Gene annotation
Transcriptome id Sobic.001G175300.1
Synonym RPL24A, Sb01g015240
Functional annotation ribosomal protein L24, putative, expressed
UniProt C5WTA2
Pfam PF01246
Panther DB PTHR10792 PTHR10792:SF11
NCBI CDD KOG1722; 60s ribosomal protein L24
KEGG Orthology K02896; RP-L24e, large subunit ribosomal protein L24e
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G36620 : ribosomal protein L24
RAP-DB (Rice) LOC_Os05g40820.2 : ribosomal protein L24, putative, expressed
MaizeGDB (Corn) Zm00025a017338 , Zm00025a007171 , Zm00025a037804
Brachypodium KQK10303 , KQJ98758 , KQK12510 , KQK10304
Barley HORVU5Hr1G111510.4 , HORVU5Hr1G111510.5 , HORVU5Hr1G111510.1 , HORVU5Hr1G111510.2 , HORVU5Hr1G111510.3 , HORVU5Hr1G111570.2 , HORVU3Hr1G080130.1 , HORVU3Hr1G080130.3 , HORVU3Hr1G080130.2 , HORVU3Hr1G080130.4
Wheat TraesCS5B02G480700 , TraesCS5A02G468100 , TraesCS3D02G332800 , TraesCS5A02G468000 , TraesCS5D02G481100 , TraesCS3A02G339200 , TraesCS3B02G370900 , TraesCS5B02G480800
Populus -


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cDNA sequences
Sobic.001G175300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G206200 ribosomal protein, putative, expressed K02955: RP-S14e, small subunit ribosomal protein S14e
2 Sobic.001G403500 40S ribosomal protein S7, putative, expressed K02993: RP-S7e, small subunit ribosomal protein S7e
3 Sobic.004G198400 60S ribosomal protein L6, putative, expressed K02934: RP-L6e, large subunit ribosomal protein L6e
4 Sobic.009G050300 60S ribosomal protein L18-3, putative, expressed K02883: RP-L18e, large subunit ribosomal protein L18e
5 Sobic.003G078200 ribosomal protein L24, putative, expressed K02898: RP-L26e, large subunit ribosomal protein L26e
6 Sobic.009G054800 40S ribosomal protein S27a, putative, expressed K02977: RP-S27Ae, RPS27A, ubiquitin-small subunit ribosomal protein S27Ae
7 Sobic.002G286900 ribosomal protein L14, putative, expressed K02875: RP-L14e, large subunit ribosomal protein L14e
8 Sobic.009G242300 60S acidic ribosomal protein, putative, expressed K02943: RP-LP2, large subunit ribosomal protein LP2
9 Sobic.002G372400 60S ribosomal protein, putative, expressed K02900: RP-L27Ae, large subunit ribosomal protein L27Ae
10 Sobic.007G138700 60S ribosomal protein L34, putative, expressed K02915: RP-L34e, large subunit ribosomal protein L34e
11 Sobic.004G008400 ribosomal protein L37, putative, expressed K02922: RP-L37e, large subunit ribosomal protein L37e
12 Sobic.005G019700 ribosomal protein, putative, expressed K02960: RP-S16e, small subunit ribosomal protein S16e
13 Sobic.001G508900 60S ribosomal protein L21-2, putative, expressed K02889: RP-L21e, large subunit ribosomal protein L21e
14 Sobic.001G226500 60S ribosomal protein L21-2, putative, expressed K02889: RP-L21e, large subunit ribosomal protein L21e
15 Sobic.002G379500 40S ribosomal protein S6, putative, expressed K02991: RP-S6e, small subunit ribosomal protein S6e
16 Sobic.009G215200 60S ribosomal protein L28-1, putative, expressed K02903: RP-L28e, large subunit ribosomal protein L28e
17 Sobic.008G108601 - K02980: RP-S29e, small subunit ribosomal protein S29e
18 Sobic.007G197800 60S ribosomal protein L32, putative, expressed K02912: RP-L32e, large subunit ribosomal protein L32e
19 Sobic.001G018900 40S ribosomal protein S4, putative, expressed K02987: RP-S4e, small subunit ribosomal protein S4e
20 Sobic.004G271400 L11 domain containing ribosomal protein, putative, expressed K02870: RP-L12e, large subunit ribosomal protein L12e


