Gene annotation
Transcriptome id Sobic.001G317000.1
Synonym ATGSTU17, GST30B, GST30, ERD9, Sb01g030780
Functional annotation glutathione S-transferase, putative, expressed
UniProt C5WUH1
Pfam PF13410 PF13417
Panther DB PTHR11260 PTHR11260:SF269
NCBI CDD KOG0406; Glutathione S-transferase
KEGG Orthology K00799; GST, glutathione S-transferase
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G10370 : Glutathione S-transferase family protein
RAP-DB (Rice) LOC_Os10g38740.1 : glutathione S-transferase, putative, expressed
MaizeGDB (Corn) Zm00025a053619 , Zm00025a003111
Brachypodium KQJ97561 , KQJ97562
Barley HORVU1Hr1G049250.1 , HORVU1Hr1G049250.3 , HORVU1Hr1G049250.2 , HORVU1Hr1G049280.1
Wheat TraesCS1A02G186200 , TraesCS1B02G194000 , TraesCS1D02G190600
Populus -


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cDNA sequences
Sobic.001G317000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G088551 - -
2 Sobic.001G423800 DNA binding protein, putative, expressed -
3 Sobic.006G275200 CHCH domain containing protein, expressed -
4 Sobic.001G119400 microsomal glutathione S-transferase 3, putative, expressed K00799: GST, glutathione S-transferase
5 Sobic.002G195400 "Cinnamyl alcohol dehydrogenase, expressed in lignifying tissues"(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@a cinnamyl alcohol dehydrogenase (CAD)(PubmedID : 26440083)@Protein mannitol dehydrogenase (Os)(PubMedID : 27208977)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
6 Sobic.001G097600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@"salidroside biosynthesis, ethanol degradation II, phytol degradation"(PubMedID : 21853065)@dehydrogenase, putative, expressed K18857: alcohol dehydrogenase class-P
7 Sobic.002G261000 expressed protein -
8 Sobic.009G183400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyl hydrolases family 17, putative, expressed -
9 Sobic.001G038900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@DUF567 domain containing protein, putative, expressed -
10 Sobic.007G067600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Cupin domain containing protein, expressed -
11 Sobic.008G136400 expressed protein -
12 Sobic.010G178500 Expressed in drought and heat(PubMedID : 29862293)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@endothelial differentiation-related factor 1, putative, expressed K03627: putative transcription factor
13 Sobic.005G029200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@calmodulin-like protein 1, putative, expressed K13448: calcium-binding protein CML
14 Sobic.009G008900 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed -
15 Sobic.002G393000 pyrrolidone-carboxylate peptidase, putative, expressed K01304: pyroglutamyl-peptidase
16 Sobic.010G213700 GDU1, putative, expressed -
17 Sobic.004G243100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
18 Sobic.002G140400 plastocyanin-like domain containing protein, putative, expressed -
19 Sobic.002G104900 B12D protein, putative, expressed -
20 Sobic.004G216600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsGrx_C2.1 - glutaredoxin subgroup I, expressed K03676: grxC, GLRX, glutaredoxin 3


