Gene annotation
Transcriptome id Sobic.009G046600.1,Sobic.009G046600.2
Synonym Sb09g004000
Functional annotation stress-related protein, putative, expressed
UniProt C5Z060
Pfam PF05755
Panther DB PTHR33732 PTHR33732:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G05500 : Rubber elongation factor protein (REF)
RAP-DB (Rice) LOC_Os05g05940.1 : stress-related protein, putative, expressed
MaizeGDB (Corn) Zm00025a038061
Brachypodium KQK07459
Barley HORVU1Hr1G021780.5 , HORVU1Hr1G021780.4 , HORVU1Hr1G021780.7 , HORVU1Hr1G021780.6 , HORVU1Hr1G021780.1 , HORVU1Hr1G021780.9 , HORVU1Hr1G021780.8 , HORVU1Hr1G021780.11 , HORVU1Hr1G021780.10
Wheat TraesCS1D02G102400 , TraesCS1A02G093800
Populus -


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cDNA sequences
Sobic.009G046600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G157000 protein kinase domain containing protein, expressed K13430: serine/threonine-protein kinase PBS1
2 Sobic.005G028700 peflin, putative, expressed K13448: calcium-binding protein CML
3 Sobic.009G129000 E3 ubiquitin-protein ligase MGRN1, putative, expressed -
4 Sobic.001G399100 peroxisomal biogenesis factor 11, putative, expressed -
5 Sobic.010G041700 B-box (BBX) protein(PubMedID : 30626335)@B-box zinc finger family protein, putative, expressed -
6 Sobic.009G023200 glycine-rich protein A3, putative, expressed -
7 Sobic.002G245800 AN1-like zinc finger domain containing protein, expressed -
8 Sobic.010G178200 hemoglobin-like protein HbO, putative, expressed -
9 Sobic.007G151100 12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
10 Sobic.002G312400 domain of unknown function domain containing protein, expressed -
11 Sobic.010G086200 GRAM domain containing protein, expressed -
12 Sobic.003G285800 ubiquitin domain-containing protein 1, putative, expressed -
13 Sobic.002G046100 zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
14 Sobic.002G374100 tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@zinc-finger protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
15 Sobic.010G204600 SNF7 domain containing protein, putative, expressed K12197: CHMP1, VPS46, charged multivesicular body protein 1
16 Sobic.004G186500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@gibberellin receptor GID1L2, putative, expressed -
17 Sobic.002G405600 early response to dehydration 15, putative, expressed -
18 Sobic.001G281400 expressed protein -
19 Sobic.001G483400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lipoxygenase protein, putative, expressed K00454: lipoxygenase
20 Sobic.001G040200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NAC domain-containing protein 67, putative, expressed -


