Gene annotation
Transcriptome id Sobic.010G206200.1
Synonym Sb10g025340
Functional annotation ribosomal protein, putative, expressed
UniProt -
Pfam PF00411
Panther DB PTHR11759 PTHR11759:SF11
NCBI CDD KOG0407; 40S ribosomal protein S14
KEGG Orthology K02955; RP-S14e, small subunit ribosomal protein S14e
Gene Ontology GO:0006412; translation GO:0005840ribosome GO:0003735structural constituent of ribosome


Orthologs (automatic annotation)
TAIR AT3G52580 : Ribosomal protein S11 family protein
RAP-DB (Rice) LOC_Os02g06700.2 : ribosomal protein, putative, expressed
MaizeGDB (Corn) Zm00025a041877 , Zm00025a041876 , Zm00025a041875 , Zm00025a051381 , Zm00025a018134
Brachypodium KQJ93475 , KQK17170
Barley HORVU7Hr1G091030.1 , HORVU7Hr1G104220.6 , HORVU7Hr1G104220.4 , HORVU7Hr1G104220.5 , HORVU7Hr1G104220.2 , HORVU7Hr1G104220.3 , HORVU7Hr1G104220.1 , HORVU1Hr1G076240.1 , HORVU1Hr1G076240.2 , HORVU6Hr1G085630.1 , HORVU1Hr1G058980.1
Wheat TraesCS6A02G137300 , TraesCS2B02G312000 , TraesCS2D02G293300 , TraesCS7B02G355300 , TraesCS6D02G126300 , TraesCS2D02G293400 , TraesCS6B02G165600 , TraesCS2A02G295600
Populus -


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cDNA sequences
Sobic.010G206200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G050300 60S ribosomal protein L18-3, putative, expressed K02883: RP-L18e, large subunit ribosomal protein L18e
2 Sobic.009G054800 40S ribosomal protein S27a, putative, expressed K02977: RP-S27Ae, RPS27A, ubiquitin-small subunit ribosomal protein S27Ae
3 Sobic.001G054900 40S ribosomal protein S15, putative, expressed K02958: RP-S15e, small subunit ribosomal protein S15e
4 Sobic.010G251600 60S acidic ribosomal protein, putative, expressed K02942: RP-LP1, large subunit ribosomal protein LP1
5 Sobic.009G215200 60S ribosomal protein L28-1, putative, expressed K02903: RP-L28e, large subunit ribosomal protein L28e
6 Sobic.001G403500 40S ribosomal protein S7, putative, expressed K02993: RP-S7e, small subunit ribosomal protein S7e
7 Sobic.003G408100 ribosomal protein L13, putative, expressed K02873: RP-L13e, large subunit ribosomal protein L13e
8 Sobic.003G078200 ribosomal protein L24, putative, expressed K02898: RP-L26e, large subunit ribosomal protein L26e
9 Sobic.007G019400 40S ribosomal protein S13, putative, expressed K02953: RP-S13e, small subunit ribosomal protein S13e
10 Sobic.004G198400 60S ribosomal protein L6, putative, expressed K02934: RP-L6e, large subunit ribosomal protein L6e
11 Sobic.006G116700 60S ribosomal protein L6, putative, expressed K02934: RP-L6e, large subunit ribosomal protein L6e
12 Sobic.005G019700 ribosomal protein, putative, expressed K02960: RP-S16e, small subunit ribosomal protein S16e
13 Sobic.001G018900 40S ribosomal protein S4, putative, expressed K02987: RP-S4e, small subunit ribosomal protein S4e
14 Sobic.001G130301 - K02971: RP-S21e, small subunit ribosomal protein S21e
15 Sobic.007G178600 - K02966: RP-S19e, small subunit ribosomal protein S19e
16 Sobic.001G376600 60S ribosomal protein L22-2, putative, expressed K02891: RP-L22e, large subunit ribosomal protein L22e
17 Sobic.001G175300 ribosomal protein L24, putative, expressed K02896: RP-L24e, large subunit ribosomal protein L24e
18 Sobic.001G091801 - K02978: RP-S27e, small subunit ribosomal protein S27e
19 Sobic.008G108601 - K02980: RP-S29e, small subunit ribosomal protein S29e
20 Sobic.007G138700 60S ribosomal protein L34, putative, expressed K02915: RP-L34e, large subunit ribosomal protein L34e


