Gene annotation
Transcriptome id Sobic.004G112300.1
Synonym
Functional annotation -
UniProt A0A194YNY6
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) Zm00025a034437
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G088551 - -
2 Sobic.002G326100 aspartic proteinase nepenthesin-1 precursor, putative, expressed -
3 Sobic.001G231400 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K00059: fabG, 3-oxoacyl-[acyl-carrier protein] reductase
4 Sobic.002G192000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@AN1-like zinc finger domain containing protein, expressed -
5 Sobic.004G243100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
6 Sobic.002G139400 AP2 domain containing protein, expressed -
7 Sobic.003G200700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@WRKY27, expressed -
8 Sobic.001G317000 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
9 Sobic.001G018300 cytochrome P450 71E1, putative, expressed -
10 Sobic.010G042500 expressed protein -
11 Sobic.002G263400 expressed protein -
12 Sobic.001G423800 DNA binding protein, putative, expressed -
13 Sobic.001G367600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.010G211900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@GDSL-like lipase/acylhydrolase, putative, expressed -
15 Sobic.001G192600 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed K17794: mitochondrial import inner membrane translocase subunit TIM23
16 Sobic.007G061300 - -
17 Sobic.001G015100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pirin, putative, expressed K06911: quercetin 2,3-dioxygenase
18 Sobic.006G158600 short-chain dehydrogenase/reductase, putative, expressed K15095: (+)-neomenthol dehydrogenase
19 Sobic.005G029200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@calmodulin-like protein 1, putative, expressed K13448: calcium-binding protein CML
20 Sobic.010G213700 GDU1, putative, expressed -


Gene co-expression network
sample Sobic004G112300 Sobic004G112300 Sobic004G088551 Sobic004G088551 Sobic004G112300--Sobic004G088551 Sobic002G326100 Sobic002G326100 Sobic004G112300--Sobic002G326100 Sobic001G231400 Sobic001G231400 Sobic004G112300--Sobic001G231400 Sobic002G192000 Sobic002G192000 Sobic004G112300--Sobic002G192000 Sobic004G243100 Sobic004G243100 Sobic004G112300--Sobic004G243100 Sobic002G139400 Sobic002G139400 Sobic004G112300--Sobic002G139400 Sobic003G200700 Sobic003G200700 Sobic004G112300--Sobic003G200700 Sobic001G317000 Sobic001G317000 Sobic004G112300--Sobic001G317000 Sobic001G018300 Sobic001G018300 Sobic004G112300--Sobic001G018300 Sobic004G088551--Sobic001G317000 Sobic002G195400 Sobic002G195400 Sobic004G088551--Sobic002G195400 Sobic005G101800 Sobic005G101800 Sobic004G088551--Sobic005G101800 Sobic007G067600 Sobic007G067600 Sobic004G088551--Sobic007G067600 Sobic010G117900 Sobic010G117900 Sobic004G088551--Sobic010G117900 Sobic001G317200 Sobic001G317200 Sobic004G088551--Sobic001G317200 Sobic001G423800 Sobic001G423800 Sobic004G088551--Sobic001G423800 Sobic007G061300 Sobic007G061300 Sobic004G088551--Sobic007G061300 Sobic004G088551--Sobic004G112300 Sobic001G367600 Sobic001G367600 Sobic002G326100--Sobic001G367600 Sobic002G326100--Sobic004G112300 Sobic002G326100--Sobic004G243100 