Gene annotation
Transcriptome id Sobic.004G186500.2,Sobic.004G186500.3
Synonym Sb04g023520
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
gibberellin receptor GID1L2, putative, expressed
UniProt C5XVK9
Pfam PF00135
Panther DB PTHR23024 PTHR23024:SF180
NCBI CDD KOG1515; Arylacetamide deacetylase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G47480 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os02g35940.1 : gibberellin receptor GID1L2, putative, expressed
MaizeGDB (Corn) Zm00025a031688 , Zm00025a020760 , Zm00025a056167
Brachypodium KQJ99979 , KQJ99981
Barley HORVU3Hr1G022640.3 , HORVU3Hr1G022640.2 , HORVU3Hr1G022640.1 , HORVU5Hr1G014130.2 , HORVU5Hr1G014130.1
Wheat TraesCS3A02G122000
Populus -


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cDNA sequences
Sobic.004G186500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G070200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@LTPL84 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
2 Sobic.001G399100 peroxisomal biogenesis factor 11, putative, expressed -
3 Sobic.001G536500 expressed protein -
4 Sobic.010G204600 SNF7 domain containing protein, putative, expressed K12197: CHMP1, VPS46, charged multivesicular body protein 1
5 Sobic.009G046600 stress-related protein, putative, expressed -
6 Sobic.005G109000 cytochrome P450, putative, expressed -
7 Sobic.003G063200 uncharacterized Cys-rich domain containing protein, putative, expressed -
8 Sobic.005G228900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
9 Sobic.005G028700 peflin, putative, expressed K13448: calcium-binding protein CML
10 Sobic.002G373001 - -
11 Sobic.004G145801 - K02978: RP-S27e, small subunit ribosomal protein S27e
12 Sobic.004G157000 protein kinase domain containing protein, expressed K13430: serine/threonine-protein kinase PBS1
13 Sobic.009G023200 glycine-rich protein A3, putative, expressed -
14 Sobic.010G267600 similar to Putative senescence-associated protein(PubMedID : 29862293)@senescence-associated protein, putative, expressed -
15 Sobic.007G151100 12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
16 Sobic.003G368500 Yip1 domain containing protein, expressed -
17 Sobic.002G245800 AN1-like zinc finger domain containing protein, expressed -
18 Sobic.010G041600 profilin domain containing protein, expressed K05759: profilin
19 Sobic.003G162700 expressed protein -
20 Sobic.005G196800 membrane protein, putative, expressed -


