Gene annotation
Transcriptome id Sobic.010G213700.1
Synonym ATGDU3, GDU3, Sb10g026030, LSB1
Functional annotation GDU1, putative, expressed
UniProt C5Z772
Pfam -
Panther DB PTHR33228 PTHR33228:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G57685 : glutamine dumper 3
RAP-DB (Rice) LOC_Os06g44420.1 : GDU1, putative, expressed
MaizeGDB (Corn) Zm00025a051717 , Zm00025a042011
Brachypodium KQK16881
Barley HORVU7Hr1G111320.1 , HORVU1Hr1G003060.2 , HORVU1Hr1G003060.1 , HORVU1Hr1G003070.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G029200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@calmodulin-like protein 1, putative, expressed K13448: calcium-binding protein CML
2 Sobic.002G366600 expressed protein -
3 Sobic.001G119400 microsomal glutathione S-transferase 3, putative, expressed K00799: GST, glutathione S-transferase
4 Sobic.009G139400 expressed protein -
5 Sobic.004G148200 Cupin domain containing protein, expressed -
6 Sobic.003G297600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor 2, putative, expressed -
7 Sobic.002G415100 POEI50 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
8 Sobic.004G189400 expressed protein -
9 Sobic.003G280200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
10 Sobic.007G227300 plastocyanin-like domain containing protein, putative, expressed -
11 Sobic.002G055700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glycosyl hydrolase, putative, expressed K01183: chitinase
12 Sobic.006G099900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@plastocyanin-like domain containing protein, putative, expressed -
13 Sobic.009G077800 expressed protein -
14 Sobic.007G184600 60S ribosomal protein L38, putative, expressed K02923: RP-L38e, large subunit ribosomal protein L38e
15 Sobic.004G189500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.001G317000 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
17 Sobic.001G038900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@DUF567 domain containing protein, putative, expressed -
18 Sobic.001G140900 helix-loop-helix DNA-binding protein, putative, expressed -
19 Sobic.008G050600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor ERF110, putative, expressed -
20 Sobic.001G367600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic010G213700 Sobic010G213700 Sobic005G029200 Sobic005G029200 Sobic010G213700--Sobic005G029200 Sobic002G366600 Sobic002G366600 Sobic010G213700--Sobic002G366600 Sobic001G119400 Sobic001G119400 Sobic010G213700--Sobic001G119400 Sobic009G139400 Sobic009G139400 Sobic010G213700--Sobic009G139400 Sobic004G148200 Sobic004G148200 Sobic010G213700--Sobic004G148200 Sobic003G297600 Sobic003G297600 Sobic010G213700--Sobic003G297600 Sobic002G415100 Sobic002G415100 Sobic010G213700--Sobic002G415100 Sobic004G189400 Sobic004G189400 Sobic010G213700--Sobic004G189400 Sobic003G280200 Sobic003G280200 Sobic010G213700--Sobic003G280200 Sobic005G029200--Sobic004G189400 Sobic005G029200--Sobic004G148200 Sobic005G029200--Sobic003G297600 Sobic005G029200--Sobic010G213700 Sobic002G055700 Sobic002G055700 Sobic005G029200--Sobic002G055700 Sobic003G303100 Sobic003G303100 Sobic005G029200--Sobic003G303100 Sobic009G077800 Sobic009G077800 Sobic005G029200--Sobic009G077800 Sobic005G029200--Sobic009G139400 Sobic001G423800 Sobic001G423800 Sobic005G029200--Sobic001G423800 Sobic002G366600--Sobic010G213700 Sobic002G366600--Sobic009G077800 Sobic002G366600--Sobic009G139400 Sobic007G184600 Sobic007G184600 