Gene annotation
Transcriptome id Sobic.001G130301.1
Synonym -
Functional annotation -
UniProt A0A1Z5S5F3
Pfam PF01249
Panther DB PTHR10442
NCBI CDD KOG3486; 40S ribosomal protein S21
KEGG Orthology K02971; RP-S21e, small subunit ribosomal protein S21e
Gene Ontology GO:0006412; translation GO:0005840ribosome GO:0005622intracellular GO:0003735structural constituent of ribosome


Orthologs (automatic annotation)
TAIR AT5G27700 : Ribosomal protein S21e
RAP-DB (Rice) LOC_Os03g46490.1 : 40S ribosomal protein S21, putative, expressed
MaizeGDB (Corn) Zm00025a002413
Brachypodium PNT77430
Barley -
Wheat TraesCS4A02G139600 , TraesCS7B02G445200 , TraesCS4D02G167600 , TraesCS4B02G154700 , TraesCS2B02G059900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G215200 60S ribosomal protein L28-1, putative, expressed K02903: RP-L28e, large subunit ribosomal protein L28e
2 Sobic.007G197800 60S ribosomal protein L32, putative, expressed K02912: RP-L32e, large subunit ribosomal protein L32e
3 Sobic.006G116700 60S ribosomal protein L6, putative, expressed K02934: RP-L6e, large subunit ribosomal protein L6e
4 Sobic.001G018900 40S ribosomal protein S4, putative, expressed K02987: RP-S4e, small subunit ribosomal protein S4e
5 Sobic.001G493001 - K02979: RP-S28e, small subunit ribosomal protein S28e
6 Sobic.001G402050 - K02979: RP-S28e, small subunit ribosomal protein S28e
7 Sobic.009G050300 60S ribosomal protein L18-3, putative, expressed K02883: RP-L18e, large subunit ribosomal protein L18e
8 Sobic.002G200600 60S ribosomal protein L34, putative, expressed K02915: RP-L34e, large subunit ribosomal protein L34e
9 Sobic.001G374700 40S ribosomal protein S21, putative, expressed K02971: RP-S21e, small subunit ribosomal protein S21e
10 Sobic.010G206200 ribosomal protein, putative, expressed K02955: RP-S14e, small subunit ribosomal protein S14e
11 Sobic.006G047400 60S ribosomal protein L37a, putative, expressed K02921: RP-L37Ae, large subunit ribosomal protein L37Ae
12 Sobic.002G081600 ribosomal protein L7Ae, putative, expressed K02951: RP-S12e, small subunit ribosomal protein S12e
13 Sobic.006G067800 60S acidic ribosomal protein, putative, expressed K02943: RP-LP2, large subunit ribosomal protein LP2
14 Sobic.002G175100 60S ribosomal protein L44, putative, expressed K02929: RP-L44e, large subunit ribosomal protein L44e
15 Sobic.001G226500 60S ribosomal protein L21-2, putative, expressed K02889: RP-L21e, large subunit ribosomal protein L21e
16 Sobic.004G008400 ribosomal protein L37, putative, expressed K02922: RP-L37e, large subunit ribosomal protein L37e
17 Sobic.005G019700 ribosomal protein, putative, expressed K02960: RP-S16e, small subunit ribosomal protein S16e
18 Sobic.003G346600 40S ribosomal protein S23, putative, expressed K02973: RP-S23e, small subunit ribosomal protein S23e
19 Sobic.009G166500 40S ribosomal protein S23, putative, expressed K02973: RP-S23e, small subunit ribosomal protein S23e
20 Sobic.003G125650 - K02183: calmodulin