Gene co-expression network
sample Sobic004G186500 Sobic004G186500 Sobic002G070200 Sobic002G070200 Sobic004G186500--Sobic002G070200 Sobic001G399100 Sobic001G399100 Sobic004G186500--Sobic001G399100 Sobic001G536500 Sobic001G536500 Sobic004G186500--Sobic001G536500 Sobic010G204600 Sobic010G204600 Sobic004G186500--Sobic010G204600 Sobic009G046600 Sobic009G046600 Sobic004G186500--Sobic009G046600 Sobic005G109000 Sobic005G109000 Sobic004G186500--Sobic005G109000 Sobic003G063200 Sobic003G063200 Sobic004G186500--Sobic003G063200 Sobic005G228900 Sobic005G228900 Sobic004G186500--Sobic005G228900 Sobic005G028700 Sobic005G028700 Sobic004G186500--Sobic005G028700 Sobic002G070200--Sobic004G186500 Sobic003G162700 Sobic003G162700 Sobic002G070200--Sobic003G162700 Sobic002G373001 Sobic002G373001 Sobic002G070200--Sobic002G373001 Sobic002G333400 Sobic002G333400 Sobic002G070200--Sobic002G333400 Sobic001G407800 Sobic001G407800 Sobic002G070200--Sobic001G407800 Sobic008G044300 Sobic008G044300 Sobic002G070200--Sobic008G044300 Sobic001G192600 Sobic001G192600 Sobic002G070200--Sobic001G192600 Sobic001G449700 Sobic001G449700 Sobic002G070200--Sobic001G449700 Sobic005G186100 Sobic005G186100 Sobic002G070200--Sobic005G186100 Sobic009G033700 Sobic009G033700 Sobic001G399100--Sobic009G033700 Sobic001G399100--Sobic009G046600 Sobic010G107100 Sobic010G107100 Sobic001G399100--Sobic010G107100 Sobic001G399100--Sobic004G186500 Sobic003G019200 Sobic003G019200 Sobic001G399100--Sobic003G019200 Sobic009G200700 Sobic009G200700 Sobic001G399100--Sobic009G200700 Sobic001G399100--Sobic005G028700 Sobic005G229700 Sobic005G229700 Sobic001G399100--Sobic005G229700 Sobic010G086200 Sobic010G086200 Sobic001G399100--Sobic010G086200 Sobic001G536500--Sobic010G204600 Sobic001G536500--Sobic003G063200 Sobic001G536500--Sobic004G186500 Sobic001G445800 Sobic001G445800 Sobic001G536500--Sobic001G445800 Sobic001G019900 Sobic001G019900 Sobic001G536500--Sobic001G019900 Sobic009G131100 Sobic009G131100 Sobic001G536500--Sobic009G131100 Sobic001G390300 Sobic001G390300 Sobic001G536500--Sobic001G390300 Sobic001G037000 Sobic001G037000 Sobic001G536500--Sobic001G037000 Sobic010G054200 Sobic010G054200 Sobic001G536500--Sobic010G054200 Sobic001G095300 Sobic001G095300 Sobic010G204600--Sobic001G095300 Sobic010G204600--Sobic003G063200 Sobic002G405600 Sobic002G405600 Sobic010G204600--Sobic002G405600 Sobic004G157000 Sobic004G157000 Sobic010G204600--Sobic004G157000 Sobic009G023200 Sobic009G023200 Sobic010G204600--Sobic009G023200 Sobic009G129000 Sobic009G129000 Sobic010G204600--Sobic009G129000 Sobic001G055600 Sobic001G055600 Sobic010G204600--Sobic001G055600 Sobic003G202200 Sobic003G202200 Sobic010G204600--Sobic003G202200 Sobic010G204600--Sobic009G033700 Sobic009G046600--Sobic004G157000 Sobic009G046600--Sobic005G028700 Sobic009G046600--Sobic009G129000 Sobic009G046600--Sobic001G399100 Sobic010G041700 Sobic010G041700 Sobic009G046600--Sobic010G041700 Sobic009G046600--Sobic009G023200 Sobic002G245800 Sobic002G245800 Sobic009G046600--Sobic002G245800 Sobic010G178200 Sobic010G178200 Sobic009G046600--Sobic010G178200 Sobic007G151100 Sobic007G151100 Sobic009G046600--Sobic007G151100 Sobic010G209100 Sobic010G209100 Sobic005G109000--Sobic010G209100 Sobic002G214800 Sobic002G214800 Sobic005G109000--Sobic002G214800 Sobic002G202100 Sobic002G202100 Sobic005G109000--Sobic002G202100 Sobic005G109000--Sobic007G151100 Sobic005G109000--Sobic002G245800 Sobic010G267600 Sobic010G267600 Sobic005G109000--Sobic010G267600 Sobic001G259600 Sobic001G259600 Sobic005G109000--Sobic001G259600 Sobic010G083600 Sobic010G083600 Sobic005G109000--Sobic010G083600 Sobic005G109000--Sobic001G449700 Sobic003G063200--Sobic005G028700 Sobic003G063200--Sobic010G204600 Sobic004G247200 Sobic004G247200 Sobic003G063200--Sobic004G247200 Sobic003G063200--Sobic001G055600 Sobic003G063200--Sobic001G037000 Sobic003G063200--Sobic009G023200 Sobic003G063200--Sobic001G390300 Sobic004G306300 Sobic004G306300 Sobic003G063200--Sobic004G306300 Sobic002G407900 Sobic002G407900 Sobic003G063200--Sobic002G407900 Sobic005G228900--Sobic007G151100 Sobic002G356101 Sobic002G356101 Sobic005G228900--Sobic002G356101 Sobic005G228900--Sobic004G247200 Sobic005G228900--Sobic005G028700 Sobic005G228900--Sobic001G399100 Sobic001G538866 Sobic001G538866 Sobic005G228900--Sobic001G538866 Sobic005G228900--Sobic003G063200 Sobic005G228900--Sobic009G033700 Sobic001G464900 Sobic001G464900 Sobic005G228900--Sobic001G464900 Sobic005G028700--Sobic003G063200 Sobic005G028700--Sobic009G129000 Sobic005G028700--Sobic010G086200 Sobic004G065500 Sobic004G065500 Sobic005G028700--Sobic004G065500 Sobic005G028700--Sobic004G247200 Sobic005G028700--Sobic007G151100 Sobic005G028700--Sobic002G356101 Sobic001G477300 Sobic001G477300 Sobic005G028700--Sobic001G477300 Sobic005G028700--Sobic004G306300
Octagon: transcription factors


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