Gene annotation
Transcriptome id Sobic.004G010300.1
Synonym GPAT6, Sb04g001060, ATGPAT6
Functional annotation glycerol-3-phosphate acyltransferase, putative, expressed
UniProt C5XS88
Pfam PF01553
Panther DB PTHR15486 PTHR15486:SF27
NCBI CDD -
KEGG Orthology K13508; glycerol-3-phosphate acyltransferase
Gene Ontology GO:0016746; transferase activity, transferring acyl groups GO:0008152metabolic process


Orthologs (automatic annotation)
TAIR AT1G01610 : glycerol-3-phosphate acyltransferase 4
RAP-DB (Rice) LOC_Os02g02340.1 : glycerol-3-phosphate acyltransferase, putative, expressed
MaizeGDB (Corn) Zm00025a018693 , Zm00025a023934 , Zm00025a000815 , Zm00025a006953
Brachypodium KQJ92881
Barley HORVU4Hr1G074470.1 , HORVU4Hr1G074470.2 , HORVU4Hr1G074470.4 , HORVU4Hr1G074470.6 , HORVU4Hr1G074470.7 , HORVU6Hr1G006810.5 , HORVU6Hr1G006810.4 , HORVU6Hr1G006810.7 , HORVU6Hr1G006810.6 , HORVU6Hr1G006810.1 , HORVU6Hr1G006810.3 , HORVU1Hr1G073340.2 , HORVU1Hr1G073340.3 , HORVU1Hr1G073340.1
Wheat TraesCS4D02G280800 , TraesCS4A02G021500 , TraesCS6B02G051800 , TraesCS1A02G278700 , TraesCS6B02G052300 , TraesCS4B02G282100 , TraesCS6D02G043000 , TraesCS6A02G037400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G277500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@methyltransferase, putative, expressed -
2 Sobic.001G536500 expressed protein -
3 Sobic.009G065300 expressed protein -
4 Sobic.002G070200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@LTPL84 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
5 Sobic.004G186500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@gibberellin receptor GID1L2, putative, expressed -
6 Sobic.003G162700 expressed protein -
7 Sobic.009G230100 expressed protein -
8 Sobic.006G044932 - -
9 Sobic.010G194300 VQ domain containing protein, putative, expressed -
10 Sobic.006G246100 one cut domain family member 3, putative, expressed -
11 Sobic.005G228000 SNF7 domain containing protein, putative, expressed K12191: charged multivesicular body protein 2A
12 Sobic.004G351500 - -
13 Sobic.001G234800 inorganic phosphate transporter, putative, expressed K08176: MFS transporter, PHS family, inorganic phosphate transporter
14 Sobic.001G432000 LYR motif containing protein, putative, expressed -
15 Sobic.010G268400 eukaryotic aspartyl protease domain containing protein, expressed -
16 Sobic.005G080200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Ser/Thr protein phosphatase family protein, putative, expressed -
17 Sobic.010G194900 bZIP transcription factor domain containing protein, expressed -
18 Sobic.003G417350 - -
19 Sobic.008G185400 ras-related protein, putative, expressed K07889: Ras-related protein Rab-5C
20 Sobic.001G034700 actin-depolymerizing factor, putative, expressed K05765: cofilin


