Gene annotation
Transcriptome id Sobic.002G326100.1
Synonym Sb02g035320
Functional annotation aspartic proteinase nepenthesin-1 precursor, putative, expressed
UniProt C5XAQ7
Pfam PF00026
Panther DB PTHR13683 PTHR13683:SF324
NCBI CDD KOG1339; Aspartyl protease
KEGG Orthology -
Gene Ontology GO:0006508; proteolysis GO:0004190aspartic-type endopeptidase activity


Orthologs (automatic annotation)
TAIR AT2G03200 : Eukaryotic aspartyl protease family protein
RAP-DB (Rice) LOC_Os07g34940.1 : aspartic proteinase nepenthesin-1 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a014039 , Zm00025a014038 , Zm00025a048273 , Zm00025a014835 , Zm00025a014836 , Zm00025a030627
Brachypodium KQK15916 , KQJ82866 , KQJ86115 , KQJ90483 , KQJ90482
Barley HORVU5Hr1G067660.1 , HORVU2Hr1G045020.1 , HORVU2Hr1G044940.1 , HORVU5Hr1G067700.1 , HORVU5Hr1G108750.1 , HORVU5Hr1G108750.2 , HORVU5Hr1G108750.3
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G367600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.004G112300 - -
3 Sobic.004G243100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
4 Sobic.003G417350 - -
5 Sobic.001G038900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@DUF567 domain containing protein, putative, expressed -
6 Sobic.002G192000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@AN1-like zinc finger domain containing protein, expressed -
7 Sobic.001G231400 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K00059: fabG, 3-oxoacyl-[acyl-carrier protein] reductase
8 Sobic.001G423800 DNA binding protein, putative, expressed -
9 Sobic.005G029200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@calmodulin-like protein 1, putative, expressed K13448: calcium-binding protein CML
10 Sobic.002G140400 plastocyanin-like domain containing protein, putative, expressed -
11 Sobic.001G192600 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed K17794: mitochondrial import inner membrane translocase subunit TIM23
12 Sobic.001G192200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytochrome P450, putative, expressed -
13 Sobic.002G263400 expressed protein -
14 Sobic.008G030100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@chalcone--flavonone isomerase, putative, expressed -
15 Sobic.007G061300 - -
16 Sobic.002G139400 AP2 domain containing protein, expressed -
17 Sobic.001G318700 glutathione S-transferase GSTU6, putative, expressed K00799: GST, glutathione S-transferase
18 Sobic.001G015100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pirin, putative, expressed K06911: quercetin 2,3-dioxygenase
19 Sobic.004G189400 expressed protein -
20 Sobic.001G481100 DUF581 domain containing protein, expressed -


