Gene annotation
Transcriptome id Sobic.009G023200.1
Synonym Sb09g001970
Functional annotation glycine-rich protein A3, putative, expressed
UniProt A0A1B1SPY0 , C5YZ07
Pfam -
Panther DB PTHR31248
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os08g28560.1 : expressed protein
MaizeGDB (Corn) Zm00025a040787 , Zm00025a040788
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.009G023200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G187900 riboflavin biosynthesis protein ribAB, chloroplast precursor, putative, expressed K14652: 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II
2 Sobic.010G204600 SNF7 domain containing protein, putative, expressed K12197: CHMP1, VPS46, charged multivesicular body protein 1
3 Sobic.003G063200 uncharacterized Cys-rich domain containing protein, putative, expressed -
4 Sobic.001G067601 - K17553: protein phosphatase 1 regulatory subunit 11
5 Sobic.002G046100 zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
6 Sobic.002G245800 AN1-like zinc finger domain containing protein, expressed -
7 Sobic.003G181500 ZOS1-09 - C2H2 zinc finger protein, expressed -
8 Sobic.003G202200 uncharacterized protein PA4923, putative, expressed K06966: pyrimidine/purine-5'-nucleotide nucleosidase
9 Sobic.005G196800 membrane protein, putative, expressed -
10 Sobic.001G477300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@GRAM domain containing protein, expressed -
11 Sobic.003G350300 ubiquitin-conjugating enzyme, putative, expressed K10575: UBE2G1, ubiquitin-conjugating enzyme E2 G1
12 Sobic.001G019900 zinc finger, C3HC4 type domain containing protein, expressed K15707: RING finger protein 170
13 Sobic.001G281400 expressed protein -
14 Sobic.001G477600 zinc finger protein, putative, expressed -
15 Sobic.009G247900 similar to Putative late embryogenesis abundant protein(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@late embryogenesis abundant protein, putative, expressed -
16 Sobic.001G124600 - -
17 Sobic.002G312400 domain of unknown function domain containing protein, expressed -
18 Sobic.001G390300 OsCam1-1 - Calmodulin, expressed K02183: calmodulin
19 Sobic.004G157000 protein kinase domain containing protein, expressed K13430: serine/threonine-protein kinase PBS1
20 Sobic.002G336600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@nucleoside transporter, putative, expressed K15014: SLC29A1_2_3, solute carrier family 29 (equilibrative nucleoside transporter), member 1/2/3


Gene co-expression network
sample Sobic009G023200 Sobic009G023200 Sobic004G187900 Sobic004G187900 Sobic009G023200--Sobic004G187900 Sobic010G204600 Sobic010G204600 Sobic009G023200--Sobic010G204600 Sobic003G063200 Sobic003G063200 Sobic009G023200--Sobic003G063200 Sobic001G067601 Sobic001G067601 Sobic009G023200--Sobic001G067601 Sobic002G046100 Sobic002G046100 Sobic009G023200--Sobic002G046100 Sobic002G245800 Sobic002G245800 Sobic009G023200--Sobic002G245800 Sobic003G181500 Sobic003G181500 Sobic009G023200--Sobic003G181500 Sobic003G202200 Sobic003G202200 Sobic009G023200--Sobic003G202200 Sobic005G196800 Sobic005G196800 Sobic009G023200--Sobic005G196800 Sobic001G281400 Sobic001G281400 Sobic004G187900--Sobic001G281400 Sobic001G124600 Sobic001G124600 Sobic004G187900--Sobic001G124600 Sobic002G140400 Sobic002G140400 Sobic004G187900--Sobic002G140400 Sobic009G141800 Sobic009G141800 Sobic004G187900--Sobic009G141800 Sobic004G321300 Sobic004G321300 Sobic004G187900--Sobic004G321300 Sobic003G350300 Sobic003G350300 Sobic004G187900--Sobic003G350300 Sobic009G008900 Sobic009G008900 Sobic004G187900--Sobic009G008900 Sobic001G477300 Sobic001G477300 Sobic004G187900--Sobic001G477300 Sobic008G136400 Sobic008G136400 Sobic004G187900--Sobic008G136400 Sobic001G095300 Sobic001G095300 Sobic010G204600--Sobic001G095300 Sobic010G204600--Sobic003G063200 Sobic002G405600 Sobic002G405600 Sobic010G204600--Sobic002G405600 