Gene annotation
Transcriptome id Sobic.007G051000.1
Synonym
Functional annotation mitochondrial NADH-ubiquinone oxidoreductase, putative, expressed
UniProt A0A1B6PFP2
Pfam PF10276
Panther DB PTHR13156
NCBI CDD -
KEGG Orthology K03939; NADH dehydrogenase (ubiquinone) Fe-S protein 6
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G03070 : NADH-ubiquinone oxidoreductase-related
RAP-DB (Rice) LOC_Os08g06430.1 : mitochondrial NADH-ubiquinone oxidoreductase, putative, expressed
MaizeGDB (Corn) Zm00025a055107 , Zm00025a030052
Brachypodium KQJ95290
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.007G051000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G012500 ATOZI1, putative, expressed -
2 Sobic.009G176000 expressed protein K03945: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 1
3 Sobic.002G398901 - -
4 Sobic.004G211833 - K02267: cytochrome c oxidase subunit 6b
5 Sobic.002G190900 expressed protein -
6 Sobic.006G083500 SLL1 protein, putative, expressed -
7 Sobic.001G018500 expressed protein K17784: MINOS1, mitochondrial inner membrane organizing system protein 1
8 Sobic.003G209000 mitochondrial ATP synthase g subunit family protein, putative, expressed K02140: ATPeFG, ATP5L, F-type H+-transporting ATPase subunit g
9 Sobic.010G204500 peptidase, T1 family, putative, expressed K02735: 20S proteasome subunit beta 3
10 Sobic.004G280700 mitochondrial import inner membrane translocase subunit Tim, putative, expressed K17781: mitochondrial import inner membrane translocase subunit TIM13
11 Sobic.004G310300 phosphate carrier protein, mitochondrial precursor, putative, expressed K15102: SLC25A3, PHC, solute carrier family 25 (mitochondrial phosphate transporter), member 3
12 Sobic.005G188100 peptidase, T1 family, putative, expressed K02729: 20S proteasome subunit alpha 5
13 Sobic.001G048832 - -
14 Sobic.009G119900 acyl carrier protein, putative, expressed K03955: NADH dehydrogenase (ubiquinone) 1 alpha/beta subcomplex 1, acyl-carrier protein
15 Sobic.010G154700 - -
16 Sobic.009G215200 60S ribosomal protein L28-1, putative, expressed K02903: RP-L28e, large subunit ribosomal protein L28e
17 Sobic.006G213000 ribosomal protein S17, putative, expressed K02949: RP-S11e, small subunit ribosomal protein S11e
18 Sobic.002G418400 ubiquinol-cytochrome c reductase complex 6.7 kDa protein, putative, expressed -
19 Sobic.002G081600 ribosomal protein L7Ae, putative, expressed K02951: RP-S12e, small subunit ribosomal protein S12e
20 Sobic.001G403500 40S ribosomal protein S7, putative, expressed K02993: RP-S7e, small subunit ribosomal protein S7e


Gene co-expression network
sample Sobic007G051000 Sobic007G051000 Sobic010G012500 Sobic010G012500 Sobic007G051000--Sobic010G012500 Sobic009G176000 Sobic009G176000 Sobic007G051000--Sobic009G176000 Sobic002G398901 Sobic002G398901 Sobic007G051000--Sobic002G398901 Sobic004G211833 Sobic004G211833 Sobic007G051000--Sobic004G211833 Sobic002G190900 Sobic002G190900 Sobic007G051000--Sobic002G190900 Sobic006G083500 Sobic006G083500 Sobic007G051000--Sobic006G083500 Sobic001G018500 Sobic001G018500 Sobic007G051000--Sobic001G018500 Sobic003G209000 Sobic003G209000 Sobic007G051000--Sobic003G209000 Sobic010G204500 Sobic010G204500 Sobic007G051000--Sobic010G204500 Sobic010G012500--Sobic004G211833 Sobic010G012500--Sobic002G398901 Sobic010G012500--Sobic006G083500 Sobic010G012500--Sobic007G051000 