Gene annotation
Transcriptome id Sobic.006G147000.2
Synonym Sb06g022580
Functional annotation ribosomal protein L14, putative, expressed
UniProt C5YC29
Pfam PF01929
Panther DB PTHR11127 PTHR11127:SF3
NCBI CDD KOG3421; 60S ribosomal protein L14
KEGG Orthology K02875; RP-L14e, large subunit ribosomal protein L14e
Gene Ontology GO:0006412; translation GO:0005840ribosome GO:0005622intracellular GO:0003735structural constituent of ribosome


Orthologs (automatic annotation)
TAIR AT2G20450 : Ribosomal protein L14
RAP-DB (Rice) LOC_Os02g40880.1 : ribosomal protein L14, putative, expressed
MaizeGDB (Corn) Zm00025a056507 , Zm00025a047972 , Zm00025a014503
Brachypodium KQJ83571 , KQK12844
Barley HORVU2Hr1G089070.2 , HORVU2Hr1G089070.1 , HORVU2Hr1G089090.1 , HORVU6Hr1G058560.2 , HORVU6Hr1G058560.3 , HORVU6Hr1G058560.1
Wheat TraesCS6D02G209400 , TraesCS2B02G400600 , TraesCS2A02G383600 , TraesCS6B02G256900
Populus -


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cDNA sequences
Sobic.006G147000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G346600 40S ribosomal protein S23, putative, expressed K02973: RP-S23e, small subunit ribosomal protein S23e
2 Sobic.009G163800 60S ribosomal protein L36-2, putative, expressed K02920: RP-L36e, large subunit ribosomal protein L36e
3 Sobic.010G060500 60S ribosomal protein L23A, putative, expressed K02893: RP-L23Ae, large subunit ribosomal protein L23Ae
4 Sobic.009G166500 40S ribosomal protein S23, putative, expressed K02973: RP-S23e, small subunit ribosomal protein S23e
5 Sobic.002G081600 ribosomal protein L7Ae, putative, expressed K02951: RP-S12e, small subunit ribosomal protein S12e
6 Sobic.007G178600 - K02966: RP-S19e, small subunit ribosomal protein S19e
7 Sobic.003G322400 40S ribosomal protein S25, putative, expressed K02975: RP-S25e, small subunit ribosomal protein S25e
8 Sobic.009G050300 60S ribosomal protein L18-3, putative, expressed K02883: RP-L18e, large subunit ribosomal protein L18e
9 Sobic.007G212600 40S ribosomal protein S15a, putative, expressed K02957: RP-S15Ae, small subunit ribosomal protein S15Ae
10 Sobic.009G215200 60S ribosomal protein L28-1, putative, expressed K02903: RP-L28e, large subunit ribosomal protein L28e
11 Sobic.002G286900 ribosomal protein L14, putative, expressed K02875: RP-L14e, large subunit ribosomal protein L14e
12 Sobic.001G016400 ribosomal protein L22, putative, expressed K02880: RP-L17e, large subunit ribosomal protein L17e
13 Sobic.001G091801 - K02978: RP-S27e, small subunit ribosomal protein S27e
14 Sobic.004G008400 ribosomal protein L37, putative, expressed K02922: RP-L37e, large subunit ribosomal protein L37e
15 Sobic.001G016500 ribosomal protein L22, putative, expressed K02880: RP-L17e, large subunit ribosomal protein L17e
16 Sobic.007G190800 mitochondrial import inner membrane translocase subunit Tim, putative, expressed K17780: mitochondrial import inner membrane translocase subunit TIM8
17 Sobic.007G184600 60S ribosomal protein L38, putative, expressed K02923: RP-L38e, large subunit ribosomal protein L38e
18 Sobic.007G138700 60S ribosomal protein L34, putative, expressed K02915: RP-L34e, large subunit ribosomal protein L34e
19 Sobic.004G331400 60S ribosomal protein L39, putative, expressed K02924: RP-L39e, large subunit ribosomal protein L39e
20 Sobic.007G019000 40S ribosomal protein S13, putative, expressed K02953: RP-S13e, small subunit ribosomal protein S13e


