Gene annotation
Transcriptome id Sobic.004G306200.1
Synonym ATFKBP12, FKBP12, Sb04g033900
Functional annotation peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed
UniProt C5XSS1
Pfam PF00254
Panther DB PTHR10516 PTHR10516:SF214
NCBI CDD KOG0544; FKBP-type peptidyl-prolyl cis-trans isomerase
KEGG Orthology K01802; peptidylprolyl isomerase
Gene Ontology GO:0006457; protein folding


Orthologs (automatic annotation)
TAIR AT5G64350 : FK506-binding protein 12
RAP-DB (Rice) LOC_Os02g52290.1 : peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed
MaizeGDB (Corn) Zm00025a022191
Brachypodium PNT69591 , PNT69590
Barley HORVU6Hr1G077340.1 , HORVU6Hr1G077340.3 , HORVU6Hr1G077340.2 , HORVU6Hr1G077340.4
Wheat TraesCS6B02G344100 , TraesCS6B02G344100 , TraesCS6A02G314100 , TraesCS6A02G314100 , TraesCS6D02G293400
Populus -


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cDNA sequences
Sobic.004G306200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G211833 - K02267: cytochrome c oxidase subunit 6b
2 Sobic.002G398901 - -
3 Sobic.004G220000 kinase, pfkB family, putative, expressed K00856: E2.7.1.20, adenosine kinase
4 Sobic.010G012500 ATOZI1, putative, expressed -
5 Sobic.010G041600 profilin domain containing protein, expressed K05759: profilin
6 Sobic.007G051000 mitochondrial NADH-ubiquinone oxidoreductase, putative, expressed K03939: NADH dehydrogenase (ubiquinone) Fe-S protein 6
7 Sobic.009G176000 expressed protein K03945: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 1
8 Sobic.005G188100 peptidase, T1 family, putative, expressed K02729: 20S proteasome subunit alpha 5
9 Sobic.002G190900 expressed protein -
10 Sobic.008G129400 cytochrome c oxidase polypeptide Vc, putative, expressed -
11 Sobic.006G083500 SLL1 protein, putative, expressed -
12 Sobic.004G280700 mitochondrial import inner membrane translocase subunit Tim, putative, expressed K17781: mitochondrial import inner membrane translocase subunit TIM13
13 Sobic.001G034700 actin-depolymerizing factor, putative, expressed K05765: cofilin
14 Sobic.001G018500 expressed protein K17784: MINOS1, mitochondrial inner membrane organizing system protein 1
15 Sobic.006G047400 60S ribosomal protein L37a, putative, expressed K02921: RP-L37Ae, large subunit ribosomal protein L37Ae
16 Sobic.005G113300 -(PubMedID : 26976818)@serine hydroxymethyltransferase, mitochondrial precursor, putative, expressed K00600: glyA, glycine hydroxymethyltransferase
17 Sobic.009G076400 ribosomal protein L22, putative, expressed K02880: RP-L17e, large subunit ribosomal protein L17e
18 Sobic.001G304400 expressed protein -
19 Sobic.006G106100 ribosomal protein, putative, expressed K02955: RP-S14e, small subunit ribosomal protein S14e
20 Sobic.003G150000 split hand/foot malformation type 1, putative, expressed K10881: SHFM1, DSS1, 26 proteasome complex subunit DSS1


