Gene annotation
Transcriptome id Sobic.004G157000.1
Synonym Sb04g020990, PBS1
Functional annotation protein kinase domain containing protein, expressed
UniProt C5XSN6
Pfam PF00069
Panther DB PTHR27001 PTHR27001:SF42
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology K13430; serine/threonine-protein kinase PBS1
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT5G13160 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os02g30900.1 : protein kinase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a020435 , Zm00025a031349
Brachypodium KQJ99610 , KQJ82392 , KQJ82393
Barley -
Wheat TraesCS7B02G325900
Populus -


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cDNA sequences
Sobic.004G157000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G204600 SNF7 domain containing protein, putative, expressed K12197: CHMP1, VPS46, charged multivesicular body protein 1
2 Sobic.009G046600 stress-related protein, putative, expressed -
3 Sobic.003G249800 60S ribosomal protein L18a-1, putative, expressed -
4 Sobic.002G046100 zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
5 Sobic.009G129000 E3 ubiquitin-protein ligase MGRN1, putative, expressed -
6 Sobic.009G023200 glycine-rich protein A3, putative, expressed -
7 Sobic.009G033700 protein kinase, putative, expressed K13436: pto-interacting protein 1
8 Sobic.002G345300 ZOS7-05 - C2H2 zinc finger protein, expressed -
9 Sobic.003G285800 ubiquitin domain-containing protein 1, putative, expressed -
10 Sobic.001G019900 zinc finger, C3HC4 type domain containing protein, expressed K15707: RING finger protein 170
11 Sobic.005G228000 SNF7 domain containing protein, putative, expressed K12191: charged multivesicular body protein 2A
12 Sobic.003G063200 uncharacterized Cys-rich domain containing protein, putative, expressed -
13 Sobic.002G312400 domain of unknown function domain containing protein, expressed -
14 Sobic.005G028700 peflin, putative, expressed K13448: calcium-binding protein CML
15 Sobic.001G477300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@GRAM domain containing protein, expressed -
16 Sobic.003G350300 ubiquitin-conjugating enzyme, putative, expressed K10575: UBE2G1, ubiquitin-conjugating enzyme E2 G1
17 Sobic.003G181500 ZOS1-09 - C2H2 zinc finger protein, expressed -
18 Sobic.001G281400 expressed protein -
19 Sobic.010G086200 GRAM domain containing protein, expressed -
20 Sobic.001G445800 expressed protein -


