Gene annotation
Transcriptome id Sobic.001G034700.1
Synonym ADF4, Sb01g003250, ATADF4
Functional annotation actin-depolymerizing factor, putative, expressed
UniProt A0A1B6QH55
Pfam PF00241
Panther DB PTHR11913 PTHR11913:SF29
NCBI CDD KOG1735; Actin depolymerizing factor
KEGG Orthology K05765; cofilin
Gene Ontology GO:0005622; intracellular GO:0003779actin binding GO:0015629actin cytoskeleton


Orthologs (automatic annotation)
TAIR AT5G59890 : actin depolymerizing factor 4
RAP-DB (Rice) LOC_Os04g46910.1 : actin-depolymerizing factor, putative, expressed
MaizeGDB (Corn) Zm00025a008806 , Zm00025a016433
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.001G034700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G041600 profilin domain containing protein, expressed K05759: profilin
2 Sobic.001G086300 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed -
3 Sobic.001G048832 - -
4 Sobic.009G176000 expressed protein K03945: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 1
5 Sobic.007G051000 mitochondrial NADH-ubiquinone oxidoreductase, putative, expressed K03939: NADH dehydrogenase (ubiquinone) Fe-S protein 6
6 Sobic.005G188100 peptidase, T1 family, putative, expressed K02729: 20S proteasome subunit alpha 5
7 Sobic.003G285800 ubiquitin domain-containing protein 1, putative, expressed -
8 Sobic.010G178200 hemoglobin-like protein HbO, putative, expressed -
9 Sobic.003G150000 split hand/foot malformation type 1, putative, expressed K10881: SHFM1, DSS1, 26 proteasome complex subunit DSS1
10 Sobic.002G190900 expressed protein -
11 Sobic.010G018400 expressed protein K02153: ATPeV0E, V-type H+-transporting ATPase subunit e
12 Sobic.008G185400 ras-related protein, putative, expressed K07889: Ras-related protein Rab-5C
13 Sobic.010G204500 peptidase, T1 family, putative, expressed K02735: 20S proteasome subunit beta 3
14 Sobic.002G345300 ZOS7-05 - C2H2 zinc finger protein, expressed -
15 Sobic.004G272800 VHS and GAT domain containing protein, expressed -
16 Sobic.006G047400 60S ribosomal protein L37a, putative, expressed K02921: RP-L37Ae, large subunit ribosomal protein L37Ae
17 Sobic.009G163800 60S ribosomal protein L36-2, putative, expressed K02920: RP-L36e, large subunit ribosomal protein L36e
18 Sobic.004G196300 ras-related protein, putative, expressed K07877: Ras-related protein Rab-2A
19 Sobic.001G432000 LYR motif containing protein, putative, expressed -
20 Sobic.003G254300 peroxiredoxin, putative, expressed -