Gene co-expression network
sample Sobic010G206200 Sobic010G206200 Sobic009G050300 Sobic009G050300 Sobic010G206200--Sobic009G050300 Sobic009G054800 Sobic009G054800 Sobic010G206200--Sobic009G054800 Sobic001G054900 Sobic001G054900 Sobic010G206200--Sobic001G054900 Sobic010G251600 Sobic010G251600 Sobic010G206200--Sobic010G251600 Sobic009G215200 Sobic009G215200 Sobic010G206200--Sobic009G215200 Sobic001G403500 Sobic001G403500 Sobic010G206200--Sobic001G403500 Sobic003G408100 Sobic003G408100 Sobic010G206200--Sobic003G408100 Sobic003G078200 Sobic003G078200 Sobic010G206200--Sobic003G078200 Sobic007G019400 Sobic007G019400 Sobic010G206200--Sobic007G019400 Sobic006G116700 Sobic006G116700 Sobic009G050300--Sobic006G116700 Sobic004G008400 Sobic004G008400 Sobic009G050300--Sobic004G008400 Sobic007G197800 Sobic007G197800 Sobic009G050300--Sobic007G197800 Sobic002G081600 Sobic002G081600 Sobic009G050300--Sobic002G081600 Sobic003G346600 Sobic003G346600 Sobic009G050300--Sobic003G346600 Sobic009G050300--Sobic009G215200 Sobic009G050300--Sobic001G403500 Sobic001G018900 Sobic001G018900 Sobic009G050300--Sobic001G018900 Sobic002G379500 Sobic002G379500 Sobic009G050300--Sobic002G379500 Sobic009G054800--Sobic003G078200 Sobic009G054800--Sobic010G206200 Sobic002G372400 Sobic002G372400 Sobic009G054800--Sobic002G372400 Sobic005G019700 Sobic005G019700 Sobic009G054800--Sobic005G019700 Sobic009G054800--Sobic007G197800 Sobic010G230700 Sobic010G230700 Sobic009G054800--Sobic010G230700 Sobic009G054800--Sobic009G050300 Sobic004G198400 Sobic004G198400 Sobic009G054800--Sobic004G198400 Sobic009G054800--Sobic006G116700 Sobic001G054900--Sobic003G408100 Sobic001G054900--Sobic010G206200 Sobic001G054900--Sobic009G050300 Sobic001G054900--Sobic006G116700 Sobic007G019000 Sobic007G019000 Sobic001G054900--Sobic007G019000 Sobic009G163800 Sobic009G163800 Sobic001G054900--Sobic009G163800 Sobic001G036900 Sobic001G036900 Sobic001G054900--Sobic001G036900 Sobic001G054900--Sobic001G018900 Sobic001G091801 Sobic001G091801 Sobic001G054900--Sobic001G091801 Sobic010G251600--Sobic010G206200 Sobic010G251600--Sobic007G019400 Sobic003G436700 Sobic003G436700 Sobic010G251600--Sobic003G436700 Sobic007G178600 Sobic007G178600 Sobic010G251600--Sobic007G178600 Sobic010G251600--Sobic009G215200 Sobic010G251600--Sobic006G116700 Sobic010G251600--Sobic003G078200 Sobic010G251600--Sobic001G054900 Sobic004G331400 Sobic004G331400 Sobic010G251600--Sobic004G331400 Sobic009G215200--Sobic006G116700 Sobic009G215200--Sobic009G050300 Sobic001G130301 Sobic001G130301 Sobic009G215200--Sobic001G130301 Sobic009G215200--Sobic002G081600 Sobic009G215200--Sobic001G018900 Sobic009G215200--Sobic007G197800 Sobic009G215200--Sobic001G403500 Sobic001G016400 Sobic001G016400 Sobic009G215200--Sobic001G016400 Sobic001G374700 Sobic001G374700 Sobic009G215200--Sobic001G374700 Sobic001G403500--Sobic009G050300 Sobic001G403500--Sobic004G198400 Sobic001G403500--Sobic009G215200 Sobic001G403500--Sobic002G379500 Sobic001G403500--Sobic007G197800 Sobic001G403500--Sobic002G081600 Sobic006G137100 Sobic006G137100 Sobic001G403500--Sobic006G137100 Sobic001G403500--Sobic006G116700 Sobic001G403500--Sobic010G206200 Sobic003G408100--Sobic001G054900 Sobic003G152600 Sobic003G152600 Sobic003G408100--Sobic003G152600 Sobic003G408100--Sobic001G018900 Sobic003G408100--Sobic009G163800 Sobic003G408100--Sobic006G116700 Sobic003G408100--Sobic010G206200 Sobic003G408100--Sobic009G050300 Sobic003G408100--Sobic001G036900 Sobic003G408100--Sobic009G215200 Sobic003G078200--Sobic002G372400 Sobic003G078200--Sobic009G054800 Sobic003G078200--Sobic010G206200 Sobic003G078200--Sobic005G019700 Sobic003G078200--Sobic007G197800 Sobic007G018300 Sobic007G018300 Sobic003G078200--Sobic007G018300 Sobic003G078200--Sobic009G050300 Sobic003G078200--Sobic001G018900 Sobic003G078200--Sobic006G116700 Sobic003G249700 Sobic003G249700 Sobic007G019400--Sobic003G249700 Sobic009G076400 Sobic009G076400 Sobic007G019400--Sobic009G076400 Sobic002G047600 Sobic002G047600 Sobic007G019400--Sobic002G047600 Sobic007G019400--Sobic010G251600 Sobic007G019400--Sobic010G206200 Sobic006G213000 Sobic006G213000 Sobic007G019400--Sobic006G213000 Sobic003G387900 Sobic003G387900 Sobic007G019400--Sobic003G387900 Sobic002G056200 Sobic002G056200 Sobic007G019400--Sobic002G056200 Sobic001G226500 Sobic001G226500 Sobic007G019400--Sobic001G226500
Octagon: transcription factors


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