Gene annotation
Transcriptome id Sobic.006G044932.1
Synonym -
Functional annotation -
UniProt A0A1Z5RC68
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G277500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@methyltransferase, putative, expressed -
2 Sobic.001G343900 tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@ZIM domain containing protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
3 Sobic.002G407700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@sex determination protein tasselseed-2, putative, expressed -
4 Sobic.004G010300 glycerol-3-phosphate acyltransferase, putative, expressed K13508: glycerol-3-phosphate acyltransferase
5 Sobic.005G228000 SNF7 domain containing protein, putative, expressed K12191: charged multivesicular body protein 2A
6 Sobic.002G373001 - -
7 Sobic.007G196600 proteophosphoglycan ppg4, putative, expressed K13456: RPM1-interacting protein 4
8 Sobic.006G138500 wall-associated receptor kinase-like 20 precursor, putative, expressed K04733: interleukin-1 receptor-associated kinase 4
9 Sobic.002G333300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine/threonine-protein kinase receptor precursor, putative, expressed -
10 Sobic.009G046600 stress-related protein, putative, expressed -
11 Sobic.004G186500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@gibberellin receptor GID1L2, putative, expressed -
12 Sobic.002G245800 AN1-like zinc finger domain containing protein, expressed -
13 Sobic.001G234300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@zinc finger, RING-type, putative, expressed -
14 Sobic.010G052600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
15 Sobic.005G109000 cytochrome P450, putative, expressed -
16 Sobic.010G194900 bZIP transcription factor domain containing protein, expressed -
17 Sobic.001G410100 CGMC_MAPKCGMC_2_ERK.2 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
18 Sobic.001G285000 - -
19 Sobic.001G321500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsFBX391 - F-box domain containing protein, expressed -
20 Sobic.010G047400 "HGW(Ortholog in rice:Li et al., 2012)"(PubMedID : 31659929)@proline-rich cell wall protein-like, putative, expressed -


Gene co-expression network
sample Sobic006G044932 Sobic006G044932 Sobic003G277500 Sobic003G277500 Sobic006G044932--Sobic003G277500 Sobic001G343900 Sobic001G343900 Sobic006G044932--Sobic001G343900 Sobic002G407700 Sobic002G407700 Sobic006G044932--Sobic002G407700 Sobic004G010300 Sobic004G010300 Sobic006G044932--Sobic004G010300 Sobic005G228000 Sobic005G228000 Sobic006G044932--Sobic005G228000 Sobic002G373001 Sobic002G373001 Sobic006G044932--Sobic002G373001 Sobic007G196600 Sobic007G196600 Sobic006G044932--Sobic007G196600 Sobic006G138500 Sobic006G138500 Sobic006G044932--Sobic006G138500 Sobic002G333300 Sobic002G333300 Sobic006G044932--Sobic002G333300 Sobic003G277500--Sobic006G044932 Sobic003G277500--Sobic004G010300 Sobic003G162700 Sobic003G162700 Sobic003G277500--Sobic003G162700 Sobic002G070200 Sobic002G070200 Sobic003G277500--Sobic002G070200 Sobic003G277500--Sobic002G407700 Sobic009G232266 Sobic009G232266 Sobic003G277500--Sobic009G232266 Sobic003G277500--Sobic002G373001 Sobic003G277500--Sobic002G333300 Sobic004G195000 Sobic004G195000 Sobic003G277500--Sobic004G195000 Sobic001G343900--Sobic006G044932 Sobic001G343900--Sobic002G407700 Sobic001G343900--Sobic007G196600 Sobic007G044300 Sobic007G044300 Sobic001G343900--Sobic007G044300 Sobic001G343900--Sobic005G228000 Sobic004G186500 Sobic004G186500 Sobic001G343900--Sobic004G186500 Sobic001G410100 Sobic001G410100 Sobic001G343900--Sobic001G410100 