Sobic002G366600--Sobic007G184600 Sobic002G366600--Sobic003G297600 Sobic002G017800 Sobic002G017800 Sobic002G366600--Sobic002G017800 Sobic002G366600--Sobic002G055700 Sobic009G231000 Sobic009G231000 Sobic002G366600--Sobic009G231000 Sobic005G183100 Sobic005G183100 Sobic002G366600--Sobic005G183100 Sobic009G183400 Sobic009G183400 Sobic001G119400--Sobic009G183400 Sobic001G119400--Sobic001G423800 Sobic002G393000 Sobic002G393000 Sobic001G119400--Sobic002G393000 Sobic009G008900 Sobic009G008900 Sobic001G119400--Sobic009G008900 Sobic001G119400--Sobic009G139400 Sobic001G038900 Sobic001G038900 Sobic001G119400--Sobic001G038900 Sobic006G275200 Sobic006G275200 Sobic001G119400--Sobic006G275200 Sobic006G099900 Sobic006G099900 Sobic001G119400--Sobic006G099900 Sobic003G417800 Sobic003G417800 Sobic001G119400--Sobic003G417800 Sobic009G139400--Sobic009G077800 Sobic009G139400--Sobic003G297600 Sobic009G139400--Sobic001G119400 Sobic001G177800 Sobic001G177800 Sobic009G139400--Sobic001G177800 Sobic009G139400--Sobic007G184600 Sobic010G066700 Sobic010G066700 Sobic009G139400--Sobic010G066700 Sobic002G353900 Sobic002G353900 Sobic009G139400--Sobic002G353900 Sobic003G382600 Sobic003G382600 Sobic009G139400--Sobic003G382600 Sobic009G139400--Sobic005G029200 Sobic004G148200--Sobic005G029200 Sobic004G148200--Sobic002G055700 Sobic004G189500 Sobic004G189500 Sobic004G148200--Sobic004G189500 Sobic007G227300 Sobic007G227300 Sobic004G148200--Sobic007G227300 Sobic004G148200--Sobic004G189400 Sobic004G148200--Sobic003G303100 Sobic006G268800 Sobic006G268800 Sobic004G148200--Sobic006G268800 Sobic009G145500 Sobic009G145500 Sobic004G148200--Sobic009G145500 Sobic003G200700 Sobic003G200700 Sobic004G148200--Sobic003G200700 Sobic003G297600--Sobic009G077800 Sobic003G297600--Sobic009G139400 Sobic001G070800 Sobic001G070800 Sobic003G297600--Sobic001G070800 Sobic003G297600--Sobic005G029200 Sobic003G297600--Sobic004G189400 Sobic008G050600 Sobic008G050600 Sobic003G297600--Sobic008G050600 Sobic001G317200 Sobic001G317200 Sobic003G297600--Sobic001G317200 Sobic005G091500 Sobic005G091500 Sobic003G297600--Sobic005G091500 Sobic003G297600--Sobic002G055700 Sobic010G239300 Sobic010G239300 Sobic002G415100--Sobic010G239300 Sobic002G415100--Sobic003G280200 Sobic009G128700 Sobic009G128700 Sobic002G415100--Sobic009G128700 Sobic002G415100--Sobic001G317200 Sobic002G415100--Sobic003G297600 Sobic002G415100--Sobic010G213700 Sobic002G034800 Sobic002G034800 Sobic002G415100--Sobic002G034800 Sobic002G415100--Sobic009G231000 Sobic003G156200 Sobic003G156200 Sobic002G415100--Sobic003G156200 Sobic002G140400 Sobic002G140400 Sobic004G189400--Sobic002G140400 Sobic004G189400--Sobic005G091500 Sobic002G263400 Sobic002G263400 Sobic004G189400--Sobic002G263400 Sobic004G189400--Sobic008G050600 Sobic004G237800 Sobic004G237800 Sobic004G189400--Sobic004G237800 Sobic004G189400--Sobic003G382600 Sobic004G189400--Sobic006G099900 Sobic008G136400 Sobic008G136400 Sobic004G189400--Sobic008G136400 Sobic004G189400--Sobic005G029200 Sobic003G417700 Sobic003G417700 Sobic003G280200--Sobic003G417700 Sobic003G280200--Sobic002G415100 Sobic003G280200--Sobic009G139400 Sobic003G280200--Sobic003G297600 Sobic003G280200--Sobic009G077800 Sobic003G280200--Sobic005G029200 Sobic003G364000 Sobic003G364000 Sobic003G280200--Sobic003G364000 Sobic002G004900 Sobic002G004900 Sobic003G280200--Sobic002G004900 Sobic003G280200--Sobic002G034800
Octagon: transcription factors


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