Gene annotation
Transcriptome id Sobic.002G070200.1
Synonym Sb02g005900
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
LTPL84 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
UniProt C5XCL8
Pfam PF14368
Panther DB PTHR33044 PTHR33044:SF30
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G44290 : Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
RAP-DB (Rice) LOC_Os07g09970.1 : LTPL84 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
MaizeGDB (Corn) Zm00025a008626 , Zm00025a045314
Brachypodium KQK20448
Barley -
Wheat TraesCS4A02G021300 , TraesCS6A02G260600 , TraesCS4D02G280900 , TraesCS6D02G241400
Populus -


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cDNA sequences
Sobic.002G070200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G186500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@gibberellin receptor GID1L2, putative, expressed -
2 Sobic.003G162700 expressed protein -
3 Sobic.002G373001 - -
4 Sobic.002G333400 KI domain interacting kinase 1, putative, expressed -
5 Sobic.001G407800 leucoanthocyanidin dioxygenase, putative, expressed -
6 Sobic.008G044300 U-box domain-containing protein, putative, expressed -
7 Sobic.001G192600 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed K17794: mitochondrial import inner membrane translocase subunit TIM23
8 Sobic.001G449700 highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@cytochrome P450, putative, expressed K01723: hydroperoxide dehydratase
9 Sobic.005G186100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@patatin, putative, expressed -
10 Sobic.005G109000 cytochrome P450, putative, expressed -
11 Sobic.006G056400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@zinc-finger protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
12 Sobic.003G364600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyl hydrolases family 17, putative, expressed -
13 Sobic.004G010300 glycerol-3-phosphate acyltransferase, putative, expressed K13508: glycerol-3-phosphate acyltransferase
14 Sobic.001G536500 expressed protein -
15 Sobic.001G067601 - K17553: protein phosphatase 1 regulatory subunit 11
16 Sobic.010G217900 diphthamide biosynthesis protein 3, putative, expressed K15455: DPH3, diphthamide biosynthesis protein 3
17 Sobic.003G277500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@methyltransferase, putative, expressed -
18 Sobic.003G202200 uncharacterized protein PA4923, putative, expressed K06966: pyrimidine/purine-5'-nucleotide nucleosidase
19 Sobic.010G166500 amino acid transporter, putative, expressed -
20 Sobic.010G274900 serine/threonine-protein kinase Cx32, chloroplast precursor, putative, expressed -