Sobic007G195701 Sobic007G195701 Sobic001G343900--Sobic007G195701 Sobic002G222800 Sobic002G222800 Sobic001G343900--Sobic002G222800 Sobic002G407700--Sobic006G044932 Sobic002G057600 Sobic002G057600 Sobic002G407700--Sobic002G057600 Sobic002G407700--Sobic001G343900 Sobic002G407700--Sobic003G277500 Sobic002G407700--Sobic004G195000 Sobic002G407700--Sobic009G232266 Sobic003G296300 Sobic003G296300 Sobic002G407700--Sobic003G296300 Sobic001G345400 Sobic001G345400 Sobic002G407700--Sobic001G345400 Sobic002G407700--Sobic005G228000 Sobic004G010300--Sobic003G277500 Sobic001G536500 Sobic001G536500 Sobic004G010300--Sobic001G536500 Sobic009G065300 Sobic009G065300 Sobic004G010300--Sobic009G065300 Sobic004G010300--Sobic002G070200 Sobic004G010300--Sobic004G186500 Sobic004G010300--Sobic003G162700 Sobic009G230100 Sobic009G230100 Sobic004G010300--Sobic009G230100 Sobic004G010300--Sobic006G044932 Sobic010G194300 Sobic010G194300 Sobic004G010300--Sobic010G194300 Sobic001G019900 Sobic001G019900 Sobic005G228000--Sobic001G019900 Sobic002G212200 Sobic002G212200 Sobic005G228000--Sobic002G212200 Sobic001G067601 Sobic001G067601 Sobic005G228000--Sobic001G067601 Sobic002G345300 Sobic002G345300 Sobic005G228000--Sobic002G345300 Sobic009G023200 Sobic009G023200 Sobic005G228000--Sobic009G023200 Sobic004G157000 Sobic004G157000 Sobic005G228000--Sobic004G157000 Sobic003G350300 Sobic003G350300 Sobic005G228000--Sobic003G350300 Sobic009G094450 Sobic009G094450 Sobic005G228000--Sobic009G094450 Sobic010G047400 Sobic010G047400 Sobic005G228000--Sobic010G047400 Sobic001G449700 Sobic001G449700 Sobic002G373001--Sobic001G449700 Sobic002G034500 Sobic002G034500 Sobic002G373001--Sobic002G034500 Sobic003G021500 Sobic003G021500 Sobic002G373001--Sobic003G021500 Sobic002G319500 Sobic002G319500 Sobic002G373001--Sobic002G319500 Sobic003G102200 Sobic003G102200 Sobic002G373001--Sobic003G102200 Sobic002G373001--Sobic002G070200 Sobic002G082600 Sobic002G082600 Sobic002G373001--Sobic002G082600 Sobic002G333400 Sobic002G333400 Sobic002G373001--Sobic002G333400 Sobic004G095600 Sobic004G095600 Sobic002G373001--Sobic004G095600 Sobic002G118600 Sobic002G118600 Sobic007G196600--Sobic002G118600 Sobic007G196600--Sobic001G343900 Sobic003G352400 Sobic003G352400 Sobic007G196600--Sobic003G352400 Sobic007G196600--Sobic007G044300 Sobic007G196600--Sobic006G044932 Sobic001G314700 Sobic001G314700 Sobic007G196600--Sobic001G314700 Sobic007G196600--Sobic001G410100 Sobic009G046600 Sobic009G046600 Sobic007G196600--Sobic009G046600 Sobic007G196600--Sobic002G222800 Sobic006G138500--Sobic006G044932 Sobic006G138500--Sobic003G277500 Sobic001G321500 Sobic001G321500 Sobic006G138500--Sobic001G321500 Sobic006G138500--Sobic003G296300 Sobic006G138500--Sobic001G410100 Sobic006G138500--Sobic003G352400 Sobic001G287600 Sobic001G287600 Sobic006G138500--Sobic001G287600 Sobic001G285000 Sobic001G285000 Sobic006G138500--Sobic001G285000 Sobic010G052600 Sobic010G052600 Sobic006G138500--Sobic010G052600 Sobic005G039100 Sobic005G039100 Sobic002G333300--Sobic005G039100 Sobic010G220200 Sobic010G220200 Sobic002G333300--Sobic010G220200 Sobic006G190500 Sobic006G190500 Sobic002G333300--Sobic006G190500 Sobic001G483400 Sobic001G483400 Sobic002G333300--Sobic001G483400 Sobic002G374100 Sobic002G374100 Sobic002G333300--Sobic002G374100 Sobic010G217800 Sobic010G217800 Sobic002G333300--Sobic010G217800 Sobic006G230500 Sobic006G230500 Sobic002G333300--Sobic006G230500 Sobic002G261100 Sobic002G261100 Sobic002G333300--Sobic002G261100 Sobic005G010200 Sobic005G010200 Sobic002G333300--Sobic005G010200
Octagon: transcription factors


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