Gene annotation
Transcriptome id Sobic.002G286900.1
Synonym Sb02g031930
Functional annotation ribosomal protein L14, putative, expressed
UniProt C5X7L1
Pfam PF01929
Panther DB PTHR11127 PTHR11127:SF3
NCBI CDD KOG3421; 60S ribosomal protein L14
KEGG Orthology K02875; RP-L14e, large subunit ribosomal protein L14e
Gene Ontology GO:0006412; translation GO:0005840ribosome GO:0005622intracellular GO:0003735structural constituent of ribosome


Orthologs (automatic annotation)
TAIR AT2G20450 : Ribosomal protein L14
RAP-DB (Rice) LOC_Os02g40880.1 : ribosomal protein L14, putative, expressed
MaizeGDB (Corn) Zm00025a056507 , Zm00025a047972 , Zm00025a014503
Brachypodium KQJ83571 , KQK12844
Barley HORVU2Hr1G089070.2 , HORVU2Hr1G089070.1 , HORVU2Hr1G089090.1 , HORVU6Hr1G058560.2 , HORVU6Hr1G058560.3 , HORVU6Hr1G058560.1
Wheat TraesCS6D02G209400 , TraesCS2B02G400600 , TraesCS6A02G224600 , TraesCS2A02G383600 , TraesCS6B02G256900
Populus -


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cDNA sequences
Sobic.002G286900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G137100 60S ribosomal protein L23A, putative, expressed K02893: RP-L23Ae, large subunit ribosomal protein L23Ae
2 Sobic.008G108601 - K02980: RP-S29e, small subunit ribosomal protein S29e
3 Sobic.004G008400 ribosomal protein L37, putative, expressed K02922: RP-L37e, large subunit ribosomal protein L37e
4 Sobic.009G050300 60S ribosomal protein L18-3, putative, expressed K02883: RP-L18e, large subunit ribosomal protein L18e
5 Sobic.001G226500 60S ribosomal protein L21-2, putative, expressed K02889: RP-L21e, large subunit ribosomal protein L21e
6 Sobic.001G403500 40S ribosomal protein S7, putative, expressed K02993: RP-S7e, small subunit ribosomal protein S7e
7 Sobic.003G249700 60S ribosomal protein L18a, putative, expressed K02882: RP-L18Ae, large subunit ribosomal protein L18Ae
8 Sobic.005G110800 - -
9 Sobic.007G178600 - K02966: RP-S19e, small subunit ribosomal protein S19e
10 Sobic.003G387900 ribosomal L18p/L5e family protein, putative, expressed K02932: RP-L5e, large subunit ribosomal protein L5e
11 Sobic.009G166500 40S ribosomal protein S23, putative, expressed K02973: RP-S23e, small subunit ribosomal protein S23e
12 Sobic.010G060500 60S ribosomal protein L23A, putative, expressed K02893: RP-L23Ae, large subunit ribosomal protein L23Ae
13 Sobic.003G346600 40S ribosomal protein S23, putative, expressed K02973: RP-S23e, small subunit ribosomal protein S23e
14 Sobic.007G138700 60S ribosomal protein L34, putative, expressed K02915: RP-L34e, large subunit ribosomal protein L34e
15 Sobic.001G175300 ribosomal protein L24, putative, expressed K02896: RP-L24e, large subunit ribosomal protein L24e
16 Sobic.002G379500 40S ribosomal protein S6, putative, expressed K02991: RP-S6e, small subunit ribosomal protein S6e
17 Sobic.002G047600 60S ribosomal protein L15, putative, expressed K02877: RP-L15e, large subunit ribosomal protein L15e
18 Sobic.003G018600 LSM domain containing protein, expressed K11097: SNRPE, small nuclear ribonucleoprotein E
19 Sobic.010G206200 ribosomal protein, putative, expressed K02955: RP-S14e, small subunit ribosomal protein S14e
20 Sobic.002G049300 ribosomal protein S13p/S18e, putative, expressed K02964: RP-S18e, small subunit ribosomal protein S18e