Gene co-expression network
sample Sobic004G157000 Sobic004G157000 Sobic010G204600 Sobic010G204600 Sobic004G157000--Sobic010G204600 Sobic009G046600 Sobic009G046600 Sobic004G157000--Sobic009G046600 Sobic003G249800 Sobic003G249800 Sobic004G157000--Sobic003G249800 Sobic002G046100 Sobic002G046100 Sobic004G157000--Sobic002G046100 Sobic009G129000 Sobic009G129000 Sobic004G157000--Sobic009G129000 Sobic009G023200 Sobic009G023200 Sobic004G157000--Sobic009G023200 Sobic009G033700 Sobic009G033700 Sobic004G157000--Sobic009G033700 Sobic002G345300 Sobic002G345300 Sobic004G157000--Sobic002G345300 Sobic003G285800 Sobic003G285800 Sobic004G157000--Sobic003G285800 Sobic001G095300 Sobic001G095300 Sobic010G204600--Sobic001G095300 Sobic003G063200 Sobic003G063200 Sobic010G204600--Sobic003G063200 Sobic002G405600 Sobic002G405600 Sobic010G204600--Sobic002G405600 Sobic010G204600--Sobic004G157000 Sobic010G204600--Sobic009G023200 Sobic010G204600--Sobic009G129000 Sobic001G055600 Sobic001G055600 Sobic010G204600--Sobic001G055600 Sobic003G202200 Sobic003G202200 Sobic010G204600--Sobic003G202200 Sobic010G204600--Sobic009G033700 Sobic009G046600--Sobic004G157000 Sobic005G028700 Sobic005G028700 Sobic009G046600--Sobic005G028700 Sobic009G046600--Sobic009G129000 Sobic001G399100 Sobic001G399100 Sobic009G046600--Sobic001G399100 Sobic010G041700 Sobic010G041700 Sobic009G046600--Sobic010G041700 Sobic009G046600--Sobic009G023200 Sobic002G245800 Sobic002G245800 Sobic009G046600--Sobic002G245800 Sobic010G178200 Sobic010G178200 Sobic009G046600--Sobic010G178200 Sobic007G151100 Sobic007G151100 Sobic009G046600--Sobic007G151100 Sobic008G161000 Sobic008G161000 Sobic003G249800--Sobic008G161000 Sobic001G037000 Sobic001G037000 Sobic003G249800--Sobic001G037000 Sobic003G249800--Sobic009G033700 Sobic003G249800--Sobic002G046100 Sobic002G282400 Sobic002G282400 Sobic003G249800--Sobic002G282400 Sobic002G330000 Sobic002G330000 Sobic003G249800--Sobic002G330000 Sobic009G143400 Sobic009G143400 Sobic003G249800--Sobic009G143400 Sobic002G211900 Sobic002G211900 Sobic003G249800--Sobic002G211900 Sobic003G181500 Sobic003G181500 Sobic003G249800--Sobic003G181500 Sobic002G046100--Sobic003G285800 Sobic001G281400 Sobic001G281400 Sobic002G046100--Sobic001G281400 Sobic002G046100--Sobic002G345300 Sobic002G187500 Sobic002G187500 Sobic002G046100--Sobic002G187500 Sobic010G086200 Sobic010G086200 Sobic002G046100--Sobic010G086200 Sobic004G061200 Sobic004G061200 Sobic002G046100--Sobic004G061200 Sobic001G477300 Sobic001G477300 Sobic002G046100--Sobic001G477300 Sobic002G267500 Sobic002G267500 Sobic002G046100--Sobic002G267500 Sobic002G190900 Sobic002G190900 Sobic002G046100--Sobic002G190900 Sobic009G129000--Sobic010G086200 Sobic009G129000--Sobic005G028700 Sobic009G183300 Sobic009G183300 Sobic009G129000--Sobic009G183300 Sobic009G129000--Sobic009G033700 Sobic009G200700 Sobic009G200700 Sobic009G129000--Sobic009G200700 Sobic004G065500 Sobic004G065500 Sobic009G129000--Sobic004G065500 Sobic010G217800 Sobic010G217800 Sobic009G129000--Sobic010G217800 Sobic006G267200 Sobic006G267200 Sobic009G129000--Sobic006G267200 Sobic009G129000--Sobic010G204600 Sobic004G187900 Sobic004G187900 Sobic009G023200--Sobic004G187900 Sobic009G023200--Sobic010G204600 Sobic009G023200--Sobic003G063200 Sobic001G067601 Sobic001G067601 Sobic009G023200--Sobic001G067601 Sobic009G023200--Sobic002G046100 Sobic009G023200--Sobic002G245800 Sobic009G023200--Sobic003G181500 Sobic009G023200--Sobic003G202200 Sobic005G196800 Sobic005G196800 Sobic009G023200--Sobic005G196800 Sobic009G033700--Sobic010G086200 Sobic003G037800 Sobic003G037800 Sobic009G033700--Sobic003G037800 Sobic009G033700--Sobic001G281400 Sobic009G033700--Sobic003G249800 Sobic007G198100 Sobic007G198100 Sobic009G033700--Sobic007G198100 Sobic009G033700--Sobic009G129000 Sobic002G245100 Sobic002G245100 Sobic009G033700--Sobic002G245100 Sobic009G033700--Sobic009G143400 Sobic009G033700--Sobic004G065500 Sobic002G345300--Sobic002G046100 Sobic003G350300 Sobic003G350300 Sobic002G345300--Sobic003G350300 Sobic002G345300--Sobic001G281400 Sobic002G345300--Sobic010G178200 Sobic002G345300--Sobic002G267500 Sobic003G253000 Sobic003G253000 Sobic002G345300--Sobic003G253000 Sobic002G345300--Sobic003G285800 Sobic004G272800 Sobic004G272800 Sobic002G345300--Sobic004G272800 Sobic010G149300 Sobic010G149300 Sobic002G345300--Sobic010G149300 Sobic003G285800--Sobic002G046100 Sobic003G285800--Sobic002G187500 Sobic003G285800--Sobic010G178200 Sobic003G285800--Sobic003G350300 Sobic003G285800--Sobic002G345300 Sobic003G285800--Sobic001G477300 Sobic003G285800--Sobic001G281400 Sobic003G285800--Sobic010G086200 Sobic003G285800--Sobic009G129000
Octagon: transcription factors


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