006G083500 Sobic004G260200 Sobic004G260200 Sobic001G404800--Sobic004G260200 Sobic002G418400--Sobic006G083500 Sobic002G418400--Sobic003G215700 Sobic002G418400--Sobic003G209000 Sobic002G418400--Sobic002G398901 Sobic002G418400--Sobic004G211833 Sobic002G418400--Sobic010G012500 Sobic002G418400--Sobic001G047800 Sobic002G418400--Sobic004G259200 Sobic002G418400--Sobic001G404800 Sobic006G213000 Sobic006G213000 Sobic009G076400--Sobic006G213000 Sobic007G019400 Sobic007G019400 Sobic009G076400--Sobic007G019400 Sobic003G387900 Sobic003G387900 Sobic009G076400--Sobic003G387900 Sobic007G053300 Sobic007G053300 Sobic009G076400--Sobic007G053300 Sobic006G137100 Sobic006G137100 Sobic009G076400--Sobic006G137100 Sobic001G226500 Sobic001G226500 Sobic009G076400--Sobic001G226500 Sobic002G255300 Sobic002G255300 Sobic009G076400--Sobic002G255300 Sobic003G249700 Sobic003G249700 Sobic009G076400--Sobic003G249700 Sobic004G008400 Sobic004G008400 Sobic009G076400--Sobic004G008400
Octagon: transcription factors


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