Gene co-expression network
sample Sobic001G034700 Sobic001G034700 Sobic010G041600 Sobic010G041600 Sobic001G034700--Sobic010G041600 Sobic001G086300 Sobic001G086300 Sobic001G034700--Sobic001G086300 Sobic001G048832 Sobic001G048832 Sobic001G034700--Sobic001G048832 Sobic009G176000 Sobic009G176000 Sobic001G034700--Sobic009G176000 Sobic007G051000 Sobic007G051000 Sobic001G034700--Sobic007G051000 Sobic005G188100 Sobic005G188100 Sobic001G034700--Sobic005G188100 Sobic003G285800 Sobic003G285800 Sobic001G034700--Sobic003G285800 Sobic010G178200 Sobic010G178200 Sobic001G034700--Sobic010G178200 Sobic003G150000 Sobic003G150000 Sobic001G034700--Sobic003G150000 Sobic010G041600--Sobic001G034700 Sobic001G281400 Sobic001G281400 Sobic010G041600--Sobic001G281400 Sobic004G272800 Sobic004G272800 Sobic010G041600--Sobic004G272800 Sobic002G190900 Sobic002G190900 Sobic010G041600--Sobic002G190900 Sobic008G185400 Sobic008G185400 Sobic010G041600--Sobic008G185400 Sobic010G041600--Sobic001G086300 Sobic010G041600--Sobic010G178200 Sobic008G129400 Sobic008G129400 Sobic010G041600--Sobic008G129400 Sobic010G041600--Sobic007G051000 Sobic006G047400 Sobic006G047400 Sobic001G086300--Sobic006G047400 Sobic005G110800 Sobic005G110800 Sobic001G086300--Sobic005G110800 Sobic009G166500 Sobic009G166500 Sobic001G086300--Sobic009G166500 Sobic004G280700 Sobic004G280700 Sobic001G086300--Sobic004G280700 Sobic001G086300--Sobic001G034700 Sobic009G163800 Sobic009G163800 Sobic001G086300--Sobic009G163800 Sobic006G106100 Sobic006G106100 Sobic001G086300--Sobic006G106100 Sobic004G331400 Sobic004G331400 Sobic001G086300--Sobic004G331400 Sobic002G175100 Sobic002G175100 Sobic001G086300--Sobic002G175100 Sobic010G154700 Sobic010G154700 Sobic001G048832--Sobic010G154700 Sobic001G132100 Sobic001G132100 Sobic001G048832--Sobic001G132100 Sobic001G048832--Sobic007G051000 Sobic001G048832--Sobic009G176000 Sobic001G048832--Sobic005G188100 Sobic001G048832--Sobic002G190900 Sobic009G119900 Sobic009G119900 Sobic001G048832--Sobic009G119900 Sobic001G048832--Sobic004G272800 Sobic002G398901 Sobic002G398901 Sobic001G048832--Sobic002G398901 Sobic009G176000--Sobic002G398901 Sobic009G176000--Sobic007G051000 Sobic006G083500 Sobic006G083500 Sobic009G176000--Sobic006G083500 Sobic010G012500 Sobic010G012500 Sobic009G176000--Sobic010G012500 Sobic004G211833 Sobic004G211833 Sobic009G176000--Sobic004G211833 Sobic009G176000--Sobic002G190900 Sobic004G060500 Sobic004G060500 Sobic009G176000--Sobic004G060500 Sobic002G418400 Sobic002G418400 Sobic009G176000--Sobic002G418400 Sobic003G215700 Sobic003G215700 Sobic009G176000--Sobic003G215700 Sobic007G051000--Sobic010G012500 Sobic007G051000--Sobic009G176000 Sobic007G051000--Sobic002G398901 Sobic007G051000--Sobic004G211833 Sobic007G051000--Sobic002G190900 Sobic007G051000--Sobic006G083500 Sobic001G018500 Sobic001G018500 Sobic007G051000--Sobic001G018500 Sobic003G209000 Sobic003G209000 Sobic007G051000--Sobic003G209000 Sobic010G204500 Sobic010G204500 Sobic007G051000--Sobic010G204500 Sobic005G188100--Sobic002G190900 Sobic005G188100--Sobic009G163800 Sobic005G188100--Sobic002G398901 Sobic005G188100--Sobic010G204500 Sobic005G188100--Sobic009G166500 Sobic005G188100--Sobic007G051000 Sobic005G188100--Sobic006G047400 Sobic005G188100--Sobic010G012500 Sobic005G188100--Sobic004G211833 Sobic002G046100 Sobic002G046100 Sobic003G285800--Sobic002G046100 Sobic002G187500 Sobic002G187500 Sobic003G285800--Sobic002G187500 Sobic003G285800--Sobic010G178200 Sobic003G350300 Sobic003G350300 Sobic003G285800--Sobic003G350300 Sobic002G345300 Sobic002G345300 Sobic003G285800--Sobic002G345300 Sobic001G477300 Sobic001G477300 Sobic003G285800--Sobic001G477300 Sobic003G285800--Sobic001G281400 Sobic010G086200 Sobic010G086200 Sobic003G285800--Sobic010G086200 Sobic009G129000 Sobic009G129000 Sobic003G285800--Sobic009G129000 Sobic010G178200--Sobic002G345300 Sobic010G178200--Sobic003G285800 Sobic010G178200--Sobic003G350300 Sobic010G178200--Sobic010G041600 Sobic010G178200--Sobic001G034700 Sobic010G178200--Sobic001G281400 Sobic010G178200--Sobic002G046100 Sobic010G274900 Sobic010G274900 Sobic010G178200--Sobic010G274900 Sobic007G087200 Sobic007G087200 Sobic010G178200--Sobic007G087200 Sobic003G150000--Sobic005G110800 Sobic003G150000--Sobic010G204500 Sobic003G249700 Sobic003G249700 Sobic003G150000--Sobic003G249700 Sobic001G493001 Sobic001G493001 Sobic003G150000--Sobic001G493001 Sobic001G403500 Sobic001G403500 Sobic003G150000--Sobic001G403500 Sobic001G054900 Sobic001G054900 Sobic003G150000--Sobic001G054900 Sobic009G050300 Sobic009G050300 Sobic003G150000--Sobic009G050300 Sobic005G019700 Sobic005G019700 Sobic003G150000--Sobic005G019700 Sobic003G150000--Sobic009G163800
Octagon: transcription factors


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