Gene co-expression network
sample Sobic006G147000 Sobic006G147000 Sobic003G346600 Sobic003G346600 Sobic006G147000--Sobic003G346600 Sobic009G163800 Sobic009G163800 Sobic006G147000--Sobic009G163800 Sobic010G060500 Sobic010G060500 Sobic006G147000--Sobic010G060500 Sobic009G166500 Sobic009G166500 Sobic006G147000--Sobic009G166500 Sobic002G081600 Sobic002G081600 Sobic006G147000--Sobic002G081600 Sobic007G178600 Sobic007G178600 Sobic006G147000--Sobic007G178600 Sobic003G322400 Sobic003G322400 Sobic006G147000--Sobic003G322400 Sobic009G050300 Sobic009G050300 Sobic006G147000--Sobic009G050300 Sobic007G212600 Sobic007G212600 Sobic006G147000--Sobic007G212600 Sobic003G346600--Sobic010G060500 Sobic003G346600--Sobic009G050300 Sobic003G346600--Sobic002G081600 Sobic003G346600--Sobic009G166500 Sobic004G008400 Sobic004G008400 Sobic003G346600--Sobic004G008400 Sobic003G346600--Sobic009G163800 Sobic003G346600--Sobic007G178600 Sobic006G116700 Sobic006G116700 Sobic003G346600--Sobic006G116700 Sobic006G137100 Sobic006G137100 Sobic003G346600--Sobic006G137100 Sobic009G163800--Sobic009G166500 Sobic009G163800--Sobic009G050300 Sobic009G163800--Sobic003G346600 Sobic007G138700 Sobic007G138700 Sobic009G163800--Sobic007G138700 Sobic006G047400 Sobic006G047400 Sobic009G163800--Sobic006G047400 Sobic003G408100 Sobic003G408100 Sobic009G163800--Sobic003G408100 Sobic004G331400 Sobic004G331400 Sobic009G163800--Sobic004G331400 Sobic009G163800--Sobic002G081600 Sobic001G091801 Sobic001G091801 Sobic009G163800--Sobic001G091801 Sobic010G060500--Sobic003G346600 Sobic010G060500--Sobic006G137100 Sobic010G060500--Sobic004G008400 Sobic010G060500--Sobic009G166500 Sobic010G060500--Sobic009G050300 Sobic010G060500--Sobic007G178600 Sobic002G255300 Sobic002G255300 Sobic010G060500--Sobic002G255300 Sobic006G213000 Sobic006G213000 Sobic010G060500--Sobic006G213000 Sobic010G060500--Sobic009G163800 Sobic009G166500--Sobic006G047400 Sobic009G166500--Sobic009G163800 Sobic009G166500--Sobic003G346600 Sobic009G166500--Sobic009G050300 Sobic009G166500--Sobic001G091801 Sobic009G166500--Sobic002G081600 Sobic001G374700 Sobic001G374700 Sobic009G166500--Sobic001G374700 Sobic001G403500 Sobic001G403500 Sobic009G166500--Sobic001G403500 Sobic009G166500--Sobic010G060500 Sobic002G081600--Sobic009G050300 Sobic002G081600--Sobic006G116700 Sobic002G081600--Sobic003G346600 Sobic009G215200 Sobic009G215200 Sobic002G081600--Sobic009G215200 Sobic002G081600--Sobic001G374700 Sobic002G200600 Sobic002G200600 Sobic002G081600--Sobic002G200600 Sobic006G067800 Sobic006G067800 Sobic002G081600--Sobic006G067800 Sobic002G081600--Sobic009G166500 Sobic002G081600--Sobic001G403500 Sobic007G178600--Sobic004G008400 Sobic007G019000 Sobic007G019000 Sobic007G178600--Sobic007G019000 Sobic007G178600--Sobic003G346600 Sobic007G178600--Sobic009G050300 Sobic008G108601 Sobic008G108601 Sobic007G178600--Sobic008G108601 Sobic006G221200 Sobic006G221200 Sobic007G178600--Sobic006G221200 Sobic007G178600--Sobic009G163800 Sobic003G249700 Sobic003G249700 Sobic007G178600--Sobic003G249700 Sobic002G047600 Sobic002G047600 Sobic007G178600--Sobic002G047600 Sobic003G322400--Sobic009G050300 Sobic003G322400--Sobic001G091801 Sobic003G322400--Sobic007G212600 Sobic003G322400--Sobic006G116700 Sobic001G054900 Sobic001G054900 Sobic003G322400--Sobic001G054900 Sobic003G322400--Sobic003G408100 Sobic003G322400--Sobic001G374700 Sobic003G322400--Sobic002G200600 Sobic007G184600 Sobic007G184600 Sobic003G322400--Sobic007G184600 Sobic009G050300--Sobic006G116700 Sobic009G050300--Sobic004G008400 Sobic007G197800 Sobic007G197800 Sobic009G050300--Sobic007G197800 Sobic009G050300--Sobic002G081600 Sobic009G050300--Sobic003G346600 Sobic009G050300--Sobic009G215200 Sobic009G050300--Sobic001G403500 Sobic001G018900 Sobic001G018900 Sobic009G050300--Sobic001G018900 Sobic002G379500 Sobic002G379500 Sobic009G050300--Sobic002G379500 Sobic007G212600--Sobic001G091801 Sobic007G212600--Sobic003G322400 Sobic007G212600--Sobic001G374700 Sobic007G212600--Sobic009G166500 Sobic001G016400 Sobic001G016400 Sobic007G212600--Sobic001G016400 Sobic003G321700 Sobic003G321700 Sobic007G212600--Sobic003G321700 Sobic004G104100 Sobic004G104100 Sobic007G212600--Sobic004G104100 Sobic010G260100 Sobic010G260100 Sobic007G212600--Sobic010G260100 Sobic007G212600--Sobic009G050300
Octagon: transcription factors


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