Gene co-expression network
sample Sobic009G046600 Sobic009G046600 Sobic004G157000 Sobic004G157000 Sobic009G046600--Sobic004G157000 Sobic005G028700 Sobic005G028700 Sobic009G046600--Sobic005G028700 Sobic009G129000 Sobic009G129000 Sobic009G046600--Sobic009G129000 Sobic001G399100 Sobic001G399100 Sobic009G046600--Sobic001G399100 Sobic010G041700 Sobic010G041700 Sobic009G046600--Sobic010G041700 Sobic009G023200 Sobic009G023200 Sobic009G046600--Sobic009G023200 Sobic002G245800 Sobic002G245800 Sobic009G046600--Sobic002G245800 Sobic010G178200 Sobic010G178200 Sobic009G046600--Sobic010G178200 Sobic007G151100 Sobic007G151100 Sobic009G046600--Sobic007G151100 Sobic010G204600 Sobic010G204600 Sobic004G157000--Sobic010G204600 Sobic004G157000--Sobic009G046600 Sobic003G249800 Sobic003G249800 Sobic004G157000--Sobic003G249800 Sobic002G046100 Sobic002G046100 Sobic004G157000--Sobic002G046100 Sobic004G157000--Sobic009G129000 Sobic004G157000--Sobic009G023200 Sobic009G033700 Sobic009G033700 Sobic004G157000--Sobic009G033700 Sobic002G345300 Sobic002G345300 Sobic004G157000--Sobic002G345300 Sobic003G285800 Sobic003G285800 Sobic004G157000--Sobic003G285800 Sobic003G063200 Sobic003G063200 Sobic005G028700--Sobic003G063200 Sobic005G028700--Sobic009G129000 Sobic010G086200 Sobic010G086200 Sobic005G028700--Sobic010G086200 Sobic004G065500 Sobic004G065500 Sobic005G028700--Sobic004G065500 Sobic004G247200 Sobic004G247200 Sobic005G028700--Sobic004G247200 Sobic005G028700--Sobic007G151100 Sobic002G356101 Sobic002G356101 Sobic005G028700--Sobic002G356101 Sobic001G477300 Sobic001G477300 Sobic005G028700--Sobic001G477300 Sobic004G306300 Sobic004G306300 Sobic005G028700--Sobic004G306300 Sobic009G129000--Sobic010G086200 Sobic009G129000--Sobic005G028700 Sobic009G183300 Sobic009G183300 Sobic009G129000--Sobic009G183300 Sobic009G129000--Sobic009G033700 Sobic009G200700 Sobic009G200700 Sobic009G129000--Sobic009G200700 Sobic009G129000--Sobic004G065500 Sobic010G217800 Sobic010G217800 Sobic009G129000--Sobic010G217800 Sobic006G267200 Sobic006G267200 Sobic009G129000--Sobic006G267200 Sobic009G129000--Sobic010G204600 Sobic001G399100--Sobic009G033700 Sobic001G399100--Sobic009G046600 Sobic010G107100 Sobic010G107100 Sobic001G399100--Sobic010G107100 Sobic004G186500 Sobic004G186500 Sobic001G399100--Sobic004G186500 Sobic003G019200 Sobic003G019200 Sobic001G399100--Sobic003G019200 Sobic001G399100--Sobic009G200700 Sobic001G399100--Sobic005G028700 Sobic005G229700 Sobic005G229700 Sobic001G399100--Sobic005G229700 Sobic001G399100--Sobic010G086200 Sobic010G041700--Sobic009G046600 Sobic005G010200 Sobic005G010200 Sobic010G041700--Sobic005G010200 Sobic006G089300 Sobic006G089300 Sobic010G041700--Sobic006G089300 Sobic010G041700--Sobic007G151100 Sobic002G374100 Sobic002G374100 Sobic010G041700--Sobic002G374100 Sobic009G066800 Sobic009G066800 Sobic010G041700--Sobic009G066800 Sobic010G041700--Sobic009G129000 Sobic001G483400 Sobic001G483400 Sobic010G041700--Sobic001G483400 Sobic002G272900 Sobic002G272900 Sobic010G041700--Sobic002G272900 Sobic004G187900 Sobic004G187900 Sobic009G023200--Sobic004G187900 Sobic009G023200--Sobic010G204600 Sobic009G023200--Sobic003G063200 Sobic001G067601 Sobic001G067601 Sobic009G023200--Sobic001G067601 Sobic009G023200--Sobic002G046100 Sobic009G023200--Sobic002G245800 Sobic003G181500 Sobic003G181500 Sobic009G023200--Sobic003G181500 Sobic003G202200 Sobic003G202200 Sobic009G023200--Sobic003G202200 Sobic005G196800 Sobic005G196800 Sobic009G023200--Sobic005G196800 Sobic002G405600 Sobic002G405600 Sobic002G245800--Sobic002G405600 Sobic001G040200 Sobic001G040200 Sobic002G245800--Sobic001G040200 Sobic003G324400 Sobic003G324400 Sobic002G245800--Sobic003G324400 Sobic009G247900 Sobic009G247900 Sobic002G245800--Sobic009G247900 Sobic001G422900 Sobic001G422900 Sobic002G245800--Sobic001G422900 Sobic002G245800--Sobic009G023200 Sobic001G095300 Sobic001G095300 Sobic002G245800--Sobic001G095300 Sobic002G140300 Sobic002G140300 Sobic002G245800--Sobic002G140300 Sobic006G179500 Sobic006G179500 Sobic002G245800--Sobic006G179500 Sobic010G178200--Sobic002G345300 Sobic010G178200--Sobic003G285800 Sobic003G350300 Sobic003G350300 Sobic010G178200--Sobic003G350300 Sobic010G041600 Sobic010G041600 Sobic010G178200--Sobic010G041600 Sobic001G034700 Sobic001G034700 Sobic010G178200--Sobic001G034700 Sobic001G281400 Sobic001G281400 Sobic010G178200--Sobic001G281400 Sobic010G178200--Sobic002G046100 Sobic010G274900 Sobic010G274900 Sobic010G178200--Sobic010G274900 Sobic007G087200 Sobic007G087200 Sobic010G178200--Sobic007G087200 Sobic001G516600 Sobic001G516600 Sobic007G151100--Sobic001G516600 Sobic003G158500 Sobic003G158500 Sobic007G151100--Sobic003G158500 Sobic007G151100--Sobic002G356101 Sobic001G538866 Sobic001G538866 Sobic007G151100--Sobic001G538866 Sobic007G151100--Sobic005G028700 Sobic007G151100--Sobic002G140300 Sobic002G245100 Sobic002G245100 Sobic007G151100--Sobic002G245100 Sobic001G513700 Sobic001G513700 Sobic007G151100--Sobic001G513700 Sobic002G036100 Sobic002G036100 Sobic007G151100--Sobic002G036100
Octagon: transcription factors


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