Gene annotation
Transcriptome id Sobic.002G190900.1
Synonym Sb02g023820
Functional annotation expressed protein
UniProt C5XC06
Pfam -
Panther DB PTHR36041
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G47833 : -
RAP-DB (Rice) LOC_Os09g21470.1 : expressed protein
MaizeGDB (Corn) Zm00025a046843 , Zm00025a013847
Brachypodium KQJ90112 , KQJ83756
Barley HORVU5Hr1G059820.10 , HORVU5Hr1G059820.7 , HORVU5Hr1G059820.6 , HORVU5Hr1G059820.9 , HORVU5Hr1G059820.8
Wheat TraesCS5D02G206400 , TraesCS5A02G200700 , TraesCS5B02G199300
Populus -


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cDNA sequences
Sobic.002G190900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G398901 - -
2 Sobic.010G012500 ATOZI1, putative, expressed -
3 Sobic.007G051000 mitochondrial NADH-ubiquinone oxidoreductase, putative, expressed K03939: NADH dehydrogenase (ubiquinone) Fe-S protein 6
4 Sobic.009G176000 expressed protein K03945: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 1
5 Sobic.002G081600 ribosomal protein L7Ae, putative, expressed K02951: RP-S12e, small subunit ribosomal protein S12e
6 Sobic.005G188100 peptidase, T1 family, putative, expressed K02729: 20S proteasome subunit alpha 5
7 Sobic.001G281400 expressed protein -
8 Sobic.004G211833 - K02267: cytochrome c oxidase subunit 6b
9 Sobic.001G374700 40S ribosomal protein S21, putative, expressed K02971: RP-S21e, small subunit ribosomal protein S21e
10 Sobic.002G187500 hypoxia-responsive family protein, putative, expressed -
11 Sobic.010G009300 6-phosphogluconate dehydrogenase, decarboxylating, putative, expressed K00033: PGD, gnd, 6-phosphogluconate dehydrogenase
12 Sobic.006G083500 SLL1 protein, putative, expressed -
13 Sobic.007G184600 60S ribosomal protein L38, putative, expressed K02923: RP-L38e, large subunit ribosomal protein L38e
14 Sobic.006G047400 60S ribosomal protein L37a, putative, expressed K02921: RP-L37Ae, large subunit ribosomal protein L37Ae
15 Sobic.004G101300 expressed protein -
16 Sobic.009G166500 40S ribosomal protein S23, putative, expressed K02973: RP-S23e, small subunit ribosomal protein S23e
17 Sobic.004G321300 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed K09286: EREBP-like factor
18 Sobic.002G418400 ubiquinol-cytochrome c reductase complex 6.7 kDa protein, putative, expressed -
19 Sobic.001G390300 OsCam1-1 - Calmodulin, expressed K02183: calmodulin
20 Sobic.010G204500 peptidase, T1 family, putative, expressed K02735: 20S proteasome subunit beta 3