Gene co-expression network
sample Sobic004G306200 Sobic004G306200 Sobic004G211833 Sobic004G211833 Sobic004G306200--Sobic004G211833 Sobic002G398901 Sobic002G398901 Sobic004G306200--Sobic002G398901 Sobic004G220000 Sobic004G220000 Sobic004G306200--Sobic004G220000 Sobic010G012500 Sobic010G012500 Sobic004G306200--Sobic010G012500 Sobic010G041600 Sobic010G041600 Sobic004G306200--Sobic010G041600 Sobic007G051000 Sobic007G051000 Sobic004G306200--Sobic007G051000 Sobic009G176000 Sobic009G176000 Sobic004G306200--Sobic009G176000 Sobic005G188100 Sobic005G188100 Sobic004G306200--Sobic005G188100 Sobic002G190900 Sobic002G190900 Sobic004G306200--Sobic002G190900 Sobic004G211833--Sobic010G012500 Sobic006G083500 Sobic006G083500 Sobic004G211833--Sobic006G083500 Sobic004G211833--Sobic002G398901 Sobic004G211833--Sobic004G220000 Sobic004G211833--Sobic007G051000 Sobic004G211833--Sobic009G176000 Sobic002G418400 Sobic002G418400 Sobic004G211833--Sobic002G418400 Sobic004G211833--Sobic002G190900 Sobic003G215700 Sobic003G215700 Sobic004G211833--Sobic003G215700 Sobic002G398901--Sobic002G190900 Sobic002G398901--Sobic010G012500 Sobic002G398901--Sobic009G176000 Sobic002G398901--Sobic007G051000 Sobic002G398901--Sobic004G211833 Sobic002G081600 Sobic002G081600 Sobic002G398901--Sobic002G081600 Sobic002G398901--Sobic002G418400 Sobic002G398901--Sobic006G083500 Sobic009G215200 Sobic009G215200 Sobic002G398901--Sobic009G215200 Sobic005G113300 Sobic005G113300 Sobic004G220000--Sobic005G113300 Sobic004G220000--Sobic004G211833 Sobic004G220000--Sobic010G012500 Sobic004G220000--Sobic002G398901 Sobic001G295200 Sobic001G295200 Sobic004G220000--Sobic001G295200 Sobic004G220000--Sobic006G083500 Sobic009G188000 Sobic009G188000 Sobic004G220000--Sobic009G188000 Sobic001G361600 Sobic001G361600 Sobic004G220000--Sobic001G361600 Sobic001G130301 Sobic001G130301 Sobic004G220000--Sobic001G130301 Sobic010G012500--Sobic004G211833 Sobic010G012500--Sobic002G398901 Sobic010G012500--Sobic006G083500 Sobic010G012500--Sobic007G051000 Sobic010G012500--Sobic002G190900 Sobic010G012500--Sobic004G220000 Sobic010G012500--Sobic009G176000 Sobic002G375100 Sobic002G375100 Sobic010G012500--Sobic002G375100 Sobic010G012500--Sobic002G418400 Sobic001G034700 Sobic001G034700 Sobic010G041600--Sobic001G034700 Sobic001G281400 Sobic001G281400 Sobic010G041600--Sobic001G281400 Sobic004G272800 Sobic004G272800 Sobic010G041600--Sobic004G272800 Sobic010G041600--Sobic002G190900 Sobic008G185400 Sobic008G185400 Sobic010G041600--Sobic008G185400 Sobic001G086300 Sobic001G086300 Sobic010G041600--Sobic001G086300 Sobic010G178200 Sobic010G178200 Sobic010G041600--Sobic010G178200 Sobic008G129400 Sobic008G129400 Sobic010G041600--Sobic008G129400 Sobic010G041600--Sobic007G051000 Sobic007G051000--Sobic010G012500 Sobic007G051000--Sobic009G176000 Sobic007G051000--Sobic002G398901 Sobic007G051000--Sobic004G211833 Sobic007G051000--Sobic002G190900 Sobic007G051000--Sobic006G083500 Sobic001G018500 Sobic001G018500 Sobic007G051000--Sobic001G018500 Sobic003G209000 Sobic003G209000 Sobic007G051000--Sobic003G209000 Sobic010G204500 Sobic010G204500 Sobic007G051000--Sobic010G204500 Sobic009G176000--Sobic002G398901 Sobic009G176000--Sobic007G051000 Sobic009G176000--Sobic006G083500 Sobic009G176000--Sobic010G012500 Sobic009G176000--Sobic004G211833 Sobic009G176000--Sobic002G190900 Sobic004G060500 Sobic004G060500 Sobic009G176000--Sobic004G060500 Sobic009G176000--Sobic002G418400 Sobic009G176000--Sobic003G215700 Sobic005G188100--Sobic002G190900 Sobic009G163800 Sobic009G163800 Sobic005G188100--Sobic009G163800 Sobic005G188100--Sobic002G398901 Sobic005G188100--Sobic010G204500 Sobic009G166500 Sobic009G166500 Sobic005G188100--Sobic009G166500 Sobic005G188100--Sobic007G051000 Sobic006G047400 Sobic006G047400 Sobic005G188100--Sobic006G047400 Sobic005G188100--Sobic010G012500 Sobic005G188100--Sobic004G211833 Sobic002G190900--Sobic002G398901 Sobic002G190900--Sobic010G012500 Sobic002G190900--Sobic007G051000 Sobic002G190900--Sobic009G176000 Sobic002G190900--Sobic002G081600 Sobic002G190900--Sobic005G188100 Sobic002G190900--Sobic001G281400 Sobic002G190900--Sobic004G211833 Sobic001G374700 Sobic001G374700 Sobic002G190900--Sobic001G374700
Octagon: transcription factors


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