Gene annotation
Transcriptome id Sobic.004G189500.1
Synonym Sb04g023770
Functional annotation SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence. (PubMedID : 27586543)
expressed protein
UniProt C5XVP1
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os02g36530.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G148200 Cupin domain containing protein, expressed -
2 Sobic.002G055700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glycosyl hydrolase, putative, expressed K01183: chitinase
3 Sobic.004G189400 expressed protein -
4 Sobic.005G091500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@permease domain containing protein, putative, expressed K06901: putative MFS transporter, AGZA family, xanthine/uracil permease
5 Sobic.006G039100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RALFL36 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
6 Sobic.003G297600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor 2, putative, expressed -
7 Sobic.005G029200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@calmodulin-like protein 1, putative, expressed K13448: calcium-binding protein CML
8 Sobic.009G231000 - -
9 Sobic.010G213700 GDU1, putative, expressed -
10 Sobic.008G139600 lectin-like receptor kinase, putative, expressed -
11 Sobic.004G321300 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed K09286: EREBP-like factor
12 Sobic.003G303100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@dynein light chain type 1 domain containing protein, expressed K10418: dynein light chain LC8-type
13 Sobic.002G055600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glycosyl hydrolase, putative, expressed K01183: chitinase
14 Sobic.010G239300 oryzain beta chain precursor, putative, expressed -
15 Sobic.002G416600 peroxidase precursor, putative, expressed K00430: peroxidase
16 Sobic.001G325400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed -
17 Sobic.003G382600 ARGOS, putative, expressed -
18 Sobic.009G077800 expressed protein -
19 Sobic.005G177600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@glycosyl hydrolase, putative, expressed K01183: chitinase
20 Sobic.004G237800 glycosyl transferase 8 domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic004G189500 Sobic004G189500 Sobic004G148200 Sobic004G148200 Sobic004G189500--Sobic004G148200 Sobic002G055700 Sobic002G055700 Sobic004G189500--Sobic002G055700 Sobic004G189400 Sobic004G189400 Sobic004G189500--Sobic004G189400 Sobic005G091500 Sobic005G091500 Sobic004G189500--Sobic005G091500 Sobic006G039100 Sobic006G039100 Sobic004G189500--Sobic006G039100 Sobic003G297600 Sobic003G297600 Sobic004G189500--Sobic003G297600 Sobic005G029200 Sobic005G029200 Sobic004G189500--Sobic005G029200 Sobic009G231000 Sobic009G231000 Sobic004G189500--Sobic009G231000 Sobic010G213700 Sobic010G213700 Sobic004G189500--Sobic010G213700 Sobic004G148200--Sobic005G029200 Sobic004G148200--Sobic002G055700 Sobic004G148200--Sobic004G189500 Sobic007G227300 Sobic007G227300 Sobic004G148200--Sobic007G227300 Sobic004G148200--Sobic004G189400 Sobic003G303100 Sobic003G303100 Sobic004G148200--Sobic003G303100 Sobic006G268800 Sobic006G268800 Sobic004G148200--Sobic006G268800 Sobic009G145500 Sobic009G145500 Sobic004G148200--Sobic009G145500 Sobic003G200700 Sobic003G200700 Sobic004G148200--Sobic003G200700 Sobic002G055700--Sobic003G303100 Sobic003G382600 Sobic003G382600 Sobic002G055700--Sobic003G382600 