Gene co-expression network
sample Sobic001G130301 Sobic001G130301 Sobic009G215200 Sobic009G215200 Sobic001G130301--Sobic009G215200 Sobic007G197800 Sobic007G197800 Sobic001G130301--Sobic007G197800 Sobic006G116700 Sobic006G116700 Sobic001G130301--Sobic006G116700 Sobic001G018900 Sobic001G018900 Sobic001G130301--Sobic001G018900 Sobic001G493001 Sobic001G493001 Sobic001G130301--Sobic001G493001 Sobic001G402050 Sobic001G402050 Sobic001G130301--Sobic001G402050 Sobic009G050300 Sobic009G050300 Sobic001G130301--Sobic009G050300 Sobic002G200600 Sobic002G200600 Sobic001G130301--Sobic002G200600 Sobic001G374700 Sobic001G374700 Sobic001G130301--Sobic001G374700 Sobic009G215200--Sobic006G116700 Sobic009G215200--Sobic009G050300 Sobic009G215200--Sobic001G130301 Sobic002G081600 Sobic002G081600 Sobic009G215200--Sobic002G081600 Sobic009G215200--Sobic001G018900 Sobic009G215200--Sobic007G197800 Sobic001G403500 Sobic001G403500 Sobic009G215200--Sobic001G403500 Sobic001G016400 Sobic001G016400 Sobic009G215200--Sobic001G016400 Sobic009G215200--Sobic001G374700 Sobic007G197800--Sobic006G116700 Sobic007G197800--Sobic009G050300 Sobic007G197800--Sobic001G130301 Sobic007G197800--Sobic001G018900 Sobic007G197800--Sobic009G215200 Sobic007G197800--Sobic001G402050 Sobic007G197800--Sobic001G016400 Sobic007G197800--Sobic001G403500 Sobic004G008400 Sobic004G008400 Sobic007G197800--Sobic004G008400 Sobic006G116700--Sobic009G050300 Sobic006G116700--Sobic007G197800 Sobic006G116700--Sobic009G215200 Sobic006G116700--Sobic001G018900 Sobic006G116700--Sobic002G081600 Sobic006G116700--Sobic004G008400 Sobic006G116700--Sobic001G130301 Sobic006G116700--Sobic002G200600 Sobic001G036900 Sobic001G036900 Sobic006G116700--Sobic001G036900 Sobic001G018900--Sobic006G116700 Sobic001G018900--Sobic009G215200 Sobic001G018900--Sobic009G050300 Sobic001G018900--Sobic001G036900 Sobic001G018900--Sobic007G197800 Sobic002G375100 Sobic002G375100 Sobic001G018900--Sobic002G375100 Sobic001G018900--Sobic001G130301 Sobic001G018900--Sobic001G016400 Sobic003G408100 Sobic003G408100 Sobic001G018900--Sobic003G408100 Sobic001G493001--Sobic001G130301 Sobic001G493001--Sobic001G374700 Sobic006G047400 Sobic006G047400 Sobic001G493001--Sobic006G047400 Sobic007G184600 Sobic007G184600 Sobic001G493001--Sobic007G184600 Sobic001G493001--Sobic001G402050 Sobic001G493001--Sobic009G050300 Sobic001G493001--Sobic001G018900 Sobic001G493001--Sobic002G081600 Sobic001G493001--Sobic002G200600 Sobic001G402050--Sobic002G200600 Sobic001G402050--Sobic001G374700 Sobic001G402050--Sobic007G184600 Sobic001G402050--Sobic007G197800 Sobic006G067800 Sobic006G067800 Sobic001G402050--Sobic006G067800 Sobic001G402050--Sobic001G016400 Sobic001G402050--Sobic009G215200 Sobic001G402050--Sobic001G130301 Sobic001G402050--Sobic001G493001 Sobic009G050300--Sobic006G116700 Sobic009G050300--Sobic004G008400 Sobic009G050300--Sobic007G197800 Sobic009G050300--Sobic002G081600 Sobic003G346600 Sobic003G346600 Sobic009G050300--Sobic003G346600 Sobic009G050300--Sobic009G215200 Sobic009G050300--Sobic001G403500 Sobic009G050300--Sobic001G018900 Sobic002G379500 Sobic002G379500 Sobic009G050300--Sobic002G379500 Sobic002G200600--Sobic007G184600 Sobic002G200600--Sobic001G402050 Sobic002G200600--Sobic006G067800 Sobic002G200600--Sobic006G116700 Sobic002G200600--Sobic002G081600 Sobic002G200600--Sobic007G197800 Sobic002G200600--Sobic001G374700 Sobic002G200600--Sobic001G018900 Sobic002G200600--Sobic001G130301 Sobic002G175100 Sobic002G175100 Sobic001G374700--Sobic002G175100 Sobic001G374700--Sobic007G184600 Sobic001G374700--Sobic001G402050 Sobic001G374700--Sobic002G081600 Sobic001G374700--Sobic006G047400 Sobic001G374700--Sobic009G215200 Sobic001G374700--Sobic002G200600 Sobic001G374700--Sobic006G116700 Sobic001G374700--Sobic001G493001
Octagon: transcription factors


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