Gene annotation
Transcriptome id Sobic.002G104900.1
Synonym Sb02g008930
Functional annotation B12D protein, putative, expressed
UniProt C5X3J1
Pfam PF06522
Panther DB PTHR33417
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G48140 : B12D protein
RAP-DB (Rice) LOC_Os07g17330.1 : B12D protein, putative, expressed
MaizeGDB (Corn) Zm00025a045583 , Zm00025a013642
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.002G104900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G317000 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
2 Sobic.007G145600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@4-Coumarate-CoA ligase(PubMedID : 22313236)@AMP-binding domain containing protein, expressed K01904: 4-coumarate--CoA ligase
3 Sobic.010G178500 Expressed in drought and heat(PubMedID : 29862293)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@endothelial differentiation-related factor 1, putative, expressed K03627: putative transcription factor
4 Sobic.001G015100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pirin, putative, expressed K06911: quercetin 2,3-dioxygenase
5 Sobic.009G141800 cytochrome c, putative, expressed K08738: cytochrome c
6 Sobic.002G140400 plastocyanin-like domain containing protein, putative, expressed -
7 Sobic.004G088551 - -
8 Sobic.003G094200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@alanyl-tRNA synthetase, putative, expressed -
9 Sobic.002G263400 expressed protein -
10 Sobic.010G066601 - -
11 Sobic.008G136400 expressed protein -
12 Sobic.006G173900 glutathione peroxidase, putative, expressed K00432: gpx, btuE, glutathione peroxidase
13 Sobic.001G119100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@plastocyanin-like domain containing protein, putative, expressed -
14 Sobic.008G030100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@chalcone--flavonone isomerase, putative, expressed -
15 Sobic.007G067600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Cupin domain containing protein, expressed -
16 Sobic.004G187900 riboflavin biosynthesis protein ribAB, chloroplast precursor, putative, expressed K14652: 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II
17 Sobic.002G117100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cyclin-dependent kinase G-1, putative, expressed K08818: cell division cycle 2-like
18 Sobic.009G183400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyl hydrolases family 17, putative, expressed -
19 Sobic.004G148000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./middle senescence marker during developmental senescence(PubMedID : 27586543)@Cupin domain containing protein, expressed -
20 Sobic.006G084600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@amino acid permease family protein, putative, expressed -


Gene co-expression network
sample Sobic002G104900 Sobic002G104900 Sobic001G317000 Sobic001G317000 Sobic002G104900--Sobic001G317000 Sobic007G145600 Sobic007G145600 Sobic002G104900--Sobic007G145600 Sobic010G178500 Sobic010G178500 Sobic002G104900--Sobic010G178500 Sobic001G015100 Sobic001G015100 Sobic002G104900--Sobic001G015100 Sobic009G141800 Sobic009G141800 Sobic002G104900--Sobic009G141800 Sobic002G140400 Sobic002G140400 Sobic002G104900--Sobic002G140400 Sobic004G088551 Sobic004G088551 Sobic002G104900--Sobic004G088551 Sobic003G094200 Sobic003G094200 Sobic002G104900--Sobic003G094200 Sobic002G263400 Sobic002G263400 Sobic002G104900--Sobic002G263400 Sobic001G317000--Sobic004G088551 Sobic001G423800 Sobic001G423800 Sobic001G317000--Sobic001G423800 Sobic006G275200 Sobic006G275200 Sobic001G317000--Sobic006G275200 Sobic001G119400 Sobic001G119400 Sobic001G317000--Sobic001G119400 Sobic002G195400 Sobic002G195400 Sobic001G317000--Sobic002G195400 Sobic001G097600 Sobic001G097600 Sobic001G317000--Sobic001G097600 Sobic002G261000 Sobic002G261000 Sobic001G317000--Sobic002G261000 Sobic009G183400 Sobic009G183400 