Gene co-expression network
sample Sobic004G010300 Sobic004G010300 Sobic003G277500 Sobic003G277500 Sobic004G010300--Sobic003G277500 Sobic001G536500 Sobic001G536500 Sobic004G010300--Sobic001G536500 Sobic009G065300 Sobic009G065300 Sobic004G010300--Sobic009G065300 Sobic002G070200 Sobic002G070200 Sobic004G010300--Sobic002G070200 Sobic004G186500 Sobic004G186500 Sobic004G010300--Sobic004G186500 Sobic003G162700 Sobic003G162700 Sobic004G010300--Sobic003G162700 Sobic009G230100 Sobic009G230100 Sobic004G010300--Sobic009G230100 Sobic006G044932 Sobic006G044932 Sobic004G010300--Sobic006G044932 Sobic010G194300 Sobic010G194300 Sobic004G010300--Sobic010G194300 Sobic003G277500--Sobic006G044932 Sobic003G277500--Sobic004G010300 Sobic003G277500--Sobic003G162700 Sobic003G277500--Sobic002G070200 Sobic002G407700 Sobic002G407700 Sobic003G277500--Sobic002G407700 Sobic009G232266 Sobic009G232266 Sobic003G277500--Sobic009G232266 Sobic002G373001 Sobic002G373001 Sobic003G277500--Sobic002G373001 Sobic002G333300 Sobic002G333300 Sobic003G277500--Sobic002G333300 Sobic004G195000 Sobic004G195000 Sobic003G277500--Sobic004G195000 Sobic010G204600 Sobic010G204600 Sobic001G536500--Sobic010G204600 Sobic003G063200 Sobic003G063200 Sobic001G536500--Sobic003G063200 Sobic001G536500--Sobic004G186500 Sobic001G445800 Sobic001G445800 Sobic001G536500--Sobic001G445800 Sobic001G019900 Sobic001G019900 Sobic001G536500--Sobic001G019900 Sobic009G131100 Sobic009G131100 Sobic001G536500--Sobic009G131100 Sobic001G390300 Sobic001G390300 Sobic001G536500--Sobic001G390300 Sobic001G037000 Sobic001G037000 Sobic001G536500--Sobic001G037000 Sobic010G054200 Sobic010G054200 Sobic001G536500--Sobic010G054200 Sobic002G327300 Sobic002G327300 Sobic009G065300--Sobic002G327300 Sobic001G234800 Sobic001G234800 Sobic009G065300--Sobic001G234800 Sobic002G327100 Sobic002G327100 Sobic009G065300--Sobic002G327100 Sobic003G228200 Sobic003G228200 Sobic009G065300--Sobic003G228200 Sobic003G416300 Sobic003G416300 Sobic009G065300--Sobic003G416300 Sobic003G037500 Sobic003G037500 Sobic009G065300--Sobic003G037500 Sobic007G127100 Sobic007G127100 Sobic009G065300--Sobic007G127100 Sobic001G318500 Sobic001G318500 Sobic009G065300--Sobic001G318500 Sobic002G302500 Sobic002G302500 Sobic009G065300--Sobic002G302500 Sobic002G070200--Sobic004G186500 Sobic002G070200--Sobic003G162700 Sobic002G070200--Sobic002G373001 Sobic002G333400 Sobic002G333400 Sobic002G070200--Sobic002G333400 Sobic001G407800 Sobic001G407800 Sobic002G070200--Sobic001G407800 Sobic008G044300 Sobic008G044300 Sobic002G070200--Sobic008G044300 Sobic001G192600 Sobic001G192600 Sobic002G070200--Sobic001G192600 Sobic001G449700 Sobic001G449700 Sobic002G070200--Sobic001G449700 Sobic005G186100 Sobic005G186100 Sobic002G070200--Sobic005G186100 Sobic004G186500--Sobic002G070200 Sobic001G399100 Sobic001G399100 Sobic004G186500--Sobic001G399100 Sobic004G186500--Sobic001G536500 Sobic004G186500--Sobic010G204600 Sobic009G046600 Sobic009G046600 Sobic004G186500--Sobic009G046600 Sobic005G109000 Sobic005G109000 Sobic004G186500--Sobic005G109000 Sobic004G186500--Sobic003G063200 Sobic005G228900 Sobic005G228900 Sobic004G186500--Sobic005G228900 Sobic005G028700 Sobic005G028700 Sobic004G186500--Sobic005G028700 Sobic001G067601 Sobic001G067601 Sobic003G162700--Sobic001G067601 Sobic009G070400 Sobic009G070400 Sobic003G162700--Sobic009G070400 Sobic003G162700--Sobic002G333400 Sobic006G158600 Sobic006G158600 Sobic003G162700--Sobic006G158600 Sobic003G334600 Sobic003G334600 Sobic003G162700--Sobic003G334600 Sobic010G238600 Sobic010G238600 Sobic003G162700--Sobic010G238600 Sobic010G274900 Sobic010G274900 Sobic003G162700--Sobic010G274900 Sobic007G025500 Sobic007G025500 Sobic003G162700--Sobic007G025500 Sobic008G136400 Sobic008G136400 Sobic003G162700--Sobic008G136400 Sobic004G144500 Sobic004G144500 Sobic009G230100--Sobic004G144500 Sobic009G077800 Sobic009G077800 Sobic009G230100--Sobic009G077800 Sobic007G087200 Sobic007G087200 Sobic009G230100--Sobic007G087200 Sobic004G166700 Sobic004G166700 Sobic009G230100--Sobic004G166700 Sobic003G393700 Sobic003G393700 Sobic009G230100--Sobic003G393700 Sobic002G345300 Sobic002G345300 Sobic009G230100--Sobic002G345300 Sobic010G268400 Sobic010G268400 Sobic009G230100--Sobic010G268400 Sobic004G101300 Sobic004G101300 Sobic009G230100--Sobic004G101300 Sobic003G417350 Sobic003G417350 Sobic009G230100--Sobic003G417350 Sobic006G044932--Sobic003G277500 Sobic001G343900 Sobic001G343900 Sobic006G044932--Sobic001G343900 Sobic006G044932--Sobic002G407700 Sobic006G044932--Sobic004G010300 Sobic005G228000 Sobic005G228000 Sobic006G044932--Sobic005G228000 Sobic006G044932--Sobic002G373001 Sobic007G196600 Sobic007G196600 Sobic006G044932--Sobic007G196600 Sobic006G138500 Sobic006G138500 Sobic006G044932--Sobic006G138500 Sobic006G044932--Sobic002G333300 Sobic006G246100 Sobic006G246100 Sobic010G194300--Sobic006G246100 Sobic005G080200 Sobic005G080200 Sobic010G194300--Sobic005G080200 Sobic010G194300--Sobic004G010300 Sobic003G285500 Sobic003G285500 Sobic010G194300--Sobic003G285500 Sobic003G296300 Sobic003G296300 Sobic010G194300--Sobic003G296300 Sobic010G194300--Sobic003G037500 Sobic010G194300--Sobic009G065300 Sobic006G047000 Sobic006G047000 Sobic010G194300--Sobic006G047000 Sobic010G250600 Sobic010G250600 Sobic010G194300--Sobic010G250600
Octagon: transcription factors


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