Gene co-expression network
sample Sobic002G326100 Sobic002G326100 Sobic001G367600 Sobic001G367600 Sobic002G326100--Sobic001G367600 Sobic004G112300 Sobic004G112300 Sobic002G326100--Sobic004G112300 Sobic004G243100 Sobic004G243100 Sobic002G326100--Sobic004G243100 Sobic003G417350 Sobic003G417350 Sobic002G326100--Sobic003G417350 Sobic001G038900 Sobic001G038900 Sobic002G326100--Sobic001G038900 Sobic002G192000 Sobic002G192000 Sobic002G326100--Sobic002G192000 Sobic001G231400 Sobic001G231400 Sobic002G326100--Sobic001G231400 Sobic001G423800 Sobic001G423800 Sobic002G326100--Sobic001G423800 Sobic005G029200 Sobic005G029200 Sobic002G326100--Sobic005G029200 Sobic001G367600--Sobic002G192000 Sobic001G140900 Sobic001G140900 Sobic001G367600--Sobic001G140900 Sobic001G367600--Sobic001G038900 Sobic001G231700 Sobic001G231700 Sobic001G367600--Sobic001G231700 Sobic002G017800 Sobic002G017800 Sobic001G367600--Sobic002G017800 Sobic004G100700 Sobic004G100700 Sobic001G367600--Sobic004G100700 Sobic006G103000 Sobic006G103000 Sobic001G367600--Sobic006G103000 Sobic002G055700 Sobic002G055700 Sobic001G367600--Sobic002G055700 Sobic002G353900 Sobic002G353900 Sobic001G367600--Sobic002G353900 Sobic004G088551 Sobic004G088551 Sobic004G112300--Sobic004G088551 Sobic004G112300--Sobic002G326100 Sobic004G112300--Sobic001G231400 Sobic004G112300--Sobic002G192000 Sobic004G112300--Sobic004G243100 Sobic002G139400 Sobic002G139400 Sobic004G112300--Sobic002G139400 Sobic003G200700 Sobic003G200700 Sobic004G112300--Sobic003G200700 Sobic001G317000 Sobic001G317000 Sobic004G112300--Sobic001G317000 Sobic001G018300 Sobic001G018300 Sobic004G112300--Sobic001G018300 Sobic004G243100--Sobic001G018300 Sobic004G243100--Sobic001G231400 Sobic009G224100 Sobic009G224100 Sobic004G243100--Sobic009G224100 Sobic004G243100--Sobic001G423800 Sobic004G243100--Sobic002G139400 Sobic004G243100--Sobic002G192000 Sobic002G251000 Sobic002G251000 Sobic004G243100--Sobic002G251000 Sobic003G282901 Sobic003G282901 Sobic004G243100--Sobic003G282901 Sobic002G263400 Sobic002G263400 Sobic004G243100--Sobic002G263400 Sobic003G192100 Sobic003G192100 Sobic003G417350--Sobic003G192100 Sobic003G417350--Sobic002G326100 Sobic001G015100 Sobic001G015100 Sobic003G417350--Sobic001G015100 Sobic002G329000 Sobic002G329000 Sobic003G417350--Sobic002G329000 Sobic007G155000 Sobic007G155000 Sobic003G417350--Sobic007G155000 Sobic003G417350--Sobic001G038900 Sobic001G192600 Sobic001G192600 Sobic003G417350--Sobic001G192600 Sobic010G268400 Sobic010G268400 Sobic003G417350--Sobic010G268400 Sobic003G417350--Sobic001G367600 Sobic002G140400 Sobic002G140400 Sobic001G038900--Sobic002G140400 Sobic001G038900--Sobic001G140900 Sobic008G136400 Sobic008G136400 Sobic001G038900--Sobic008G136400 Sobic008G050600 Sobic008G050600 Sobic001G038900--Sobic008G050600 Sobic001G038900--Sobic001G423800 Sobic009G159400 Sobic009G159400 Sobic001G038900--Sobic009G159400 Sobic003G345100 Sobic003G345100 Sobic001G038900--Sobic003G345100 Sobic001G038900--Sobic001G367600 Sobic004G189400 Sobic004G189400 Sobic001G038900--Sobic004G189400 Sobic002G192000--Sobic001G018300 Sobic002G192000--Sobic001G367600 Sobic002G192000--Sobic001G231400 Sobic002G192000--Sobic004G243100 Sobic006G158600 Sobic006G158600 Sobic002G192000--Sobic006G158600 Sobic001G318700 Sobic001G318700 Sobic002G192000--Sobic001G318700 Sobic002G192000--Sobic001G038900 Sobic002G192000--Sobic002G140400 Sobic002G192000--Sobic001G423800 Sobic001G231400--Sobic001G018300 Sobic001G231400--Sobic004G243100 Sobic001G231400--Sobic002G192000 Sobic001G231400--Sobic002G251000 Sobic001G231400--Sobic001G318700 Sobic001G231400--Sobic002G263400 Sobic009G145500 Sobic009G145500 Sobic001G231400--Sobic009G145500 Sobic001G231400--Sobic001G367600 Sobic001G231400--Sobic002G139400 Sobic001G423800--Sobic004G243100 Sobic001G423800--Sobic002G140400 Sobic001G423800--Sobic001G038900 Sobic001G119400 Sobic001G119400 Sobic001G423800--Sobic001G119400 Sobic001G423800--Sobic001G018300 Sobic007G155100 Sobic007G155100 Sobic001G423800--Sobic007G155100 Sobic001G423800--Sobic008G136400 Sobic002G393000 Sobic002G393000 Sobic001G423800--Sobic002G393000 Sobic001G423800--Sobic004G189400 Sobic005G029200--Sobic004G189400 Sobic004G148200 Sobic004G148200 Sobic005G029200--Sobic004G148200 Sobic003G297600 Sobic003G297600 Sobic005G029200--Sobic003G297600 Sobic010G213700 Sobic010G213700 Sobic005G029200--Sobic010G213700 Sobic005G029200--Sobic002G055700 Sobic003G303100 Sobic003G303100 Sobic005G029200--Sobic003G303100 Sobic009G077800 Sobic009G077800 Sobic005G029200--Sobic009G077800 Sobic009G139400 Sobic009G139400 Sobic005G029200--Sobic009G139400 Sobic005G029200--Sobic001G423800
Octagon: transcription factors


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