Sobic010G012500--Sobic002G190900 Sobic004G220000 Sobic004G220000 Sobic010G012500--Sobic004G220000 Sobic010G012500--Sobic009G176000 Sobic002G375100 Sobic002G375100 Sobic010G012500--Sobic002G375100 Sobic002G418400 Sobic002G418400 Sobic010G012500--Sobic002G418400 Sobic009G176000--Sobic002G398901 Sobic009G176000--Sobic007G051000 Sobic009G176000--Sobic006G083500 Sobic009G176000--Sobic010G012500 Sobic009G176000--Sobic004G211833 Sobic009G176000--Sobic002G190900 Sobic004G060500 Sobic004G060500 Sobic009G176000--Sobic004G060500 Sobic009G176000--Sobic002G418400 Sobic003G215700 Sobic003G215700 Sobic009G176000--Sobic003G215700 Sobic002G398901--Sobic002G190900 Sobic002G398901--Sobic010G012500 Sobic002G398901--Sobic009G176000 Sobic002G398901--Sobic007G051000 Sobic002G398901--Sobic004G211833 Sobic002G081600 Sobic002G081600 Sobic002G398901--Sobic002G081600 Sobic002G398901--Sobic002G418400 Sobic002G398901--Sobic006G083500 Sobic009G215200 Sobic009G215200 Sobic002G398901--Sobic009G215200 Sobic004G211833--Sobic010G012500 Sobic004G211833--Sobic006G083500 Sobic004G211833--Sobic002G398901 Sobic004G211833--Sobic004G220000 Sobic004G211833--Sobic007G051000 Sobic004G211833--Sobic009G176000 Sobic004G211833--Sobic002G418400 Sobic004G211833--Sobic002G190900 Sobic004G211833--Sobic003G215700 Sobic002G190900--Sobic002G398901 Sobic002G190900--Sobic010G012500 Sobic002G190900--Sobic007G051000 Sobic002G190900--Sobic009G176000 Sobic002G190900--Sobic002G081600 Sobic005G188100 Sobic005G188100 Sobic002G190900--Sobic005G188100 Sobic001G281400 Sobic001G281400 Sobic002G190900--Sobic001G281400 Sobic002G190900--Sobic004G211833 Sobic001G374700 Sobic001G374700 Sobic002G190900--Sobic001G374700 Sobic006G083500--Sobic004G211833 Sobic006G083500--Sobic010G012500 Sobic006G083500--Sobic003G215700 Sobic006G083500--Sobic002G418400 Sobic006G083500--Sobic009G176000 Sobic006G083500--Sobic002G398901 Sobic006G083500--Sobic003G209000 Sobic006G083500--Sobic007G051000 Sobic001G134400 Sobic001G134400 Sobic006G083500--Sobic001G134400 Sobic001G018500--Sobic003G209000 Sobic001G018500--Sobic007G051000 Sobic001G018500--Sobic004G211833 Sobic001G018500--Sobic010G012500 Sobic004G259200 Sobic004G259200 Sobic001G018500--Sobic004G259200 Sobic004G310300 Sobic004G310300 Sobic001G018500--Sobic004G310300 Sobic001G404800 Sobic001G404800 Sobic001G018500--Sobic001G404800 Sobic001G018500--Sobic002G418400 Sobic009G076400 Sobic009G076400 Sobic001G018500--Sobic009G076400 Sobic003G209000--Sobic004G259200 Sobic003G209000--Sobic001G404800 Sobic003G209000--Sobic002G418400 Sobic003G209000--Sobic001G018500 Sobic003G209000--Sobic006G083500 Sobic003G209000--Sobic003G215700 Sobic003G209000--Sobic007G051000 Sobic009G119900 Sobic009G119900 Sobic003G209000--Sobic009G119900 Sobic003G209000--Sobic002G398901 Sobic001G403500 Sobic001G403500 Sobic010G204500--Sobic001G403500 Sobic001G483100 Sobic001G483100 Sobic010G204500--Sobic001G483100 Sobic001G016400 Sobic001G016400 Sobic010G204500--Sobic001G016400 Sobic009G050300 Sobic009G050300 Sobic010G204500--Sobic009G050300 Sobic009G180000 Sobic009G180000 Sobic010G204500--Sobic009G180000 Sobic002G056200 Sobic002G056200 Sobic010G204500--Sobic002G056200 Sobic010G204500--Sobic002G081600 Sobic010G204500--Sobic009G215200 Sobic001G018900 Sobic001G018900 Sobic010G204500--Sobic001G018900
Octagon: transcription factors


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