Gene annotation
Transcriptome id Sobic.003G417350.1
Synonym -
Functional annotation -
UniProt A0A1W0W1E2
Pfam PF12697
Panther DB PTHR10992 PTHR10992:SF857
NCBI CDD KOG1454; Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily)
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G23610 : methyl esterase 3
RAP-DB (Rice) LOC_Os01g70860.1 : esterase, putative, expressed
MaizeGDB (Corn) Zm00025a026126 , Zm00025a026127 , Zm00025a026122 , Zm00025a026128 , Zm00025a039191
Brachypodium KQK11404 , KQK11403
Barley HORVU3Hr1G098400.2 , HORVU3Hr1G098400.4 , HORVU3Hr1G098400.3 , HORVU3Hr1G098360.5 , HORVU3Hr1G098360.4 , HORVU3Hr1G098360.3 , HORVU3Hr1G098360.2
Wheat TraesCS3B02G495700 , TraesCS3B02G496100 , TraesCS3D02G449300 , TraesCS3D02G449300 , TraesCS3B02G496200 , TraesCS3B02G496200 , TraesCS3B02G495800 , TraesCS3D02G449200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G192100 expressed protein -
2 Sobic.002G326100 aspartic proteinase nepenthesin-1 precursor, putative, expressed -
3 Sobic.001G015100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pirin, putative, expressed K06911: quercetin 2,3-dioxygenase
4 Sobic.002G329000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@TKL_IRAK_DUF26-ld.3 - DUF26 kinases have homology to DUF26 containing loci, expressed -
5 Sobic.007G155000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@bifunctional monodehydroascorbate reductase and carbonic anhydrasenectarin-3 precursor, putative, expressed K01674: carbonic anhydrase
6 Sobic.001G038900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@DUF567 domain containing protein, putative, expressed -
7 Sobic.001G192600 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed K17794: mitochondrial import inner membrane translocase subunit TIM23
8 Sobic.010G268400 eukaryotic aspartyl protease domain containing protein, expressed -
9 Sobic.001G367600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
10 Sobic.004G101300 expressed protein -
11 Sobic.003G429000 NADPH quinone oxidoreductase, putative, expressed -
12 Sobic.004G075000 expressed protein -
13 Sobic.001G050100 Cupin domain containing protein, expressed -
14 Sobic.004G061200 expressed protein -
15 Sobic.002G140400 plastocyanin-like domain containing protein, putative, expressed -
16 Sobic.005G093000 - -
17 Sobic.001G423800 DNA binding protein, putative, expressed -
18 Sobic.009G074100 prenylated rab acceptor, putative, expressed -
19 Sobic.003G364600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyl hydrolases family 17, putative, expressed -
20 Sobic.003G041200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic003G417350 Sobic003G417350 Sobic003G192100 Sobic003G192100 Sobic003G417350--Sobic003G192100 Sobic002G326100 Sobic002G326100 Sobic003G417350--Sobic002G326100 Sobic001G015100 Sobic001G015100 Sobic003G417350--Sobic001G015100 Sobic002G329000 Sobic002G329000 Sobic003G417350--Sobic002G329000 Sobic007G155000 Sobic007G155000 Sobic003G417350--Sobic007G155000 Sobic001G038900 Sobic001G038900 Sobic003G417350--Sobic001G038900 Sobic001G192600 Sobic001G192600 Sobic003G417350--Sobic001G192600 Sobic010G268400 Sobic010G268400 Sobic003G417350--Sobic010G268400 Sobic001G367600 Sobic001G367600 Sobic003G417350--Sobic001G367600 Sobic005G018700 Sobic005G018700 Sobic003G192100--Sobic005G018700 Sobic004G101300 Sobic004G101300 Sobic003G192100--Sobic004G101300 Sobic003G037500 Sobic003G037500 Sobic003G192100--Sobic003G037500 Sobic003G192100--Sobic007G155000 Sobic002G245100 Sobic002G245100 Sobic003G192100--Sobic002G245100 Sobic001G231700 Sobic001G231700 Sobic003G192100--Sobic001G231700 Sobic001G050100 Sobic001G050100 Sobic003G192100--Sobic001G050100 Sobic003G192100--Sobic001G367600 Sobic004G340900 Sobic004G340900 Sobic003G192100--Sobic004G340900 