Gene annotation
Transcriptome id Sobic.010G042500.1
Synonym
Functional annotation expressed protein
UniProt A0A194YH77
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium PNT76526
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G243100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
2 Sobic.001G018300 cytochrome P450 71E1, putative, expressed -
3 Sobic.001G402200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxidoreductase, short chain dehydrogenase/reductase family, putative, expressed -
4 Sobic.010G211900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@GDSL-like lipase/acylhydrolase, putative, expressed -
5 Sobic.007G155100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@bifunctional monodehydroascorbate reductase and carbonic anhydrasenectarin-3 precursor, putative, expressed K01674: carbonic anhydrase
6 Sobic.001G231400 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K00059: fabG, 3-oxoacyl-[acyl-carrier protein] reductase
7 Sobic.003G200700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@WRKY27, expressed -
8 Sobic.002G139400 AP2 domain containing protein, expressed -
9 Sobic.009G224100 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
10 Sobic.002G192000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@AN1-like zinc finger domain containing protein, expressed -
11 Sobic.002G184200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@heat shock protein DnaJ, putative, expressed -
12 Sobic.001G423800 DNA binding protein, putative, expressed -
13 Sobic.002G263400 expressed protein -
14 Sobic.007G227300 plastocyanin-like domain containing protein, putative, expressed -
15 Sobic.001G367600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.010G084300 highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
17 Sobic.006G103000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.006G268800 transporter family protein, putative, expressed -
19 Sobic.003G264400 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
20 Sobic.001G231700 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K00059: fabG, 3-oxoacyl-[acyl-carrier protein] reductase


Gene co-expression network
sample Sobic010G042500 Sobic010G042500 Sobic004G243100 Sobic004G243100 Sobic010G042500--Sobic004G243100 Sobic001G018300 Sobic001G018300 Sobic010G042500--Sobic001G018300 Sobic001G402200 Sobic001G402200 Sobic010G042500--Sobic001G402200 Sobic010G211900 Sobic010G211900 Sobic010G042500--Sobic010G211900 Sobic007G155100 Sobic007G155100 Sobic010G042500--Sobic007G155100 Sobic001G231400 Sobic001G231400 Sobic010G042500--Sobic001G231400 Sobic003G200700 Sobic003G200700 Sobic010G042500--Sobic003G200700 Sobic002G139400 Sobic002G139400 Sobic010G042500--Sobic002G139400 Sobic009G224100 Sobic009G224100 Sobic010G042500--Sobic009G224100 Sobic004G243100--Sobic001G018300 Sobic004G243100--Sobic001G231400 Sobic004G243100--Sobic009G224100 Sobic001G423800 Sobic001G423800 Sobic004G243100--Sobic001G423800 Sobic004G243100--Sobic002G139400 Sobic002G192000 Sobic002G192000 Sobic004G243100--Sobic002G192000 Sobic002G251000 Sobic002G251000 Sobic004G243100--Sobic002G251000 Sobic003G282901 Sobic003G282901 Sobic004G243100--Sobic003G282901 Sobic002G263400 Sobic002G263400 Sobic004G243100--Sobic002G263400 Sobic001G018300--Sobic004G243100 Sobic001G018300--Sobic001G231400 Sobic001G018300--Sobic002G192000 Sobic001G318700 Sobic001G318700 Sobic001G018300--Sobic001G318700 Sobic001G018300--Sobic001G423800 Sobic001G018300--Sobic002G263400 Sobic004G229800 Sobic004G229800 Sobic001G018300--Sobic004G229800 Sobic001G367600 Sobic001G367600 Sobic001G018300--Sobic001G367600 Sobic001G018300--Sobic007G155100 Sobic001G231700 Sobic001G231700 Sobic001G402200--Sobic001G231700 Sobic006G103000 Sobic006G103000 Sobic001G402200--Sobic006G103000 Sobic001G402200--Sobic007G155100 Sobic001G402200--Sobic010G211900 Sobic001G402200--Sobic001G367600 Sobic001G402200--Sobic010G042500 Sobic006G268800 Sobic006G268800 Sobic001G402200--Sobic006G268800 Sobic007G227300 Sobic007G227300 Sobic001G402200--Sobic007G227300 Sobic001G402200--Sobic001G018300 Sobic010G211900--Sobic001G402200 Sobic010G211900--Sobic003G200700 Sobic010G211900--Sobic007G227300 Sobic010G211900--Sobic006G103000 Sobic010G211900--Sobic006G268800 Sobic010G211900--Sobic004G243100 Sobic010G211900--Sobic001G018300 Sobic010G211900--Sobic001G367600 Sobic010G211900--Sobic010G042500 Sobic007G155100--Sobic001G423800 Sobic007G155100--Sobic001G402200 Sobic007G155100--Sobic001G018300 Sobic001G365100 Sobic001G365100 Sobic007G155100--Sobic001G365100 Sobic007G155100--Sobic004G243100 Sobic006G084600 Sobic006G084600 Sobic007G155100--Sobic006G084600 Sobic010G066700 Sobic010G066700 Sobic007G155100--Sobic010G066700 Sobic004G221500 Sobic004G221500 Sobic007G155100--Sobic004G221500 Sobic002G184200 Sobic002G184200 Sobic007G155100--Sobic002G184200 Sobic001G231400--Sobic001G018300 Sobic001G231400--Sobic004G243100 Sobic001G231400--Sobic002G192000 Sobic001G231400--Sobic002G251000 Sobic001G231400--Sobic001G318700 Sobic001G231400--Sobic002G263400 Sobic009G145500 Sobic009G145500 Sobic001G231400--Sobic009G145500 Sobic001G231400--Sobic001G367600 Sobic001G231400--Sobic002G139400 Sobic003G200700--Sobic007G227300 Sobic003G200700--Sobic006G268800 Sobic003G200700--Sobic010G211900 Sobic004G148200 Sobic004G148200 Sobic003G200700--Sobic004G148200 Sobic003G264400 Sobic003G264400 Sobic003G200700--Sobic003G264400 Sobic006G099900 Sobic006G099900 Sobic003G200700--Sobic006G099900 Sobic003G200700--Sobic001G231400 Sobic005G101800 Sobic005G101800 Sobic003G200700--Sobic005G101800 Sobic003G200700--Sobic004G243100 Sobic002G139400--Sobic004G243100 Sobic002G139400--Sobic009G224100 Sobic002G139400--Sobic002G184200 Sobic001G192200 Sobic001G192200 Sobic002G139400--Sobic001G192200 Sobic002G139400--Sobic001G231400 Sobic002G139400--Sobic002G251000 Sobic002G139400--Sobic003G282901 Sobic002G139400--Sobic001G018300 Sobic002G139400--Sobic001G423800 Sobic009G224100--Sobic004G243100 Sobic009G224100--Sobic002G139400 Sobic009G224100--Sobic002G184200 Sobic008G187001 Sobic008G187001 Sobic009G224100--Sobic008G187001 Sobic007G155200 Sobic007G155200 Sobic009G224100--Sobic007G155200 Sobic009G224100--Sobic001G423800 Sobic002G388900 Sobic002G388900 Sobic009G224100--Sobic002G388900 Sobic009G224100--Sobic001G192200 Sobic001G330100 Sobic001G330100 Sobic009G224100--Sobic001G330100
Octagon: transcription factors


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