Gene annotation
Transcriptome id Sobic.002G187500.1
Synonym Sb02g023550
Functional annotation hypoxia-responsive family protein, putative, expressed
UniProt C5XBE1
Pfam PF04588
Panther DB PTHR12297
NCBI CDD KOG4431; Uncharacterized protein, induced by hypoxia
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G48030 : hypoxia-responsive family protein / zinc finger (C3HC4-type RING finger) family protein
RAP-DB (Rice) LOC_Os09g20900.1 : hypoxia-responsive family protein, putative, expressed
MaizeGDB (Corn) Zm00025a046771
Brachypodium -
Barley -
Wheat TraesCS5D02G203900 , TraesCS5A02G187200 , TraesCS5B02G196700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G009300 6-phosphogluconate dehydrogenase, decarboxylating, putative, expressed K00033: PGD, gnd, 6-phosphogluconate dehydrogenase
2 Sobic.003G285800 ubiquitin domain-containing protein 1, putative, expressed -
3 Sobic.002G190900 expressed protein -
4 Sobic.002G046100 zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
5 Sobic.003G072300 triosephosphate isomerase(PubMedID : 27016024)@triosephosphate isomerase, cytosolic, putative, expressed K01803: TPI, triosephosphate isomerase (TIM)
6 Sobic.001G177800 ribosomal protein, putative, expressed K02866: RP-L10e, large subunit ribosomal protein L10e
7 Sobic.002G081600 ribosomal protein L7Ae, putative, expressed K02951: RP-S12e, small subunit ribosomal protein S12e
8 Sobic.001G281400 expressed protein -
9 Sobic.003G393700 zinc finger, RING-type, putative, expressed -
10 Sobic.003G321700 KH domain containing protein, putative, expressed K11884: PNO1, RNA-binding protein PNO1
11 Sobic.001G070800 expressed protein -
12 Sobic.001G340500 LSM domain containing protein, expressed K11099: SNRPG, small nuclear ribonucleoprotein G
13 Sobic.002G414600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@hypoxia-responsive family protein, putative, expressed -
14 Sobic.007G184600 60S ribosomal protein L38, putative, expressed K02923: RP-L38e, large subunit ribosomal protein L38e
15 Sobic.002G398901 - -
16 Sobic.009G139400 expressed protein -
17 Sobic.006G147000 ribosomal protein L14, putative, expressed K02875: RP-L14e, large subunit ribosomal protein L14e
18 Sobic.001G119400 microsomal glutathione S-transferase 3, putative, expressed K00799: GST, glutathione S-transferase
19 Sobic.003G350300 ubiquitin-conjugating enzyme, putative, expressed K10575: UBE2G1, ubiquitin-conjugating enzyme E2 G1
20 Sobic.009G077800 expressed protein -


Gene co-expression network
sample Sobic002G187500 Sobic002G187500 Sobic010G009300 Sobic010G009300 Sobic002G187500--Sobic010G009300 Sobic003G285800 Sobic003G285800 Sobic002G187500--Sobic003G285800 Sobic002G190900 Sobic002G190900 Sobic002G187500--Sobic002G190900 Sobic002G046100 Sobic002G046100 Sobic002G187500--Sobic002G046100 Sobic003G072300 Sobic003G072300 Sobic002G187500--Sobic003G072300 Sobic001G177800 Sobic001G177800 Sobic002G187500--Sobic001G177800 Sobic002G081600 Sobic002G081600 Sobic002G187500--Sobic002G081600 Sobic001G281400 Sobic001G281400 Sobic002G187500--Sobic001G281400 Sobic003G393700 Sobic003G393700 Sobic002G187500--Sobic003G393700 Sobic010G009300--Sobic001G177800 Sobic007G184600 Sobic007G184600 Sobic010G009300--Sobic007G184600 Sobic009G139400 Sobic009G139400 Sobic010G009300--Sobic009G139400 Sobic010G009300--Sobic002G187500 Sobic010G009300--Sobic002G190900 Sobic001G252300 Sobic001G252300 Sobic010G009300--Sobic001G252300 Sobic009G077800 Sobic009G077800 Sobic010G009300--Sobic009G077800 Sobic006G099900 Sobic006G099900 Sobic010G009300--Sobic006G099900 Sobic004G107700 Sobic004G107700 Sobic010G009300--Sobic004G107700 Sobic003G285800--Sobic002G046100 Sobic003G285800--Sobic002G187500 Sobic010G178200 Sobic010G178200 