Sobic004G237800 Sobic004G237800 Sobic002G055700--Sobic004G237800 Sobic003G426400 Sobic003G426400 Sobic002G055700--Sobic003G426400 Sobic002G353900 Sobic002G353900 Sobic002G055700--Sobic002G353900 Sobic002G055700--Sobic004G148200 Sobic002G055700--Sobic004G189400 Sobic002G338500 Sobic002G338500 Sobic002G055700--Sobic002G338500 Sobic001G367600 Sobic001G367600 Sobic002G055700--Sobic001G367600 Sobic002G140400 Sobic002G140400 Sobic004G189400--Sobic002G140400 Sobic004G189400--Sobic005G091500 Sobic002G263400 Sobic002G263400 Sobic004G189400--Sobic002G263400 Sobic008G050600 Sobic008G050600 Sobic004G189400--Sobic008G050600 Sobic004G189400--Sobic004G237800 Sobic004G189400--Sobic003G382600 Sobic006G099900 Sobic006G099900 Sobic004G189400--Sobic006G099900 Sobic008G136400 Sobic008G136400 Sobic004G189400--Sobic008G136400 Sobic004G189400--Sobic005G029200 Sobic005G091500--Sobic004G189400 Sobic005G091500--Sobic004G237800 Sobic005G063100 Sobic005G063100 Sobic005G091500--Sobic005G063100 Sobic005G091500--Sobic008G050600 Sobic005G091500--Sobic002G055700 Sobic005G091500--Sobic006G099900 Sobic005G091500--Sobic003G382600 Sobic009G159400 Sobic009G159400 Sobic005G091500--Sobic009G159400 Sobic003G286600 Sobic003G286600 Sobic005G091500--Sobic003G286600 Sobic001G325400 Sobic001G325400 Sobic006G039100--Sobic001G325400 Sobic006G039100--Sobic009G231000 Sobic001G462700 Sobic001G462700 Sobic006G039100--Sobic001G462700 Sobic006G039100--Sobic004G189500 Sobic003G087300 Sobic003G087300 Sobic006G039100--Sobic003G087300 Sobic002G416600 Sobic002G416600 Sobic006G039100--Sobic002G416600 Sobic002G366600 Sobic002G366600 Sobic006G039100--Sobic002G366600 Sobic004G148100 Sobic004G148100 Sobic006G039100--Sobic004G148100 Sobic009G077800 Sobic009G077800 Sobic006G039100--Sobic009G077800 Sobic003G297600--Sobic009G077800 Sobic009G139400 Sobic009G139400 Sobic003G297600--Sobic009G139400 Sobic001G070800 Sobic001G070800 Sobic003G297600--Sobic001G070800 Sobic003G297600--Sobic005G029200 Sobic003G297600--Sobic004G189400 Sobic003G297600--Sobic008G050600 Sobic001G317200 Sobic001G317200 Sobic003G297600--Sobic001G317200 Sobic003G297600--Sobic005G091500 Sobic003G297600--Sobic002G055700 Sobic005G029200--Sobic004G189400 Sobic005G029200--Sobic004G148200 Sobic005G029200--Sobic003G297600 Sobic005G029200--Sobic010G213700 Sobic005G029200--Sobic002G055700 Sobic005G029200--Sobic003G303100 Sobic005G029200--Sobic009G077800 Sobic005G029200--Sobic009G139400 Sobic001G423800 Sobic001G423800 Sobic005G029200--Sobic001G423800 Sobic003G364300 Sobic003G364300 Sobic009G231000--Sobic003G364300 Sobic010G259600 Sobic010G259600 Sobic009G231000--Sobic010G259600 Sobic009G231000--Sobic001G325400 Sobic009G231000--Sobic006G039100 Sobic002G125700 Sobic002G125700 Sobic009G231000--Sobic002G125700 Sobic009G231000--Sobic002G055700 Sobic009G231000--Sobic003G087300 Sobic009G231000--Sobic003G297600 Sobic010G156500 Sobic010G156500 Sobic009G231000--Sobic010G156500 Sobic010G213700--Sobic005G029200 Sobic010G213700--Sobic002G366600 Sobic001G119400 Sobic001G119400 Sobic010G213700--Sobic001G119400 Sobic010G213700--Sobic009G139400 Sobic010G213700--Sobic004G148200 Sobic010G213700--Sobic003G297600 Sobic002G415100 Sobic002G415100 Sobic010G213700--Sobic002G415100 Sobic010G213700--Sobic004G189400 Sobic003G280200 Sobic003G280200 Sobic010G213700--Sobic003G280200
Octagon: transcription factors


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