Gene annotation
Transcriptome id Sobic.004G280700.1
Synonym Sb04g031720, TIM13
Functional annotation mitochondrial import inner membrane translocase subunit Tim, putative, expressed
UniProt C5Y0X6
Pfam PF02953
Panther DB PTHR19338
NCBI CDD KOG1733; Mitochondrial import inner membrane translocase, subunit TIM13
KEGG Orthology K17781; mitochondrial import inner membrane translocase subunit TIM13
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G61570 : translocase of the inner mitochondrial membrane 13
RAP-DB (Rice) LOC_Os02g45820.1 : mitochondrial import inner membrane translocase subunit Tim, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQK00794
Barley -
Wheat TraesCS6D02G240500
Populus -


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cDNA sequences
Sobic.004G280700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G198400 60S ribosomal protein L6, putative, expressed K02934: RP-L6e, large subunit ribosomal protein L6e
2 Sobic.001G091801 - K02978: RP-S27e, small subunit ribosomal protein S27e
3 Sobic.009G215200 60S ribosomal protein L28-1, putative, expressed K02903: RP-L28e, large subunit ribosomal protein L28e
4 Sobic.009G166500 40S ribosomal protein S23, putative, expressed K02973: RP-S23e, small subunit ribosomal protein S23e
5 Sobic.006G213000 ribosomal protein S17, putative, expressed K02949: RP-S11e, small subunit ribosomal protein S11e
6 Sobic.009G050300 60S ribosomal protein L18-3, putative, expressed K02883: RP-L18e, large subunit ribosomal protein L18e
7 Sobic.006G047400 60S ribosomal protein L37a, putative, expressed K02921: RP-L37Ae, large subunit ribosomal protein L37Ae
8 Sobic.006G116700 60S ribosomal protein L6, putative, expressed K02934: RP-L6e, large subunit ribosomal protein L6e
9 Sobic.010G206200 ribosomal protein, putative, expressed K02955: RP-S14e, small subunit ribosomal protein S14e
10 Sobic.002G081600 ribosomal protein L7Ae, putative, expressed K02951: RP-S12e, small subunit ribosomal protein S12e
11 Sobic.007G019400 40S ribosomal protein S13, putative, expressed K02953: RP-S13e, small subunit ribosomal protein S13e
12 Sobic.009G163800 60S ribosomal protein L36-2, putative, expressed K02920: RP-L36e, large subunit ribosomal protein L36e
13 Sobic.001G130301 - K02971: RP-S21e, small subunit ribosomal protein S21e
14 Sobic.009G076400 ribosomal protein L22, putative, expressed K02880: RP-L17e, large subunit ribosomal protein L17e
15 Sobic.004G104100 ribosomal protein L5, putative, expressed K02868: RP-L11e, large subunit ribosomal protein L11e
16 Sobic.001G403500 40S ribosomal protein S7, putative, expressed K02993: RP-S7e, small subunit ribosomal protein S7e
17 Sobic.007G197800 60S ribosomal protein L32, putative, expressed K02912: RP-L32e, large subunit ribosomal protein L32e
18 Sobic.003G346600 40S ribosomal protein S23, putative, expressed K02973: RP-S23e, small subunit ribosomal protein S23e
19 Sobic.002G175100 60S ribosomal protein L44, putative, expressed K02929: RP-L44e, large subunit ribosomal protein L44e
20 Sobic.006G221200 60S ribosomal protein L27-3, putative, expressed K02901: RP-L27e, large subunit ribosomal protein L27e


