Gene annotation
Transcriptome id Sobic.010G041600.1
Synonym Sb10g003670, PFN3, PRF3
Functional annotation profilin domain containing protein, expressed
UniProt C5Z4B6
Pfam PF00235
Panther DB PTHR11604 PTHR11604:SF7
NCBI CDD KOG1755; Profilin
KEGG Orthology K05759; profilin
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G56600 : profilin 3
RAP-DB (Rice) LOC_Os06g05880.1 : profilin domain containing protein, expressed
MaizeGDB (Corn) Zm00025a050008 , Zm00025a037209 , Zm00025a041555
Brachypodium KQK03115 , KQK03116 , KQK03114 , KQK19606 , KQK03113
Barley HORVU5Hr1G053460.1 , HORVU7Hr1G022570.1 , HORVU7Hr1G022570.2
Wheat TraesCS7D02G101800 , TraesCS7A02G107400
Populus -


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cDNA sequences
Sobic.010G041600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G034700 actin-depolymerizing factor, putative, expressed K05765: cofilin
2 Sobic.001G281400 expressed protein -
3 Sobic.004G272800 VHS and GAT domain containing protein, expressed -
4 Sobic.002G190900 expressed protein -
5 Sobic.008G185400 ras-related protein, putative, expressed K07889: Ras-related protein Rab-5C
6 Sobic.001G086300 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed -
7 Sobic.010G178200 hemoglobin-like protein HbO, putative, expressed -
8 Sobic.008G129400 cytochrome c oxidase polypeptide Vc, putative, expressed -
9 Sobic.007G051000 mitochondrial NADH-ubiquinone oxidoreductase, putative, expressed K03939: NADH dehydrogenase (ubiquinone) Fe-S protein 6
10 Sobic.004G306200 peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed K01802: peptidylprolyl isomerase
11 Sobic.006G047400 60S ribosomal protein L37a, putative, expressed K02921: RP-L37Ae, large subunit ribosomal protein L37Ae
12 Sobic.004G187900 riboflavin biosynthesis protein ribAB, chloroplast precursor, putative, expressed K14652: 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II
13 Sobic.003G285800 ubiquitin domain-containing protein 1, putative, expressed -
14 Sobic.002G187500 hypoxia-responsive family protein, putative, expressed -
15 Sobic.009G023200 glycine-rich protein A3, putative, expressed -
16 Sobic.009G176000 expressed protein K03945: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 1
17 Sobic.009G033700 protein kinase, putative, expressed K13436: pto-interacting protein 1
18 Sobic.002G398901 - -
19 Sobic.001G390300 OsCam1-1 - Calmodulin, expressed K02183: calmodulin
20 Sobic.009G105600 60S ribosomal protein L29-2, putative, expressed K02905: RP-L29e, large subunit ribosomal protein L29e