Sobic001G317000--Sobic009G183400 Sobic001G038900 Sobic001G038900 Sobic001G317000--Sobic001G038900 Sobic001G317200 Sobic001G317200 Sobic007G145600--Sobic001G317200 Sobic010G239300 Sobic010G239300 Sobic007G145600--Sobic010G239300 Sobic001G339700 Sobic001G339700 Sobic007G145600--Sobic001G339700 Sobic001G119100 Sobic001G119100 Sobic007G145600--Sobic001G119100 Sobic007G145600--Sobic002G104900 Sobic010G084400 Sobic010G084400 Sobic007G145600--Sobic010G084400 Sobic007G145600--Sobic010G178500 Sobic001G252300 Sobic001G252300 Sobic007G145600--Sobic001G252300 Sobic003G252800 Sobic003G252800 Sobic007G145600--Sobic003G252800 Sobic010G178500--Sobic001G317000 Sobic010G178500--Sobic002G140400 Sobic010G178500--Sobic002G104900 Sobic010G178500--Sobic007G145600 Sobic001G124600 Sobic001G124600 Sobic010G178500--Sobic001G124600 Sobic010G178500--Sobic003G094200 Sobic004G189400 Sobic004G189400 Sobic010G178500--Sobic004G189400 Sobic010G178500--Sobic001G423800 Sobic010G178500--Sobic002G263400 Sobic001G015100--Sobic002G140400 Sobic004G187900 Sobic004G187900 Sobic001G015100--Sobic004G187900 Sobic003G430400 Sobic003G430400 Sobic001G015100--Sobic003G430400 Sobic007G155200 Sobic007G155200 Sobic001G015100--Sobic007G155200 Sobic001G015100--Sobic001G124600 Sobic001G015100--Sobic001G423800 Sobic010G238600 Sobic010G238600 Sobic001G015100--Sobic010G238600 Sobic001G015100--Sobic001G038900 Sobic002G211900 Sobic002G211900 Sobic001G015100--Sobic002G211900 Sobic006G267200 Sobic006G267200 Sobic009G141800--Sobic006G267200 Sobic010G086200 Sobic010G086200 Sobic009G141800--Sobic010G086200 Sobic003G393900 Sobic003G393900 Sobic009G141800--Sobic003G393900 Sobic004G065500 Sobic004G065500 Sobic009G141800--Sobic004G065500 Sobic009G141800--Sobic004G187900 Sobic001G281400 Sobic001G281400 Sobic009G141800--Sobic001G281400 Sobic009G008900 Sobic009G008900 Sobic009G141800--Sobic009G008900 Sobic003G387000 Sobic003G387000 Sobic009G141800--Sobic003G387000 Sobic001G459800 Sobic001G459800 Sobic009G141800--Sobic001G459800 Sobic002G140400--Sobic001G038900 Sobic002G140400--Sobic002G263400 Sobic002G140400--Sobic004G189400 Sobic002G140400--Sobic001G423800 Sobic008G136400 Sobic008G136400 Sobic002G140400--Sobic008G136400 Sobic007G074000 Sobic007G074000 Sobic002G140400--Sobic007G074000 Sobic004G237800 Sobic004G237800 Sobic002G140400--Sobic004G237800 Sobic008G050600 Sobic008G050600 Sobic002G140400--Sobic008G050600 Sobic003G286600 Sobic003G286600 Sobic002G140400--Sobic003G286600 Sobic004G088551--Sobic001G317000 Sobic004G088551--Sobic002G195400 Sobic005G101800 Sobic005G101800 Sobic004G088551--Sobic005G101800 Sobic007G067600 Sobic007G067600 Sobic004G088551--Sobic007G067600 Sobic010G117900 Sobic010G117900 Sobic004G088551--Sobic010G117900 Sobic004G088551--Sobic001G317200 Sobic004G088551--Sobic001G423800 Sobic007G061300 Sobic007G061300 Sobic004G088551--Sobic007G061300 Sobic004G112300 Sobic004G112300 Sobic004G088551--Sobic004G112300 Sobic001G424200 Sobic001G424200 Sobic003G094200--Sobic001G424200 Sobic003G094200--Sobic010G178500 Sobic003G094200--Sobic002G104900 Sobic003G094200--Sobic009G141800 Sobic003G094200--Sobic001G124600 Sobic003G094200--Sobic001G015100 Sobic006G131400 Sobic006G131400 Sobic003G094200--Sobic006G131400 Sobic009G217000 Sobic009G217000 Sobic003G094200--Sobic009G217000 Sobic004G036600 Sobic004G036600 Sobic003G094200--Sobic004G036600 Sobic002G263400--Sobic002G140400 Sobic002G263400--Sobic004G189400 Sobic003G282901 Sobic003G282901 Sobic002G263400--Sobic003G282901 Sobic004G243100 Sobic004G243100 Sobic002G263400--Sobic004G243100 Sobic001G018300 Sobic001G018300 Sobic002G263400--Sobic001G018300 Sobic002G263400--Sobic001G423800 Sobic002G192000 Sobic002G192000 Sobic002G263400--Sobic002G192000 Sobic001G231400 Sobic001G231400 Sobic002G263400--Sobic001G231400 Sobic003G322900 Sobic003G322900 Sobic002G263400--Sobic003G322900
Octagon: transcription factors


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