Gene annotation
Transcriptome id Sobic.009G176000.1
Synonym Sb09g023650
Functional annotation expressed protein
UniProt C5YZU8
Pfam PF15879
Panther DB PTHR17098 PTHR17098:SF2
NCBI CDD -
KEGG Orthology K03945; NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 1
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G08610 : -
RAP-DB (Rice) LOC_Os05g40300.1 : expressed protein
MaizeGDB (Corn) Zm00025a044029
Brachypodium KQK05711
Barley HORVU1Hr1G069360.1 , HORVU1Hr1G069340.1
Wheat TraesCS1A02G302900 , TraesCS1B02G313200 , TraesCS1D02G302300
Populus -


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cDNA sequences
Sobic.009G176000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G398901 - -
2 Sobic.007G051000 mitochondrial NADH-ubiquinone oxidoreductase, putative, expressed K03939: NADH dehydrogenase (ubiquinone) Fe-S protein 6
3 Sobic.006G083500 SLL1 protein, putative, expressed -
4 Sobic.010G012500 ATOZI1, putative, expressed -
5 Sobic.004G211833 - K02267: cytochrome c oxidase subunit 6b
6 Sobic.002G190900 expressed protein -
7 Sobic.004G060500 fiber protein Fb15, putative, expressed -
8 Sobic.002G418400 ubiquinol-cytochrome c reductase complex 6.7 kDa protein, putative, expressed -
9 Sobic.003G215700 ATP synthase epsilon chain, mitochondrial, putative, expressed K02135: ATPeF1E, ATP5E, F-type H+-transporting ATPase subunit epsilon
10 Sobic.008G129400 cytochrome c oxidase polypeptide Vc, putative, expressed -
11 Sobic.001G134400 CHCH domain containing protein, expressed -
12 Sobic.001G048832 - -
13 Sobic.003G209000 mitochondrial ATP synthase g subunit family protein, putative, expressed K02140: ATPeFG, ATP5L, F-type H+-transporting ATPase subunit g
14 Sobic.004G280700 mitochondrial import inner membrane translocase subunit Tim, putative, expressed K17781: mitochondrial import inner membrane translocase subunit TIM13
15 Sobic.010G154700 - -
16 Sobic.001G034700 actin-depolymerizing factor, putative, expressed K05765: cofilin
17 Sobic.009G215200 60S ribosomal protein L28-1, putative, expressed K02903: RP-L28e, large subunit ribosomal protein L28e
18 Sobic.005G188100 peptidase, T1 family, putative, expressed K02729: 20S proteasome subunit alpha 5
19 Sobic.009G119900 acyl carrier protein, putative, expressed K03955: NADH dehydrogenase (ubiquinone) 1 alpha/beta subcomplex 1, acyl-carrier protein
20 Sobic.004G220000 kinase, pfkB family, putative, expressed K00856: E2.7.1.20, adenosine kinase