Gene co-expression network
sample Sobic002G190900 Sobic002G190900 Sobic002G398901 Sobic002G398901 Sobic002G190900--Sobic002G398901 Sobic010G012500 Sobic010G012500 Sobic002G190900--Sobic010G012500 Sobic007G051000 Sobic007G051000 Sobic002G190900--Sobic007G051000 Sobic009G176000 Sobic009G176000 Sobic002G190900--Sobic009G176000 Sobic002G081600 Sobic002G081600 Sobic002G190900--Sobic002G081600 Sobic005G188100 Sobic005G188100 Sobic002G190900--Sobic005G188100 Sobic001G281400 Sobic001G281400 Sobic002G190900--Sobic001G281400 Sobic004G211833 Sobic004G211833 Sobic002G190900--Sobic004G211833 Sobic001G374700 Sobic001G374700 Sobic002G190900--Sobic001G374700 Sobic002G398901--Sobic002G190900 Sobic002G398901--Sobic010G012500 Sobic002G398901--Sobic009G176000 Sobic002G398901--Sobic007G051000 Sobic002G398901--Sobic004G211833 Sobic002G398901--Sobic002G081600 Sobic002G418400 Sobic002G418400 Sobic002G398901--Sobic002G418400 Sobic006G083500 Sobic006G083500 Sobic002G398901--Sobic006G083500 Sobic009G215200 Sobic009G215200 Sobic002G398901--Sobic009G215200 Sobic010G012500--Sobic004G211833 Sobic010G012500--Sobic002G398901 Sobic010G012500--Sobic006G083500 Sobic010G012500--Sobic007G051000 Sobic010G012500--Sobic002G190900 Sobic004G220000 Sobic004G220000 Sobic010G012500--Sobic004G220000 Sobic010G012500--Sobic009G176000 Sobic002G375100 Sobic002G375100 Sobic010G012500--Sobic002G375100 Sobic010G012500--Sobic002G418400 Sobic007G051000--Sobic010G012500 Sobic007G051000--Sobic009G176000 Sobic007G051000--Sobic002G398901 Sobic007G051000--Sobic004G211833 Sobic007G051000--Sobic002G190900 Sobic007G051000--Sobic006G083500 Sobic001G018500 Sobic001G018500 Sobic007G051000--Sobic001G018500 Sobic003G209000 Sobic003G209000 Sobic007G051000--Sobic003G209000 Sobic010G204500 Sobic010G204500 Sobic007G051000--Sobic010G204500 Sobic009G176000--Sobic002G398901 Sobic009G176000--Sobic007G051000 Sobic009G176000--Sobic006G083500 Sobic009G176000--Sobic010G012500 Sobic009G176000--Sobic004G211833 Sobic009G176000--Sobic002G190900 Sobic004G060500 Sobic004G060500 Sobic009G176000--Sobic004G060500 Sobic009G176000--Sobic002G418400 Sobic003G215700 Sobic003G215700 Sobic009G176000--Sobic003G215700 Sobic009G050300 Sobic009G050300 Sobic002G081600--Sobic009G050300 Sobic006G116700 Sobic006G116700 Sobic002G081600--Sobic006G116700 Sobic003G346600 Sobic003G346600 Sobic002G081600--Sobic003G346600 Sobic002G081600--Sobic009G215200 Sobic002G081600--Sobic001G374700 Sobic002G200600 Sobic002G200600 Sobic002G081600--Sobic002G200600 Sobic006G067800 Sobic006G067800 Sobic002G081600--Sobic006G067800 Sobic009G166500 Sobic009G166500 Sobic002G081600--Sobic009G166500 Sobic001G403500 Sobic001G403500 Sobic002G081600--Sobic001G403500 Sobic005G188100--Sobic002G190900 Sobic009G163800 Sobic009G163800 Sobic005G188100--Sobic009G163800 Sobic005G188100--Sobic002G398901 Sobic005G188100--Sobic010G204500 Sobic005G188100--Sobic009G166500 Sobic005G188100--Sobic007G051000 Sobic006G047400 Sobic006G047400 Sobic005G188100--Sobic006G047400 Sobic005G188100--Sobic010G012500 Sobic005G188100--Sobic004G211833 Sobic004G187900 Sobic004G187900 Sobic001G281400--Sobic004G187900 Sobic002G267500 Sobic002G267500 Sobic001G281400--Sobic002G267500 Sobic010G149300 Sobic010G149300 Sobic001G281400--Sobic010G149300 Sobic001G281400--Sobic002G190900 Sobic002G046100 Sobic002G046100 Sobic001G281400--Sobic002G046100 Sobic010G086200 Sobic010G086200 Sobic001G281400--Sobic010G086200 Sobic009G141800 Sobic009G141800 Sobic001G281400--Sobic009G141800 Sobic009G008900 Sobic009G008900 Sobic001G281400--Sobic009G008900 Sobic001G499300 Sobic001G499300 Sobic001G281400--Sobic001G499300 Sobic004G211833--Sobic010G012500 Sobic004G211833--Sobic006G083500 Sobic004G211833--Sobic002G398901 Sobic004G211833--Sobic004G220000 Sobic004G211833--Sobic007G051000 Sobic004G211833--Sobic009G176000 Sobic004G211833--Sobic002G418400 Sobic004G211833--Sobic002G190900 Sobic004G211833--Sobic003G215700 Sobic002G175100 Sobic002G175100 Sobic001G374700--Sobic002G175100 Sobic007G184600 Sobic007G184600 Sobic001G374700--Sobic007G184600 Sobic001G402050 Sobic001G402050 Sobic001G374700--Sobic001G402050 Sobic001G374700--Sobic002G081600 Sobic001G374700--Sobic006G047400 Sobic001G374700--Sobic009G215200 Sobic001G374700--Sobic002G200600 Sobic001G374700--Sobic006G116700 Sobic001G493001 Sobic001G493001 Sobic001G374700--Sobic001G493001
Octagon: transcription factors


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