Gene co-expression network
sample Sobic010G041600 Sobic010G041600 Sobic001G034700 Sobic001G034700 Sobic010G041600--Sobic001G034700 Sobic001G281400 Sobic001G281400 Sobic010G041600--Sobic001G281400 Sobic004G272800 Sobic004G272800 Sobic010G041600--Sobic004G272800 Sobic002G190900 Sobic002G190900 Sobic010G041600--Sobic002G190900 Sobic008G185400 Sobic008G185400 Sobic010G041600--Sobic008G185400 Sobic001G086300 Sobic001G086300 Sobic010G041600--Sobic001G086300 Sobic010G178200 Sobic010G178200 Sobic010G041600--Sobic010G178200 Sobic008G129400 Sobic008G129400 Sobic010G041600--Sobic008G129400 Sobic007G051000 Sobic007G051000 Sobic010G041600--Sobic007G051000 Sobic001G034700--Sobic010G041600 Sobic001G034700--Sobic001G086300 Sobic001G048832 Sobic001G048832 Sobic001G034700--Sobic001G048832 Sobic009G176000 Sobic009G176000 Sobic001G034700--Sobic009G176000 Sobic001G034700--Sobic007G051000 Sobic005G188100 Sobic005G188100 Sobic001G034700--Sobic005G188100 Sobic003G285800 Sobic003G285800 Sobic001G034700--Sobic003G285800 Sobic001G034700--Sobic010G178200 Sobic003G150000 Sobic003G150000 Sobic001G034700--Sobic003G150000 Sobic004G187900 Sobic004G187900 Sobic001G281400--Sobic004G187900 Sobic002G267500 Sobic002G267500 Sobic001G281400--Sobic002G267500 Sobic010G149300 Sobic010G149300 Sobic001G281400--Sobic010G149300 Sobic001G281400--Sobic002G190900 Sobic002G046100 Sobic002G046100 Sobic001G281400--Sobic002G046100 Sobic010G086200 Sobic010G086200 Sobic001G281400--Sobic010G086200 Sobic009G141800 Sobic009G141800 Sobic001G281400--Sobic009G141800 Sobic009G008900 Sobic009G008900 Sobic001G281400--Sobic009G008900 Sobic001G499300 Sobic001G499300 Sobic001G281400--Sobic001G499300 Sobic004G272800--Sobic002G267500 Sobic004G272800--Sobic001G281400 Sobic003G253000 Sobic003G253000 Sobic004G272800--Sobic003G253000 Sobic004G272800--Sobic001G048832 Sobic004G272800--Sobic002G190900 Sobic002G345300 Sobic002G345300 Sobic004G272800--Sobic002G345300 Sobic004G272800--Sobic002G046100 Sobic004G272800--Sobic010G041600 Sobic004G272800--Sobic005G188100 Sobic002G398901 Sobic002G398901 Sobic002G190900--Sobic002G398901 Sobic010G012500 Sobic010G012500 Sobic002G190900--Sobic010G012500 Sobic002G190900--Sobic007G051000 Sobic002G190900--Sobic009G176000 Sobic002G081600 Sobic002G081600 Sobic002G190900--Sobic002G081600 Sobic002G190900--Sobic005G188100 Sobic002G190900--Sobic001G281400 Sobic004G211833 Sobic004G211833 Sobic002G190900--Sobic004G211833 Sobic001G374700 Sobic001G374700 Sobic002G190900--Sobic001G374700 Sobic008G185400--Sobic002G046100 Sobic008G185400--Sobic010G041600 Sobic008G185400--Sobic003G285800 Sobic006G143400 Sobic006G143400 Sobic008G185400--Sobic006G143400 Sobic008G185400--Sobic001G034700 Sobic008G185400--Sobic004G272800 Sobic002G187500 Sobic002G187500 Sobic008G185400--Sobic002G187500 Sobic008G185400--Sobic002G190900 Sobic008G185400--Sobic001G281400 Sobic006G047400 Sobic006G047400 Sobic001G086300--Sobic006G047400 Sobic005G110800 Sobic005G110800 Sobic001G086300--Sobic005G110800 Sobic009G166500 Sobic009G166500 Sobic001G086300--Sobic009G166500 Sobic004G280700 Sobic004G280700 Sobic001G086300--Sobic004G280700 Sobic001G086300--Sobic001G034700 Sobic009G163800 Sobic009G163800 Sobic001G086300--Sobic009G163800 Sobic006G106100 Sobic006G106100 Sobic001G086300--Sobic006G106100 Sobic004G331400 Sobic004G331400 Sobic001G086300--Sobic004G331400 Sobic002G175100 Sobic002G175100 Sobic001G086300--Sobic002G175100 Sobic010G178200--Sobic002G345300 Sobic010G178200--Sobic003G285800 Sobic003G350300 Sobic003G350300 Sobic010G178200--Sobic003G350300 Sobic010G178200--Sobic010G041600 Sobic010G178200--Sobic001G034700 Sobic010G178200--Sobic001G281400 Sobic010G178200--Sobic002G046100 Sobic010G274900 Sobic010G274900 Sobic010G178200--Sobic010G274900 Sobic007G087200 Sobic007G087200 Sobic010G178200--Sobic007G087200 Sobic010G018400 Sobic010G018400 Sobic008G129400--Sobic010G018400 Sobic008G129400--Sobic009G176000 Sobic008G129400--Sobic002G190900 Sobic008G129400--Sobic002G398901 Sobic008G129400--Sobic007G051000 Sobic006G083500 Sobic006G083500 Sobic008G129400--Sobic006G083500 Sobic008G129400--Sobic010G012500 Sobic001G445800 Sobic001G445800 Sobic008G129400--Sobic001G445800 Sobic003G209000 Sobic003G209000 Sobic008G129400--Sobic003G209000 Sobic007G051000--Sobic010G012500 Sobic007G051000--Sobic009G176000 Sobic007G051000--Sobic002G398901 Sobic007G051000--Sobic004G211833 Sobic007G051000--Sobic002G190900 Sobic007G051000--Sobic006G083500 Sobic001G018500 Sobic001G018500 Sobic007G051000--Sobic001G018500 Sobic007G051000--Sobic003G209000 Sobic010G204500 Sobic010G204500 Sobic007G051000--Sobic010G204500
Octagon: transcription factors


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