Gene co-expression network
sample Sobic001G175300 Sobic001G175300 Sobic010G206200 Sobic010G206200 Sobic001G175300--Sobic010G206200 Sobic001G403500 Sobic001G403500 Sobic001G175300--Sobic001G403500 Sobic004G198400 Sobic004G198400 Sobic001G175300--Sobic004G198400 Sobic009G050300 Sobic009G050300 Sobic001G175300--Sobic009G050300 Sobic003G078200 Sobic003G078200 Sobic001G175300--Sobic003G078200 Sobic009G054800 Sobic009G054800 Sobic001G175300--Sobic009G054800 Sobic002G286900 Sobic002G286900 Sobic001G175300--Sobic002G286900 Sobic009G242300 Sobic009G242300 Sobic001G175300--Sobic009G242300 Sobic002G372400 Sobic002G372400 Sobic001G175300--Sobic002G372400 Sobic010G206200--Sobic009G050300 Sobic010G206200--Sobic009G054800 Sobic001G054900 Sobic001G054900 Sobic010G206200--Sobic001G054900 Sobic010G251600 Sobic010G251600 Sobic010G206200--Sobic010G251600 Sobic009G215200 Sobic009G215200 Sobic010G206200--Sobic009G215200 Sobic010G206200--Sobic001G403500 Sobic003G408100 Sobic003G408100 Sobic010G206200--Sobic003G408100 Sobic010G206200--Sobic003G078200 Sobic007G019400 Sobic007G019400 Sobic010G206200--Sobic007G019400 Sobic001G403500--Sobic009G050300 Sobic001G403500--Sobic004G198400 Sobic001G403500--Sobic009G215200 Sobic002G379500 Sobic002G379500 Sobic001G403500--Sobic002G379500 Sobic007G197800 Sobic007G197800 Sobic001G403500--Sobic007G197800 Sobic002G081600 Sobic002G081600 Sobic001G403500--Sobic002G081600 Sobic006G137100 Sobic006G137100 Sobic001G403500--Sobic006G137100 Sobic006G116700 Sobic006G116700 Sobic001G403500--Sobic006G116700 Sobic001G403500--Sobic010G206200 Sobic004G198400--Sobic001G403500 Sobic004G198400--Sobic002G379500 Sobic004G198400--Sobic009G050300 Sobic004G198400--Sobic010G206200 Sobic004G280700 Sobic004G280700 Sobic004G198400--Sobic004G280700 Sobic006G213000 Sobic006G213000 Sobic004G198400--Sobic006G213000 Sobic004G198400--Sobic009G054800 Sobic006G221200 Sobic006G221200 Sobic004G198400--Sobic006G221200 Sobic004G198400--Sobic006G137100 Sobic009G050300--Sobic006G116700 Sobic004G008400 Sobic004G008400 Sobic009G050300--Sobic004G008400 Sobic009G050300--Sobic007G197800 Sobic009G050300--Sobic002G081600 Sobic003G346600 Sobic003G346600 Sobic009G050300--Sobic003G346600 Sobic009G050300--Sobic009G215200 Sobic009G050300--Sobic001G403500 Sobic001G018900 Sobic001G018900 Sobic009G050300--Sobic001G018900 Sobic009G050300--Sobic002G379500 Sobic003G078200--Sobic002G372400 Sobic003G078200--Sobic009G054800 Sobic003G078200--Sobic010G206200 Sobic005G019700 Sobic005G019700 Sobic003G078200--Sobic005G019700 Sobic003G078200--Sobic007G197800 Sobic007G018300 Sobic007G018300 Sobic003G078200--Sobic007G018300 Sobic003G078200--Sobic009G050300 Sobic003G078200--Sobic001G018900 Sobic003G078200--Sobic006G116700 Sobic009G054800--Sobic003G078200 Sobic009G054800--Sobic010G206200 Sobic009G054800--Sobic002G372400 Sobic009G054800--Sobic005G019700 Sobic009G054800--Sobic007G197800 Sobic010G230700 Sobic010G230700 Sobic009G054800--Sobic010G230700 Sobic009G054800--Sobic009G050300 Sobic009G054800--Sobic004G198400 Sobic009G054800--Sobic006G116700 Sobic002G286900--Sobic006G137100 Sobic008G108601 Sobic008G108601 Sobic002G286900--Sobic008G108601 Sobic002G286900--Sobic004G008400 Sobic002G286900--Sobic009G050300 Sobic001G226500 Sobic001G226500 Sobic002G286900--Sobic001G226500 Sobic002G286900--Sobic001G403500 Sobic003G249700 Sobic003G249700 Sobic002G286900--Sobic003G249700 Sobic005G110800 Sobic005G110800 Sobic002G286900--Sobic005G110800 Sobic007G178600 Sobic007G178600 Sobic002G286900--Sobic007G178600 Sobic009G242300--Sobic001G175300 Sobic009G242300--Sobic007G197800 Sobic006G067800 Sobic006G067800 Sobic009G242300--Sobic006G067800 Sobic009G242300--Sobic009G050300 Sobic009G242300--Sobic004G008400 Sobic009G242300--Sobic002G379500 Sobic009G242300--Sobic001G018900 Sobic001G402050 Sobic001G402050 Sobic009G242300--Sobic001G402050 Sobic009G242300--Sobic002G286900 Sobic002G372400--Sobic003G078200 Sobic002G372400--Sobic009G054800 Sobic010G076400 Sobic010G076400 Sobic002G372400--Sobic010G076400 Sobic002G372400--Sobic010G230700 Sobic002G372400--Sobic007G018300 Sobic002G372400--Sobic005G019700 Sobic009G223300 Sobic009G223300 Sobic002G372400--Sobic009G223300 Sobic002G372400--Sobic009G050300 Sobic002G372400--Sobic004G198400
Octagon: transcription factors


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