Gene annotation
Transcriptome id Sobic.003G277500.1
Synonym Sb03g032930
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
methyltransferase, putative, expressed
UniProt C5XIB2
Pfam PF08241
Panther DB PTHR10108 PTHR10108:SF898
NCBI CDD KOG3010; Methyltransferase
KEGG Orthology -
Gene Ontology GO:0008168; methyltransferase activity GO:0008152metabolic process


Orthologs (automatic annotation)
TAIR AT5G10830 : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
RAP-DB (Rice) LOC_Os01g51870.1 : methyltransferase, putative, expressed
MaizeGDB (Corn) Zm00025a038973 , Zm00025a027782
Brachypodium KQK09482
Barley HORVU3Hr1G067760.3 , HORVU3Hr1G067760.2 , HORVU3Hr1G067760.1
Wheat TraesCS3B02G275600 , TraesCS3B02G275600 , TraesCS3D02G247000 , TraesCS3A02G244400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G044932 - -
2 Sobic.004G010300 glycerol-3-phosphate acyltransferase, putative, expressed K13508: glycerol-3-phosphate acyltransferase
3 Sobic.003G162700 expressed protein -
4 Sobic.002G070200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@LTPL84 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
5 Sobic.002G407700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@sex determination protein tasselseed-2, putative, expressed -
6 Sobic.009G232266 - -
7 Sobic.002G373001 - -
8 Sobic.002G333300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine/threonine-protein kinase receptor precursor, putative, expressed -
9 Sobic.004G195000 heavy metal transport/detoxification protein, putative, expressed -
10 Sobic.003G296300 WRKY13, expressed -
11 Sobic.005G228000 SNF7 domain containing protein, putative, expressed K12191: charged multivesicular body protein 2A
12 Sobic.005G109000 cytochrome P450, putative, expressed -
13 Sobic.006G192500 CAMK_CAMK_like.27 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
14 Sobic.010G217900 diphthamide biosynthesis protein 3, putative, expressed K15455: DPH3, diphthamide biosynthesis protein 3
15 Sobic.004G297100 Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor, putative, expressed K09286: EREBP-like factor
16 Sobic.001G234300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@zinc finger, RING-type, putative, expressed -
17 Sobic.006G246100 one cut domain family member 3, putative, expressed -
18 Sobic.004G186500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@gibberellin receptor GID1L2, putative, expressed -
19 Sobic.006G138500 wall-associated receptor kinase-like 20 precursor, putative, expressed K04733: interleukin-1 receptor-associated kinase 4
20 Sobic.010G194900 bZIP transcription factor domain containing protein, expressed -