Gene co-expression network
sample Sobic001G317000 Sobic001G317000 Sobic004G088551 Sobic004G088551 Sobic001G317000--Sobic004G088551 Sobic001G423800 Sobic001G423800 Sobic001G317000--Sobic001G423800 Sobic006G275200 Sobic006G275200 Sobic001G317000--Sobic006G275200 Sobic001G119400 Sobic001G119400 Sobic001G317000--Sobic001G119400 Sobic002G195400 Sobic002G195400 Sobic001G317000--Sobic002G195400 Sobic001G097600 Sobic001G097600 Sobic001G317000--Sobic001G097600 Sobic002G261000 Sobic002G261000 Sobic001G317000--Sobic002G261000 Sobic009G183400 Sobic009G183400 Sobic001G317000--Sobic009G183400 Sobic001G038900 Sobic001G038900 Sobic001G317000--Sobic001G038900 Sobic004G088551--Sobic001G317000 Sobic004G088551--Sobic002G195400 Sobic005G101800 Sobic005G101800 Sobic004G088551--Sobic005G101800 Sobic007G067600 Sobic007G067600 Sobic004G088551--Sobic007G067600 Sobic010G117900 Sobic010G117900 Sobic004G088551--Sobic010G117900 Sobic001G317200 Sobic001G317200 Sobic004G088551--Sobic001G317200 Sobic004G088551--Sobic001G423800 Sobic007G061300 Sobic007G061300 Sobic004G088551--Sobic007G061300 Sobic004G112300 Sobic004G112300 Sobic004G088551--Sobic004G112300 Sobic004G243100 Sobic004G243100 Sobic001G423800--Sobic004G243100 Sobic002G140400 Sobic002G140400 Sobic001G423800--Sobic002G140400 Sobic001G423800--Sobic001G038900 Sobic001G423800--Sobic001G119400 Sobic001G018300 Sobic001G018300 Sobic001G423800--Sobic001G018300 Sobic007G155100 Sobic007G155100 Sobic001G423800--Sobic007G155100 Sobic008G136400 Sobic008G136400 Sobic001G423800--Sobic008G136400 Sobic002G393000 Sobic002G393000 Sobic001G423800--Sobic002G393000 Sobic004G189400 Sobic004G189400 Sobic001G423800--Sobic004G189400 Sobic006G275200--Sobic008G136400 Sobic006G275200--Sobic002G393000 Sobic009G008900 Sobic009G008900 Sobic006G275200--Sobic009G008900 Sobic006G173900 Sobic006G173900 Sobic006G275200--Sobic006G173900 Sobic006G275200--Sobic001G097600 Sobic006G275200--Sobic001G119400 Sobic003G367200 Sobic003G367200 Sobic006G275200--Sobic003G367200 Sobic006G275200--Sobic001G317000 Sobic006G275200--Sobic001G038900 Sobic001G119400--Sobic009G183400 Sobic001G119400--Sobic001G423800 Sobic001G119400--Sobic002G393000 Sobic001G119400--Sobic009G008900 Sobic009G139400 Sobic009G139400 Sobic001G119400--Sobic009G139400 Sobic001G119400--Sobic001G038900 Sobic001G119400--Sobic006G275200 Sobic006G099900 Sobic006G099900 Sobic001G119400--Sobic006G099900 Sobic003G417800 Sobic003G417800 Sobic001G119400--Sobic003G417800 Sobic002G195400--Sobic007G067600 Sobic001G319700 Sobic001G319700 Sobic002G195400--Sobic001G319700 Sobic003G426100 Sobic003G426100 Sobic002G195400--Sobic003G426100 Sobic007G066932 Sobic007G066932 Sobic002G195400--Sobic007G066932 Sobic010G102300 Sobic010G102300 Sobic002G195400--Sobic010G102300 Sobic003G426000 Sobic003G426000 Sobic002G195400--Sobic003G426000 Sobic007G067350 Sobic007G067350 Sobic002G195400--Sobic007G067350 Sobic002G195400--Sobic001G317000 Sobic004G304300 Sobic004G304300 Sobic002G195400--Sobic004G304300 Sobic001G097600--Sobic009G183400 Sobic001G097600--Sobic006G275200 Sobic002G414600 Sobic002G414600 Sobic001G097600--Sobic002G414600 Sobic001G097600--Sobic001G317000 Sobic001G097600--Sobic003G367200 Sobic001G097600--Sobic001G038900 Sobic001G097600--Sobic001G119400 Sobic004G216600 Sobic004G216600 Sobic001G097600--Sobic004G216600 Sobic001G097600--Sobic008G136400 Sobic002G261000--Sobic001G317000 Sobic002G261000--Sobic006G275200 Sobic002G261000--Sobic001G119400 Sobic002G261000--Sobic004G216600 Sobic002G261000--Sobic009G008900 Sobic002G261000--Sobic001G097600 Sobic001G319600 Sobic001G319600 Sobic002G261000--Sobic001G319600 Sobic003G297600 Sobic003G297600 Sobic002G261000--Sobic003G297600 Sobic002G261000--Sobic001G317200 Sobic001G476500 Sobic001G476500 Sobic009G183400--Sobic001G476500 Sobic009G183400--Sobic001G119400 Sobic006G092500 Sobic006G092500 Sobic009G183400--Sobic006G092500 Sobic009G183400--Sobic001G038900 Sobic009G183400--Sobic001G097600 Sobic009G061200 Sobic009G061200 Sobic009G183400--Sobic009G061200 Sobic009G183400--Sobic002G414600 Sobic004G100700 Sobic004G100700 Sobic009G183400--Sobic004G100700 Sobic001G140900 Sobic001G140900 Sobic009G183400--Sobic001G140900 Sobic001G038900--Sobic002G140400 Sobic001G038900--Sobic001G140900 Sobic001G038900--Sobic008G136400 Sobic008G050600 Sobic008G050600 Sobic001G038900--Sobic008G050600 Sobic001G038900--Sobic001G423800 Sobic009G159400 Sobic009G159400 Sobic001G038900--Sobic009G159400 Sobic003G345100 Sobic003G345100 Sobic001G038900--Sobic003G345100 Sobic001G367600 Sobic001G367600 Sobic001G038900--Sobic001G367600 Sobic001G038900--Sobic004G189400
Octagon: transcription factors


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