Sobic003G285800--Sobic010G178200 Sobic003G350300 Sobic003G350300 Sobic003G285800--Sobic003G350300 Sobic002G345300 Sobic002G345300 Sobic003G285800--Sobic002G345300 Sobic001G477300 Sobic001G477300 Sobic003G285800--Sobic001G477300 Sobic003G285800--Sobic001G281400 Sobic010G086200 Sobic010G086200 Sobic003G285800--Sobic010G086200 Sobic009G129000 Sobic009G129000 Sobic003G285800--Sobic009G129000 Sobic002G398901 Sobic002G398901 Sobic002G190900--Sobic002G398901 Sobic010G012500 Sobic010G012500 Sobic002G190900--Sobic010G012500 Sobic007G051000 Sobic007G051000 Sobic002G190900--Sobic007G051000 Sobic009G176000 Sobic009G176000 Sobic002G190900--Sobic009G176000 Sobic002G190900--Sobic002G081600 Sobic005G188100 Sobic005G188100 Sobic002G190900--Sobic005G188100 Sobic002G190900--Sobic001G281400 Sobic004G211833 Sobic004G211833 Sobic002G190900--Sobic004G211833 Sobic001G374700 Sobic001G374700 Sobic002G190900--Sobic001G374700 Sobic002G046100--Sobic003G285800 Sobic002G046100--Sobic001G281400 Sobic002G046100--Sobic002G345300 Sobic002G046100--Sobic002G187500 Sobic002G046100--Sobic010G086200 Sobic004G061200 Sobic004G061200 Sobic002G046100--Sobic004G061200 Sobic002G046100--Sobic001G477300 Sobic002G267500 Sobic002G267500 Sobic002G046100--Sobic002G267500 Sobic002G046100--Sobic002G190900 Sobic003G072300--Sobic002G081600 Sobic004G205100 Sobic004G205100 Sobic003G072300--Sobic004G205100 Sobic003G072300--Sobic002G187500 Sobic003G209000 Sobic003G209000 Sobic003G072300--Sobic003G209000 Sobic003G072300--Sobic002G190900 Sobic006G213000 Sobic006G213000 Sobic003G072300--Sobic006G213000 Sobic010G204500 Sobic010G204500 Sobic003G072300--Sobic010G204500 Sobic003G155400 Sobic003G155400 Sobic003G072300--Sobic003G155400 Sobic002G379500 Sobic002G379500 Sobic003G072300--Sobic002G379500 Sobic001G177800--Sobic007G184600 Sobic001G177800--Sobic009G139400 Sobic001G177800--Sobic001G374700 Sobic001G402050 Sobic001G402050 Sobic001G177800--Sobic001G402050 Sobic007G227300 Sobic007G227300 Sobic001G177800--Sobic007G227300 Sobic002G200600 Sobic002G200600 Sobic001G177800--Sobic002G200600 Sobic004G189400 Sobic004G189400 Sobic001G177800--Sobic004G189400 Sobic001G177800--Sobic006G099900 Sobic001G177800--Sobic010G009300 Sobic009G050300 Sobic009G050300 Sobic002G081600--Sobic009G050300 Sobic006G116700 Sobic006G116700 Sobic002G081600--Sobic006G116700 Sobic003G346600 Sobic003G346600 Sobic002G081600--Sobic003G346600 Sobic009G215200 Sobic009G215200 Sobic002G081600--Sobic009G215200 Sobic002G081600--Sobic001G374700 Sobic002G081600--Sobic002G200600 Sobic006G067800 Sobic006G067800 Sobic002G081600--Sobic006G067800 Sobic009G166500 Sobic009G166500 Sobic002G081600--Sobic009G166500 Sobic001G403500 Sobic001G403500 Sobic002G081600--Sobic001G403500 Sobic004G187900 Sobic004G187900 Sobic001G281400--Sobic004G187900 Sobic001G281400--Sobic002G267500 Sobic010G149300 Sobic010G149300 Sobic001G281400--Sobic010G149300 Sobic001G281400--Sobic002G190900 Sobic001G281400--Sobic002G046100 Sobic001G281400--Sobic010G086200 Sobic009G141800 Sobic009G141800 Sobic001G281400--Sobic009G141800 Sobic009G008900 Sobic009G008900 Sobic001G281400--Sobic009G008900 Sobic001G499300 Sobic001G499300 Sobic001G281400--Sobic001G499300 Sobic003G393700--Sobic009G077800 Sobic001G070800 Sobic001G070800 Sobic003G393700--Sobic001G070800 Sobic009G234100 Sobic009G234100 Sobic003G393700--Sobic009G234100 Sobic003G393700--Sobic009G139400 Sobic004G321300 Sobic004G321300 Sobic003G393700--Sobic004G321300 Sobic003G297600 Sobic003G297600 Sobic003G393700--Sobic003G297600 Sobic002G393000 Sobic002G393000 Sobic003G393700--Sobic002G393000 Sobic003G393700--Sobic004G061200 Sobic003G393700--Sobic001G177800
Octagon: transcription factors


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