Gene co-expression network
sample Sobic009G176000 Sobic009G176000 Sobic002G398901 Sobic002G398901 Sobic009G176000--Sobic002G398901 Sobic007G051000 Sobic007G051000 Sobic009G176000--Sobic007G051000 Sobic006G083500 Sobic006G083500 Sobic009G176000--Sobic006G083500 Sobic010G012500 Sobic010G012500 Sobic009G176000--Sobic010G012500 Sobic004G211833 Sobic004G211833 Sobic009G176000--Sobic004G211833 Sobic002G190900 Sobic002G190900 Sobic009G176000--Sobic002G190900 Sobic004G060500 Sobic004G060500 Sobic009G176000--Sobic004G060500 Sobic002G418400 Sobic002G418400 Sobic009G176000--Sobic002G418400 Sobic003G215700 Sobic003G215700 Sobic009G176000--Sobic003G215700 Sobic002G398901--Sobic002G190900 Sobic002G398901--Sobic010G012500 Sobic002G398901--Sobic009G176000 Sobic002G398901--Sobic007G051000 Sobic002G398901--Sobic004G211833 Sobic002G081600 Sobic002G081600 Sobic002G398901--Sobic002G081600 Sobic002G398901--Sobic002G418400 Sobic002G398901--Sobic006G083500 Sobic009G215200 Sobic009G215200 Sobic002G398901--Sobic009G215200 Sobic007G051000--Sobic010G012500 Sobic007G051000--Sobic009G176000 Sobic007G051000--Sobic002G398901 Sobic007G051000--Sobic004G211833 Sobic007G051000--Sobic002G190900 Sobic007G051000--Sobic006G083500 Sobic001G018500 Sobic001G018500 Sobic007G051000--Sobic001G018500 Sobic003G209000 Sobic003G209000 Sobic007G051000--Sobic003G209000 Sobic010G204500 Sobic010G204500 Sobic007G051000--Sobic010G204500 Sobic006G083500--Sobic004G211833 Sobic006G083500--Sobic010G012500 Sobic006G083500--Sobic003G215700 Sobic006G083500--Sobic002G418400 Sobic006G083500--Sobic009G176000 Sobic006G083500--Sobic002G398901 Sobic006G083500--Sobic003G209000 Sobic006G083500--Sobic007G051000 Sobic001G134400 Sobic001G134400 Sobic006G083500--Sobic001G134400 Sobic010G012500--Sobic004G211833 Sobic010G012500--Sobic002G398901 Sobic010G012500--Sobic006G083500 Sobic010G012500--Sobic007G051000 Sobic010G012500--Sobic002G190900 Sobic004G220000 Sobic004G220000 Sobic010G012500--Sobic004G220000 Sobic010G012500--Sobic009G176000 Sobic002G375100 Sobic002G375100 Sobic010G012500--Sobic002G375100 Sobic010G012500--Sobic002G418400 Sobic004G211833--Sobic010G012500 Sobic004G211833--Sobic006G083500 Sobic004G211833--Sobic002G398901 Sobic004G211833--Sobic004G220000 Sobic004G211833--Sobic007G051000 Sobic004G211833--Sobic009G176000 Sobic004G211833--Sobic002G418400 Sobic004G211833--Sobic002G190900 Sobic004G211833--Sobic003G215700 Sobic002G190900--Sobic002G398901 Sobic002G190900--Sobic010G012500 Sobic002G190900--Sobic007G051000 Sobic002G190900--Sobic009G176000 Sobic002G190900--Sobic002G081600 Sobic005G188100 Sobic005G188100 Sobic002G190900--Sobic005G188100 Sobic001G281400 Sobic001G281400 Sobic002G190900--Sobic001G281400 Sobic002G190900--Sobic004G211833 Sobic001G374700 Sobic001G374700 Sobic002G190900--Sobic001G374700 Sobic004G060500--Sobic003G215700 Sobic004G060500--Sobic009G176000 Sobic001G519000 Sobic001G519000 Sobic004G060500--Sobic001G519000 Sobic001G047800 Sobic001G047800 Sobic004G060500--Sobic001G047800 Sobic004G060500--Sobic006G083500 Sobic004G060500--Sobic002G418400 Sobic002G309700 Sobic002G309700 Sobic004G060500--Sobic002G309700 Sobic002G296200 Sobic002G296200 Sobic004G060500--Sobic002G296200 Sobic010G059300 Sobic010G059300 Sobic004G060500--Sobic010G059300 Sobic002G418400--Sobic006G083500 Sobic002G418400--Sobic003G215700 Sobic002G418400--Sobic003G209000 Sobic002G418400--Sobic002G398901 Sobic002G418400--Sobic004G211833 Sobic002G418400--Sobic010G012500 Sobic002G418400--Sobic001G047800 Sobic004G259200 Sobic004G259200 Sobic002G418400--Sobic004G259200 Sobic001G404800 Sobic001G404800 Sobic002G418400--Sobic001G404800 Sobic003G215700--Sobic006G083500 Sobic003G215700--Sobic002G418400 Sobic003G215700--Sobic001G047800 Sobic003G215700--Sobic003G209000 Sobic003G215700--Sobic004G211833 Sobic003G215700--Sobic001G404800 Sobic003G215700--Sobic004G060500 Sobic003G215700--Sobic001G134400 Sobic003G215700--Sobic010G012500
Octagon: transcription factors


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