Sobic003G417350 Sobic003G417350 Sobic002G326100--Sobic003G417350 Sobic001G038900 Sobic001G038900 Sobic002G326100--Sobic001G038900 Sobic002G326100--Sobic002G192000 Sobic002G326100--Sobic001G231400 Sobic002G326100--Sobic001G423800 Sobic005G029200 Sobic005G029200 Sobic002G326100--Sobic005G029200 Sobic001G231400--Sobic001G018300 Sobic001G231400--Sobic004G243100 Sobic001G231400--Sobic002G192000 Sobic002G251000 Sobic002G251000 Sobic001G231400--Sobic002G251000 Sobic001G318700 Sobic001G318700 Sobic001G231400--Sobic001G318700 Sobic002G263400 Sobic002G263400 Sobic001G231400--Sobic002G263400 Sobic009G145500 Sobic009G145500 Sobic001G231400--Sobic009G145500 Sobic001G231400--Sobic001G367600 Sobic001G231400--Sobic002G139400 Sobic002G192000--Sobic001G018300 Sobic002G192000--Sobic001G367600 Sobic002G192000--Sobic001G231400 Sobic002G192000--Sobic004G243100 Sobic006G158600 Sobic006G158600 Sobic002G192000--Sobic006G158600 Sobic002G192000--Sobic001G318700 Sobic002G192000--Sobic001G038900 Sobic002G140400 Sobic002G140400 Sobic002G192000--Sobic002G140400 Sobic002G192000--Sobic001G423800 Sobic004G243100--Sobic001G018300 Sobic004G243100--Sobic001G231400 Sobic009G224100 Sobic009G224100 Sobic004G243100--Sobic009G224100 Sobic004G243100--Sobic001G423800 Sobic004G243100--Sobic002G139400 Sobic004G243100--Sobic002G192000 Sobic004G243100--Sobic002G251000 Sobic003G282901 Sobic003G282901 Sobic004G243100--Sobic003G282901 Sobic004G243100--Sobic002G263400 Sobic002G139400--Sobic004G243100 Sobic002G139400--Sobic009G224100 Sobic002G184200 Sobic002G184200 Sobic002G139400--Sobic002G184200 Sobic001G192200 Sobic001G192200 Sobic002G139400--Sobic001G192200 Sobic002G139400--Sobic001G231400 Sobic002G139400--Sobic002G251000 Sobic002G139400--Sobic003G282901 Sobic002G139400--Sobic001G018300 Sobic002G139400--Sobic001G423800 Sobic007G227300 Sobic007G227300 Sobic003G200700--Sobic007G227300 Sobic006G268800 Sobic006G268800 Sobic003G200700--Sobic006G268800 Sobic010G211900 Sobic010G211900 Sobic003G200700--Sobic010G211900 Sobic004G148200 Sobic004G148200 Sobic003G200700--Sobic004G148200 Sobic003G264400 Sobic003G264400 Sobic003G200700--Sobic003G264400 Sobic006G099900 Sobic006G099900 Sobic003G200700--Sobic006G099900 Sobic003G200700--Sobic001G231400 Sobic003G200700--Sobic005G101800 Sobic003G200700--Sobic004G243100 Sobic001G317000--Sobic004G088551 Sobic001G317000--Sobic001G423800 Sobic006G275200 Sobic006G275200 Sobic001G317000--Sobic006G275200 Sobic001G119400 Sobic001G119400 Sobic001G317000--Sobic001G119400 Sobic001G317000--Sobic002G195400 Sobic001G097600 Sobic001G097600 Sobic001G317000--Sobic001G097600 Sobic002G261000 Sobic002G261000 Sobic001G317000--Sobic002G261000 Sobic009G183400 Sobic009G183400 Sobic001G317000--Sobic009G183400 Sobic001G317000--Sobic001G038900 Sobic001G018300--Sobic004G243100 Sobic001G018300--Sobic001G231400 Sobic001G018300--Sobic002G192000 Sobic001G018300--Sobic001G318700 Sobic001G018300--Sobic001G423800 Sobic001G018300--Sobic002G263400 Sobic004G229800 Sobic004G229800 Sobic001G018300--Sobic004G229800 Sobic001G018300--Sobic001G367600 Sobic007G155100 Sobic007G155100 Sobic001G018300--Sobic007G155100
Octagon: transcription factors


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