Gene co-expression network
sample Sobic002G286900 Sobic002G286900 Sobic006G137100 Sobic006G137100 Sobic002G286900--Sobic006G137100 Sobic008G108601 Sobic008G108601 Sobic002G286900--Sobic008G108601 Sobic004G008400 Sobic004G008400 Sobic002G286900--Sobic004G008400 Sobic009G050300 Sobic009G050300 Sobic002G286900--Sobic009G050300 Sobic001G226500 Sobic001G226500 Sobic002G286900--Sobic001G226500 Sobic001G403500 Sobic001G403500 Sobic002G286900--Sobic001G403500 Sobic003G249700 Sobic003G249700 Sobic002G286900--Sobic003G249700 Sobic005G110800 Sobic005G110800 Sobic002G286900--Sobic005G110800 Sobic007G178600 Sobic007G178600 Sobic002G286900--Sobic007G178600 Sobic006G213000 Sobic006G213000 Sobic006G137100--Sobic006G213000 Sobic003G387900 Sobic003G387900 Sobic006G137100--Sobic003G387900 Sobic002G056200 Sobic002G056200 Sobic006G137100--Sobic002G056200 Sobic006G137100--Sobic009G050300 Sobic003G346600 Sobic003G346600 Sobic006G137100--Sobic003G346600 Sobic006G137100--Sobic001G403500 Sobic010G060500 Sobic010G060500 Sobic006G137100--Sobic010G060500 Sobic006G137100--Sobic004G008400 Sobic002G047600 Sobic002G047600 Sobic006G137100--Sobic002G047600 Sobic008G108601--Sobic007G178600 Sobic008G108601--Sobic004G008400 Sobic008G108601--Sobic002G286900 Sobic008G108601--Sobic003G249700 Sobic008G108601--Sobic002G047600 Sobic007G019400 Sobic007G019400 Sobic008G108601--Sobic007G019400 Sobic010G206200 Sobic010G206200 Sobic008G108601--Sobic010G206200 Sobic002G049300 Sobic002G049300 Sobic008G108601--Sobic002G049300 Sobic008G108601--Sobic001G226500 Sobic004G008400--Sobic009G050300 Sobic004G008400--Sobic007G178600 Sobic004G008400--Sobic003G346600 Sobic006G116700 Sobic006G116700 Sobic004G008400--Sobic006G116700 Sobic002G255300 Sobic002G255300 Sobic004G008400--Sobic002G255300 Sobic007G197800 Sobic007G197800 Sobic004G008400--Sobic007G197800 Sobic003G436700 Sobic003G436700 Sobic004G008400--Sobic003G436700 Sobic004G008400--Sobic006G137100 Sobic002G379500 Sobic002G379500 Sobic004G008400--Sobic002G379500 Sobic009G050300--Sobic006G116700 Sobic009G050300--Sobic004G008400 Sobic009G050300--Sobic007G197800 Sobic002G081600 Sobic002G081600 Sobic009G050300--Sobic002G081600 Sobic009G050300--Sobic003G346600 Sobic009G215200 Sobic009G215200 Sobic009G050300--Sobic009G215200 Sobic009G050300--Sobic001G403500 Sobic001G018900 Sobic001G018900 Sobic009G050300--Sobic001G018900 Sobic009G050300--Sobic002G379500 Sobic001G226500--Sobic003G249700 Sobic001G226500--Sobic007G019400 Sobic009G076400 Sobic009G076400 Sobic001G226500--Sobic009G076400 Sobic001G226500--Sobic004G008400 Sobic001G226500--Sobic002G286900 Sobic007G053300 Sobic007G053300 Sobic001G226500--Sobic007G053300 Sobic001G226500--Sobic006G213000 Sobic001G130301 Sobic001G130301 Sobic001G226500--Sobic001G130301 Sobic009G054800 Sobic009G054800 Sobic001G226500--Sobic009G054800 Sobic001G403500--Sobic009G050300 Sobic004G198400 Sobic004G198400 Sobic001G403500--Sobic004G198400 Sobic001G403500--Sobic009G215200 Sobic001G403500--Sobic002G379500 Sobic001G403500--Sobic007G197800 Sobic001G403500--Sobic002G081600 Sobic001G403500--Sobic006G137100 Sobic001G403500--Sobic006G116700 Sobic001G403500--Sobic010G206200 Sobic003G249700--Sobic007G019400 Sobic003G249700--Sobic001G226500 Sobic001G039400 Sobic001G039400 Sobic003G249700--Sobic001G039400 Sobic003G249700--Sobic003G387900 Sobic003G249700--Sobic002G047600 Sobic003G249700--Sobic007G178600 Sobic003G249700--Sobic004G008400 Sobic001G085400 Sobic001G085400 Sobic003G249700--Sobic001G085400 Sobic003G109600 Sobic003G109600 Sobic003G249700--Sobic003G109600 Sobic009G166500 Sobic009G166500 Sobic005G110800--Sobic009G166500 Sobic005G110800--Sobic002G286900 Sobic001G493001 Sobic001G493001 Sobic005G110800--Sobic001G493001 Sobic005G110800--Sobic002G081600 Sobic005G110800--Sobic009G050300 Sobic005G110800--Sobic004G008400 Sobic009G163800 Sobic009G163800 Sobic005G110800--Sobic009G163800 Sobic005G110800--Sobic003G346600 Sobic005G110800--Sobic001G130301 Sobic007G178600--Sobic004G008400 Sobic007G019000 Sobic007G019000 Sobic007G178600--Sobic007G019000 Sobic007G178600--Sobic003G346600 Sobic007G178600--Sobic009G050300 Sobic007G178600--Sobic008G108601 Sobic006G221200 Sobic006G221200 Sobic007G178600--Sobic006G221200 Sobic007G178600--Sobic009G163800 Sobic007G178600--Sobic003G249700 Sobic007G178600--Sobic002G047600
Octagon: transcription factors


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