Sobic004G157000 Sobic004G157000 Sobic010G204600--Sobic004G157000 Sobic010G204600--Sobic009G023200 Sobic009G129000 Sobic009G129000 Sobic010G204600--Sobic009G129000 Sobic001G055600 Sobic001G055600 Sobic010G204600--Sobic001G055600 Sobic010G204600--Sobic003G202200 Sobic009G033700 Sobic009G033700 Sobic010G204600--Sobic009G033700 Sobic005G028700 Sobic005G028700 Sobic003G063200--Sobic005G028700 Sobic003G063200--Sobic010G204600 Sobic004G247200 Sobic004G247200 Sobic003G063200--Sobic004G247200 Sobic003G063200--Sobic001G055600 Sobic001G037000 Sobic001G037000 Sobic003G063200--Sobic001G037000 Sobic003G063200--Sobic009G023200 Sobic001G390300 Sobic001G390300 Sobic003G063200--Sobic001G390300 Sobic004G306300 Sobic004G306300 Sobic003G063200--Sobic004G306300 Sobic002G407900 Sobic002G407900 Sobic003G063200--Sobic002G407900 Sobic001G019900 Sobic001G019900 Sobic001G067601--Sobic001G019900 Sobic001G067601--Sobic009G023200 Sobic001G067601--Sobic002G046100 Sobic010G217900 Sobic010G217900 Sobic001G067601--Sobic010G217900 Sobic001G067601--Sobic003G063200 Sobic001G067601--Sobic001G037000 Sobic005G228000 Sobic005G228000 Sobic001G067601--Sobic005G228000 Sobic001G067601--Sobic003G181500 Sobic003G162700 Sobic003G162700 Sobic001G067601--Sobic003G162700 Sobic003G285800 Sobic003G285800 Sobic002G046100--Sobic003G285800 Sobic002G046100--Sobic001G281400 Sobic002G345300 Sobic002G345300 Sobic002G046100--Sobic002G345300 Sobic002G187500 Sobic002G187500 Sobic002G046100--Sobic002G187500 Sobic010G086200 Sobic010G086200 Sobic002G046100--Sobic010G086200 Sobic004G061200 Sobic004G061200 Sobic002G046100--Sobic004G061200 Sobic002G046100--Sobic001G477300 Sobic002G267500 Sobic002G267500 Sobic002G046100--Sobic002G267500 Sobic002G190900 Sobic002G190900 Sobic002G046100--Sobic002G190900 Sobic002G245800--Sobic002G405600 Sobic001G040200 Sobic001G040200 Sobic002G245800--Sobic001G040200 Sobic003G324400 Sobic003G324400 Sobic002G245800--Sobic003G324400 Sobic009G247900 Sobic009G247900 Sobic002G245800--Sobic009G247900 Sobic001G422900 Sobic001G422900 Sobic002G245800--Sobic001G422900 Sobic002G245800--Sobic009G023200 Sobic002G245800--Sobic001G095300 Sobic002G140300 Sobic002G140300 Sobic002G245800--Sobic002G140300 Sobic006G179500 Sobic006G179500 Sobic002G245800--Sobic006G179500 Sobic003G181500--Sobic004G187900 Sobic003G181500--Sobic003G350300 Sobic010G149300 Sobic010G149300 Sobic003G181500--Sobic010G149300 Sobic003G249800 Sobic003G249800 Sobic003G181500--Sobic003G249800 Sobic001G288800 Sobic001G288800 Sobic003G181500--Sobic001G288800 Sobic003G181500--Sobic001G281400 Sobic003G181500--Sobic009G023200 Sobic002G211900 Sobic002G211900 Sobic003G181500--Sobic002G211900 Sobic003G181500--Sobic002G046100 Sobic001G481100 Sobic001G481100 Sobic003G202200--Sobic001G481100 Sobic003G202200--Sobic009G247900 Sobic001G383700 Sobic001G383700 Sobic003G202200--Sobic001G383700 Sobic001G449700 Sobic001G449700 Sobic003G202200--Sobic001G449700 Sobic003G021500 Sobic003G021500 Sobic003G202200--Sobic003G021500 Sobic003G228900 Sobic003G228900 Sobic003G202200--Sobic003G228900 Sobic004G191400 Sobic004G191400 Sobic003G202200--Sobic004G191400 Sobic003G364600 Sobic003G364600 Sobic003G202200--Sobic003G364600 Sobic009G036000 Sobic009G036000 Sobic003G202200--Sobic009G036000 Sobic001G247300 Sobic001G247300 Sobic005G196800--Sobic001G247300 Sobic004G237800 Sobic004G237800 Sobic005G196800--Sobic004G237800 Sobic005G196800--Sobic001G390300 Sobic002G338500 Sobic002G338500 Sobic005G196800--Sobic002G338500 Sobic005G196800--Sobic004G321300 Sobic006G183400 Sobic006G183400 Sobic005G196800--Sobic006G183400 Sobic003G382600 Sobic003G382600 Sobic005G196800--Sobic003G382600 Sobic003G043600 Sobic003G043600 Sobic005G196800--Sobic003G043600 Sobic002G055700 Sobic002G055700 Sobic005G196800--Sobic002G055700
Octagon: transcription factors


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