Gene co-expression network
sample Sobic002G070200 Sobic002G070200 Sobic004G186500 Sobic004G186500 Sobic002G070200--Sobic004G186500 Sobic003G162700 Sobic003G162700 Sobic002G070200--Sobic003G162700 Sobic002G373001 Sobic002G373001 Sobic002G070200--Sobic002G373001 Sobic002G333400 Sobic002G333400 Sobic002G070200--Sobic002G333400 Sobic001G407800 Sobic001G407800 Sobic002G070200--Sobic001G407800 Sobic008G044300 Sobic008G044300 Sobic002G070200--Sobic008G044300 Sobic001G192600 Sobic001G192600 Sobic002G070200--Sobic001G192600 Sobic001G449700 Sobic001G449700 Sobic002G070200--Sobic001G449700 Sobic005G186100 Sobic005G186100 Sobic002G070200--Sobic005G186100 Sobic004G186500--Sobic002G070200 Sobic001G399100 Sobic001G399100 Sobic004G186500--Sobic001G399100 Sobic001G536500 Sobic001G536500 Sobic004G186500--Sobic001G536500 Sobic010G204600 Sobic010G204600 Sobic004G186500--Sobic010G204600 Sobic009G046600 Sobic009G046600 Sobic004G186500--Sobic009G046600 Sobic005G109000 Sobic005G109000 Sobic004G186500--Sobic005G109000 Sobic003G063200 Sobic003G063200 Sobic004G186500--Sobic003G063200 Sobic005G228900 Sobic005G228900 Sobic004G186500--Sobic005G228900 Sobic005G028700 Sobic005G028700 Sobic004G186500--Sobic005G028700 Sobic001G067601 Sobic001G067601 Sobic003G162700--Sobic001G067601 Sobic009G070400 Sobic009G070400 Sobic003G162700--Sobic009G070400 Sobic003G162700--Sobic002G333400 Sobic006G158600 Sobic006G158600 Sobic003G162700--Sobic006G158600 Sobic003G334600 Sobic003G334600 Sobic003G162700--Sobic003G334600 Sobic010G238600 Sobic010G238600 Sobic003G162700--Sobic010G238600 Sobic010G274900 Sobic010G274900 Sobic003G162700--Sobic010G274900 Sobic007G025500 Sobic007G025500 Sobic003G162700--Sobic007G025500 Sobic008G136400 Sobic008G136400 Sobic003G162700--Sobic008G136400 Sobic002G373001--Sobic001G449700 Sobic002G034500 Sobic002G034500 Sobic002G373001--Sobic002G034500 Sobic003G021500 Sobic003G021500 Sobic002G373001--Sobic003G021500 Sobic002G319500 Sobic002G319500 Sobic002G373001--Sobic002G319500 Sobic003G102200 Sobic003G102200 Sobic002G373001--Sobic003G102200 Sobic002G373001--Sobic002G070200 Sobic002G082600 Sobic002G082600 Sobic002G373001--Sobic002G082600 Sobic002G373001--Sobic002G333400 Sobic004G095600 Sobic004G095600 Sobic002G373001--Sobic004G095600 Sobic002G333400--Sobic001G407800 Sobic002G333400--Sobic006G158600 Sobic006G056400 Sobic006G056400 Sobic002G333400--Sobic006G056400 Sobic002G333400--Sobic008G136400 Sobic002G333400--Sobic005G186100 Sobic003G369100 Sobic003G369100 Sobic002G333400--Sobic003G369100 Sobic009G151600 Sobic009G151600 Sobic002G333400--Sobic009G151600 Sobic002G140400 Sobic002G140400 Sobic002G333400--Sobic002G140400 Sobic007G074000 Sobic007G074000 Sobic002G333400--Sobic007G074000 Sobic001G407800--Sobic002G333400 Sobic009G036100 Sobic009G036100 Sobic001G407800--Sobic009G036100 Sobic001G407800--Sobic006G056400 Sobic004G237800 Sobic004G237800 Sobic001G407800--Sobic004G237800 Sobic001G407800--Sobic007G074000 Sobic001G407800--Sobic005G186100 Sobic010G259300 Sobic010G259300 Sobic001G407800--Sobic010G259300 Sobic001G407800--Sobic003G369100 Sobic008G139600 Sobic008G139600 Sobic001G407800--Sobic008G139600 Sobic001G310600 Sobic001G310600 Sobic008G044300--Sobic001G310600 Sobic003G041600 Sobic003G041600 Sobic008G044300--Sobic003G041600 Sobic009G221400 Sobic009G221400 Sobic008G044300--Sobic009G221400 Sobic001G112200 Sobic001G112200 Sobic008G044300--Sobic001G112200 Sobic003G364600 Sobic003G364600 Sobic008G044300--Sobic003G364600 Sobic008G044300--Sobic005G186100 Sobic001G279500 Sobic001G279500 Sobic008G044300--Sobic001G279500 Sobic010G225251 Sobic010G225251 Sobic008G044300--Sobic010G225251 Sobic002G338500 Sobic002G338500 Sobic008G044300--Sobic002G338500 Sobic002G192000 Sobic002G192000 Sobic001G192600--Sobic002G192000 Sobic001G367600 Sobic001G367600 Sobic001G192600--Sobic001G367600 Sobic001G038900 Sobic001G038900 Sobic001G192600--Sobic001G038900 Sobic001G192600--Sobic006G158600 Sobic001G423800 Sobic001G423800 Sobic001G192600--Sobic001G423800 Sobic001G055600 Sobic001G055600 Sobic001G192600--Sobic001G055600 Sobic001G481100 Sobic001G481100 Sobic001G192600--Sobic001G481100 Sobic001G192600--Sobic009G221400 Sobic002G353900 Sobic002G353900 Sobic001G192600--Sobic002G353900 Sobic001G383700 Sobic001G383700 Sobic001G449700--Sobic001G383700 Sobic003G202200 Sobic003G202200 Sobic001G449700--Sobic003G202200 Sobic003G110200 Sobic003G110200 Sobic001G449700--Sobic003G110200 Sobic007G149300 Sobic007G149300 Sobic001G449700--Sobic007G149300 Sobic001G449700--Sobic003G021500 Sobic009G036000 Sobic009G036000 Sobic001G449700--Sobic009G036000 Sobic001G449700--Sobic002G333400 Sobic001G259700 Sobic001G259700 Sobic001G449700--Sobic001G259700 Sobic001G449700--Sobic005G186100 Sobic001G138600 Sobic001G138600 Sobic005G186100--Sobic001G138600 Sobic005G186100--Sobic001G112200 Sobic005G186100--Sobic006G056400 Sobic005G186100--Sobic002G333400 Sobic001G318700 Sobic001G318700 Sobic005G186100--Sobic001G318700 Sobic003G228900 Sobic003G228900 Sobic005G186100--Sobic003G228900 Sobic005G186100--Sobic001G481100 Sobic001G079300 Sobic001G079300 Sobic005G186100--Sobic001G079300 Sobic009G184000 Sobic009G184000 Sobic005G186100--Sobic009G184000
Octagon: transcription factors


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