Sobic002G326100--Sobic001G367600 Sobic004G112300 Sobic004G112300 Sobic002G326100--Sobic004G112300 Sobic004G243100 Sobic004G243100 Sobic002G326100--Sobic004G243100 Sobic002G326100--Sobic003G417350 Sobic002G326100--Sobic001G038900 Sobic002G192000 Sobic002G192000 Sobic002G326100--Sobic002G192000 Sobic001G231400 Sobic001G231400 Sobic002G326100--Sobic001G231400 Sobic001G423800 Sobic001G423800 Sobic002G326100--Sobic001G423800 Sobic005G029200 Sobic005G029200 Sobic002G326100--Sobic005G029200 Sobic002G140400 Sobic002G140400 Sobic001G015100--Sobic002G140400 Sobic004G187900 Sobic004G187900 Sobic001G015100--Sobic004G187900 Sobic003G430400 Sobic003G430400 Sobic001G015100--Sobic003G430400 Sobic007G155200 Sobic007G155200 Sobic001G015100--Sobic007G155200 Sobic001G124600 Sobic001G124600 Sobic001G015100--Sobic001G124600 Sobic001G015100--Sobic001G423800 Sobic010G238600 Sobic010G238600 Sobic001G015100--Sobic010G238600 Sobic001G015100--Sobic001G038900 Sobic002G211900 Sobic002G211900 Sobic001G015100--Sobic002G211900 Sobic005G093000 Sobic005G093000 Sobic002G329000--Sobic005G093000 Sobic003G429000 Sobic003G429000 Sobic002G329000--Sobic003G429000 Sobic002G329000--Sobic010G268400 Sobic001G389000 Sobic001G389000 Sobic002G329000--Sobic001G389000 Sobic002G329000--Sobic007G155000 Sobic002G329000--Sobic003G417350 Sobic003G037800 Sobic003G037800 Sobic002G329000--Sobic003G037800 Sobic002G329000--Sobic001G050100 Sobic010G195500 Sobic010G195500 Sobic002G329000--Sobic010G195500 Sobic001G435000 Sobic001G435000 Sobic007G155000--Sobic001G435000 Sobic004G208700 Sobic004G208700 Sobic007G155000--Sobic004G208700 Sobic009G234100 Sobic009G234100 Sobic007G155000--Sobic009G234100 Sobic009G159400 Sobic009G159400 Sobic007G155000--Sobic009G159400 Sobic007G155000--Sobic002G140400 Sobic004G229800 Sobic004G229800 Sobic007G155000--Sobic004G229800 Sobic007G155000--Sobic001G038900 Sobic010G066700 Sobic010G066700 Sobic007G155000--Sobic010G066700 Sobic010G259600 Sobic010G259600 Sobic007G155000--Sobic010G259600 Sobic001G038900--Sobic002G140400 Sobic001G140900 Sobic001G140900 Sobic001G038900--Sobic001G140900 Sobic008G136400 Sobic008G136400 Sobic001G038900--Sobic008G136400 Sobic008G050600 Sobic008G050600 Sobic001G038900--Sobic008G050600 Sobic001G038900--Sobic001G423800 Sobic001G038900--Sobic009G159400 Sobic003G345100 Sobic003G345100 Sobic001G038900--Sobic003G345100 Sobic001G038900--Sobic001G367600 Sobic004G189400 Sobic004G189400 Sobic001G038900--Sobic004G189400 Sobic001G192600--Sobic002G192000 Sobic001G192600--Sobic001G367600 Sobic001G192600--Sobic001G038900 Sobic006G158600 Sobic006G158600 Sobic001G192600--Sobic006G158600 Sobic001G192600--Sobic001G423800 Sobic001G055600 Sobic001G055600 Sobic001G192600--Sobic001G055600 Sobic001G481100 Sobic001G481100 Sobic001G192600--Sobic001G481100 Sobic009G221400 Sobic009G221400 Sobic001G192600--Sobic009G221400 Sobic002G353900 Sobic002G353900 Sobic001G192600--Sobic002G353900 Sobic010G268400--Sobic002G329000 Sobic001G516600 Sobic001G516600 Sobic010G268400--Sobic001G516600 Sobic010G268400--Sobic003G192100 Sobic010G268400--Sobic005G093000 Sobic001G107400 Sobic001G107400 Sobic010G268400--Sobic001G107400 Sobic010G268400--Sobic003G037800 Sobic010G268400--Sobic002G245100 Sobic010G268400--Sobic003G429000 Sobic010G268400--Sobic010G195500 Sobic001G367600--Sobic002G192000 Sobic001G367600--Sobic001G140900 Sobic001G367600--Sobic001G038900 Sobic001G367600--Sobic001G231700 Sobic002G017800 Sobic002G017800 Sobic001G367600--Sobic002G017800 Sobic004G100700 Sobic004G100700 Sobic001G367600--Sobic004G100700 Sobic006G103000 Sobic006G103000 Sobic001G367600--Sobic006G103000 Sobic002G055700 Sobic002G055700 Sobic001G367600--Sobic002G055700 Sobic001G367600--Sobic002G353900
Octagon: transcription factors


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