Gene co-expression network
sample Sobic003G277500 Sobic003G277500 Sobic006G044932 Sobic006G044932 Sobic003G277500--Sobic006G044932 Sobic004G010300 Sobic004G010300 Sobic003G277500--Sobic004G010300 Sobic003G162700 Sobic003G162700 Sobic003G277500--Sobic003G162700 Sobic002G070200 Sobic002G070200 Sobic003G277500--Sobic002G070200 Sobic002G407700 Sobic002G407700 Sobic003G277500--Sobic002G407700 Sobic009G232266 Sobic009G232266 Sobic003G277500--Sobic009G232266 Sobic002G373001 Sobic002G373001 Sobic003G277500--Sobic002G373001 Sobic002G333300 Sobic002G333300 Sobic003G277500--Sobic002G333300 Sobic004G195000 Sobic004G195000 Sobic003G277500--Sobic004G195000 Sobic006G044932--Sobic003G277500 Sobic001G343900 Sobic001G343900 Sobic006G044932--Sobic001G343900 Sobic006G044932--Sobic002G407700 Sobic006G044932--Sobic004G010300 Sobic005G228000 Sobic005G228000 Sobic006G044932--Sobic005G228000 Sobic006G044932--Sobic002G373001 Sobic007G196600 Sobic007G196600 Sobic006G044932--Sobic007G196600 Sobic006G138500 Sobic006G138500 Sobic006G044932--Sobic006G138500 Sobic006G044932--Sobic002G333300 Sobic004G010300--Sobic003G277500 Sobic001G536500 Sobic001G536500 Sobic004G010300--Sobic001G536500 Sobic009G065300 Sobic009G065300 Sobic004G010300--Sobic009G065300 Sobic004G010300--Sobic002G070200 Sobic004G186500 Sobic004G186500 Sobic004G010300--Sobic004G186500 Sobic004G010300--Sobic003G162700 Sobic009G230100 Sobic009G230100 Sobic004G010300--Sobic009G230100 Sobic004G010300--Sobic006G044932 Sobic010G194300 Sobic010G194300 Sobic004G010300--Sobic010G194300 Sobic001G067601 Sobic001G067601 Sobic003G162700--Sobic001G067601 Sobic009G070400 Sobic009G070400 Sobic003G162700--Sobic009G070400 Sobic002G333400 Sobic002G333400 Sobic003G162700--Sobic002G333400 Sobic006G158600 Sobic006G158600 Sobic003G162700--Sobic006G158600 Sobic003G334600 Sobic003G334600 Sobic003G162700--Sobic003G334600 Sobic010G238600 Sobic010G238600 Sobic003G162700--Sobic010G238600 Sobic010G274900 Sobic010G274900 Sobic003G162700--Sobic010G274900 Sobic007G025500 Sobic007G025500 Sobic003G162700--Sobic007G025500 Sobic008G136400 Sobic008G136400 Sobic003G162700--Sobic008G136400 Sobic002G070200--Sobic004G186500 Sobic002G070200--Sobic003G162700 Sobic002G070200--Sobic002G373001 Sobic002G070200--Sobic002G333400 Sobic001G407800 Sobic001G407800 Sobic002G070200--Sobic001G407800 Sobic008G044300 Sobic008G044300 Sobic002G070200--Sobic008G044300 Sobic001G192600 Sobic001G192600 Sobic002G070200--Sobic001G192600 Sobic001G449700 Sobic001G449700 Sobic002G070200--Sobic001G449700 Sobic005G186100 Sobic005G186100 Sobic002G070200--Sobic005G186100 Sobic002G407700--Sobic006G044932 Sobic002G057600 Sobic002G057600 Sobic002G407700--Sobic002G057600 Sobic002G407700--Sobic001G343900 Sobic002G407700--Sobic003G277500 Sobic002G407700--Sobic004G195000 Sobic002G407700--Sobic009G232266 Sobic003G296300 Sobic003G296300 Sobic002G407700--Sobic003G296300 Sobic001G345400 Sobic001G345400 Sobic002G407700--Sobic001G345400 Sobic002G407700--Sobic005G228000 Sobic001G357500 Sobic001G357500 Sobic009G232266--Sobic001G357500 Sobic009G236800 Sobic009G236800 Sobic009G232266--Sobic009G236800 Sobic009G232266--Sobic003G277500 Sobic003G271201 Sobic003G271201 Sobic009G232266--Sobic003G271201 Sobic008G113000 Sobic008G113000 Sobic009G232266--Sobic008G113000 Sobic003G041600 Sobic003G041600 Sobic009G232266--Sobic003G041600 Sobic005G155600 Sobic005G155600 Sobic009G232266--Sobic005G155600 Sobic009G232266--Sobic004G010300 Sobic010G178200 Sobic010G178200 Sobic009G232266--Sobic010G178200 Sobic002G373001--Sobic001G449700 Sobic002G034500 Sobic002G034500 Sobic002G373001--Sobic002G034500 Sobic003G021500 Sobic003G021500 Sobic002G373001--Sobic003G021500 Sobic002G319500 Sobic002G319500 Sobic002G373001--Sobic002G319500 Sobic003G102200 Sobic003G102200 Sobic002G373001--Sobic003G102200 Sobic002G373001--Sobic002G070200 Sobic002G082600 Sobic002G082600 Sobic002G373001--Sobic002G082600 Sobic002G373001--Sobic002G333400 Sobic004G095600 Sobic004G095600 Sobic002G373001--Sobic004G095600 Sobic005G039100 Sobic005G039100 Sobic002G333300--Sobic005G039100 Sobic010G220200 Sobic010G220200 Sobic002G333300--Sobic010G220200 Sobic006G190500 Sobic006G190500 Sobic002G333300--Sobic006G190500 Sobic001G483400 Sobic001G483400 Sobic002G333300--Sobic001G483400 Sobic002G374100 Sobic002G374100 Sobic002G333300--Sobic002G374100 Sobic010G217800 Sobic010G217800 Sobic002G333300--Sobic010G217800 Sobic006G230500 Sobic006G230500 Sobic002G333300--Sobic006G230500 Sobic002G261100 Sobic002G261100 Sobic002G333300--Sobic002G261100 Sobic005G010200 Sobic005G010200 Sobic002G333300--Sobic005G010200 Sobic001G319200 Sobic001G319200 Sobic004G195000--Sobic001G319200 Sobic006G246100 Sobic006G246100 Sobic004G195000--Sobic006G246100 Sobic004G195000--Sobic003G277500 Sobic005G080200 Sobic005G080200 Sobic004G195000--Sobic005G080200 Sobic004G195000--Sobic003G296300 Sobic004G195000--Sobic002G407700 Sobic001G403300 Sobic001G403300 Sobic004G195000--Sobic001G403300 Sobic002G377100 Sobic002G377100 Sobic004G195000--Sobic002G377100 Sobic004G195000--Sobic005G155600
Octagon: transcription factors


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