Gene co-expression network
sample Sobic004G280700 Sobic004G280700 Sobic004G198400 Sobic004G198400 Sobic004G280700--Sobic004G198400 Sobic001G091801 Sobic001G091801 Sobic004G280700--Sobic001G091801 Sobic009G215200 Sobic009G215200 Sobic004G280700--Sobic009G215200 Sobic009G166500 Sobic009G166500 Sobic004G280700--Sobic009G166500 Sobic006G213000 Sobic006G213000 Sobic004G280700--Sobic006G213000 Sobic009G050300 Sobic009G050300 Sobic004G280700--Sobic009G050300 Sobic006G047400 Sobic006G047400 Sobic004G280700--Sobic006G047400 Sobic006G116700 Sobic006G116700 Sobic004G280700--Sobic006G116700 Sobic010G206200 Sobic010G206200 Sobic004G280700--Sobic010G206200 Sobic001G403500 Sobic001G403500 Sobic004G198400--Sobic001G403500 Sobic002G379500 Sobic002G379500 Sobic004G198400--Sobic002G379500 Sobic004G198400--Sobic009G050300 Sobic004G198400--Sobic010G206200 Sobic004G198400--Sobic004G280700 Sobic004G198400--Sobic006G213000 Sobic009G054800 Sobic009G054800 Sobic004G198400--Sobic009G054800 Sobic006G221200 Sobic006G221200 Sobic004G198400--Sobic006G221200 Sobic006G137100 Sobic006G137100 Sobic004G198400--Sobic006G137100 Sobic004G145801 Sobic004G145801 Sobic001G091801--Sobic004G145801 Sobic004G104100 Sobic004G104100 Sobic001G091801--Sobic004G104100 Sobic007G212600 Sobic007G212600 Sobic001G091801--Sobic007G212600 Sobic001G091801--Sobic009G050300 Sobic001G091801--Sobic009G166500 Sobic009G163800 Sobic009G163800 Sobic001G091801--Sobic009G163800 Sobic005G019700 Sobic005G019700 Sobic001G091801--Sobic005G019700 Sobic003G322400 Sobic003G322400 Sobic001G091801--Sobic003G322400 Sobic002G175100 Sobic002G175100 Sobic001G091801--Sobic002G175100 Sobic009G215200--Sobic006G116700 Sobic009G215200--Sobic009G050300 Sobic001G130301 Sobic001G130301 Sobic009G215200--Sobic001G130301 Sobic002G081600 Sobic002G081600 Sobic009G215200--Sobic002G081600 Sobic001G018900 Sobic001G018900 Sobic009G215200--Sobic001G018900 Sobic007G197800 Sobic007G197800 Sobic009G215200--Sobic007G197800 Sobic009G215200--Sobic001G403500 Sobic001G016400 Sobic001G016400 Sobic009G215200--Sobic001G016400 Sobic001G374700 Sobic001G374700 Sobic009G215200--Sobic001G374700 Sobic009G166500--Sobic006G047400 Sobic009G166500--Sobic009G163800 Sobic003G346600 Sobic003G346600 Sobic009G166500--Sobic003G346600 Sobic009G166500--Sobic009G050300 Sobic009G166500--Sobic001G091801 Sobic009G166500--Sobic002G081600 Sobic009G166500--Sobic001G374700 Sobic009G166500--Sobic001G403500 Sobic010G060500 Sobic010G060500 Sobic009G166500--Sobic010G060500 Sobic006G213000--Sobic006G137100 Sobic007G053300 Sobic007G053300 Sobic006G213000--Sobic007G053300 Sobic009G076400 Sobic009G076400 Sobic006G213000--Sobic009G076400 Sobic003G387900 Sobic003G387900 Sobic006G213000--Sobic003G387900 Sobic006G213000--Sobic002G379500 Sobic002G056200 Sobic002G056200 Sobic006G213000--Sobic002G056200 Sobic007G019400 Sobic007G019400 Sobic006G213000--Sobic007G019400 Sobic006G213000--Sobic002G081600 Sobic006G213000--Sobic001G403500 Sobic009G050300--Sobic006G116700 Sobic004G008400 Sobic004G008400 Sobic009G050300--Sobic004G008400 Sobic009G050300--Sobic007G197800 Sobic009G050300--Sobic002G081600 Sobic009G050300--Sobic003G346600 Sobic009G050300--Sobic009G215200 Sobic009G050300--Sobic001G403500 Sobic009G050300--Sobic001G018900 Sobic009G050300--Sobic002G379500 Sobic006G047400--Sobic009G166500 Sobic006G047400--Sobic001G374700 Sobic006G047400--Sobic009G163800 Sobic001G493001 Sobic001G493001 Sobic006G047400--Sobic001G493001 Sobic006G047400--Sobic002G175100 Sobic003G408100 Sobic003G408100 Sobic006G047400--Sobic003G408100 Sobic006G047400--Sobic001G091801 Sobic006G047400--Sobic001G130301 Sobic006G047400--Sobic009G215200 Sobic006G116700--Sobic009G050300 Sobic006G116700--Sobic007G197800 Sobic006G116700--Sobic009G215200 Sobic006G116700--Sobic001G018900 Sobic006G116700--Sobic002G081600 Sobic006G116700--Sobic004G008400 Sobic006G116700--Sobic001G130301 Sobic002G200600 Sobic002G200600 Sobic006G116700--Sobic002G200600 Sobic001G036900 Sobic001G036900 Sobic006G116700--Sobic001G036900 Sobic010G206200--Sobic009G050300 Sobic010G206200--Sobic009G054800 Sobic001G054900 Sobic001G054900 Sobic010G206200--Sobic001G054900 Sobic010G251600 Sobic010G251600 Sobic010G206200--Sobic010G251600 Sobic010G206200--Sobic009G215200 Sobic010G206200--Sobic001G403500 Sobic010G206200--Sobic003G408100 Sobic003G078200 Sobic003G078200 Sobic010G206200--Sobic003G078200 Sobic010G206200--Sobic007G019400
Octagon: transcription factors


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