Gene annotation
Transcriptome id Sobic.001G015100.2,Sobic.001G015100.4,Sobic.001G015100.3
Synonym Sb01g001470
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
pirin, putative, expressed
UniProt A0A1B6QGV4 , A0A1B6QGV2 , A0A1Z5S3X7
Pfam PF02678 PF05726
Panther DB PTHR13903 PTHR13903:SF5
NCBI CDD -
KEGG Orthology K06911; quercetin 2,3-dioxygenase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G43120 : RmlC-like cupins superfamily protein
RAP-DB (Rice) LOC_Os03g62790.2,LOC_Os03g62790.1 : pirin, putative, expressed
MaizeGDB (Corn) Zm00025a009010 , Zm00025a035595
Brachypodium KQK12151 , KQK12152
Barley HORVU5Hr1G092220.4 , HORVU5Hr1G092220.5 , HORVU5Hr1G092220.1 , HORVU5Hr1G092220.2 , HORVU5Hr1G092220.3 , HORVU5Hr1G072760.3 , HORVU5Hr1G072760.2 , HORVU5Hr1G072760.1 , HORVU5Hr1G072760.7 , HORVU5Hr1G072760.6 , HORVU5Hr1G072760.5 , HORVU5Hr1G072760.4 , HORVU5Hr1G120780.5 , HORVU5Hr1G120780.4 , HORVU5Hr1G120780.6 , HORVU5Hr1G120780.1 , HORVU5Hr1G120780.3 , HORVU5Hr1G120780.2 , HORVU5Hr1G120790.8 , HORVU5Hr1G120790.9 , HORVU5Hr1G120790.6 , HORVU5Hr1G120790.7 , HORVU5Hr1G120790.4 , HORVU5Hr1G120790.5 , HORVU5Hr1G120790.2 , HORVU5Hr1G120790.3 , HORVU5Hr1G120790.1 , HORVU5Hr1G120810.1 , HORVU5Hr1G120810.2 , HORVU5Hr1G120800.8 , HORVU5Hr1G120800.6 , HORVU5Hr1G120800.7 , HORVU5Hr1G120800.4 , HORVU5Hr1G120800.5 , HORVU5Hr1G120800.2 , HORVU5Hr1G120800.3 , HORVU5Hr1G120800.1
Wheat TraesCS5B02G535700 , TraesCS5B02G535700 , TraesCS5B02G535700 , TraesCS4A02G335900 , TraesCS5B02G536000 , TraesCS5A02G262700 , TraesCS5B02G536000 , TraesCS5D02G270300 , TraesCS5D02G533400 , TraesCS5B02G261100 , TraesCS5D02G533500 , TraesCS5D02G533200 , TraesCS5B02G535900 , TraesCS4A02G336100 , TraesCS4A02G336200 , TraesCS4A02G336000 , TraesCS4A02G336000 , TraesCS4A02G336200
Populus -


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cDNA sequences
Sobic.001G015100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G140400 plastocyanin-like domain containing protein, putative, expressed -
2 Sobic.004G187900 riboflavin biosynthesis protein ribAB, chloroplast precursor, putative, expressed K14652: 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II
3 Sobic.003G430400 OsCML31 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
4 Sobic.007G155200 bifunctional monodehydroascorbate reductase and carbonic anhydrasenectarin-3 precursor, putative, expressed K01674: carbonic anhydrase
5 Sobic.001G124600 - -
6 Sobic.001G423800 DNA binding protein, putative, expressed -
7 Sobic.010G238600 transferase family protein, putative, expressed -
8 Sobic.001G038900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@DUF567 domain containing protein, putative, expressed -
9 Sobic.002G211900 zinc finger, C3HC4 type domain containing protein, expressed K16274: E3 ubiquitin-protein ligase AIP2
10 Sobic.002G104900 B12D protein, putative, expressed -
11 Sobic.002G263400 expressed protein -
12 Sobic.001G317000 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
13 Sobic.003G417350 - -
14 Sobic.002G393000 pyrrolidone-carboxylate peptidase, putative, expressed K01304: pyroglutamyl-peptidase
15 Sobic.004G243100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
16 Sobic.003G334600 NAC domain transcription factor, putative, expressed -
17 Sobic.008G136400 expressed protein -
18 Sobic.003G094200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@alanyl-tRNA synthetase, putative, expressed -
19 Sobic.006G056400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@zinc-finger protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
20 Sobic.002G326100 aspartic proteinase nepenthesin-1 precursor, putative, expressed -


Gene co-expression network
sample Sobic001G015100 Sobic001G015100 Sobic002G140400 Sobic002G140400 Sobic001G015100--Sobic002G140400 Sobic004G187900 Sobic004G187900 Sobic001G015100--Sobic004G187900 Sobic003G430400 Sobic003G430400 Sobic001G015100--Sobic003G430400 Sobic007G155200 Sobic007G155200 Sobic001G015100--Sobic007G155200 Sobic001G124600 Sobic001G124600 Sobic001G015100--Sobic001G124600 Sobic001G423800 Sobic001G423800 Sobic001G015100--Sobic001G423800 Sobic010G238600 Sobic010G238600 Sobic001G015100--Sobic010G238600 Sobic001G038900 Sobic001G038900 Sobic001G015100--Sobic001G038900 Sobic002G211900 Sobic002G211900 Sobic001G015100--Sobic002G211900 Sobic002G140400--Sobic001G038900 Sobic002G263400 Sobic002G263400 Sobic002G140400--Sobic002G263400 Sobic004G189400 Sobic004G189400 Sobic002G140400--Sobic004G189400 Sobic002G140400--Sobic001G423800 Sobic008G136400 Sobic008G136400 Sobic002G140400--Sobic008G136400 Sobic007G074000 Sobic007G074000 Sobic002G140400--Sobic007G074000 Sobic004G237800 Sobic004G237800 Sobic002G140400--Sobic004G237800 Sobic008G050600 Sobic008G050600 Sobic002G140400--Sobic008G050600 Sobic003G286600 Sobic003G286600 Sobic002G140400--Sobic003G286600 Sobic001G281400 Sobic001G281400 Sobic004G187900--Sobic001G281400 Sobic004G187900--Sobic001G124600 Sobic004G187900--Sobic002G140400 Sobic009G141800 Sobic009G141800 Sobic004G187900--Sobic009G141800 Sobic004G321300 Sobic004G321300 Sobic004G187900--Sobic004G321300 Sobic003G350300 Sobic003G350300 Sobic004G187900--Sobic003G350300 Sobic009G008900 Sobic009G008900 Sobic004G187900--Sobic009G008900 Sobic001G477300 Sobic001G477300 Sobic004G187900--Sobic001G477300 Sobic004G187900--Sobic008G136400 Sobic003G430400--Sobic002G263400 Sobic003G430400--Sobic002G140400 Sobic001G040200 Sobic001G040200 Sobic003G430400--Sobic001G040200 Sobic006G066200 Sobic006G066200 Sobic003G430400--Sobic006G066200 Sobic002G140300 Sobic002G140300 Sobic003G430400--Sobic002G140300 Sobic003G430400--Sobic007G074000 Sobic003G092900 Sobic003G092900 Sobic003G430400--Sobic003G092900 Sobic002G356101 Sobic002G356101 Sobic003G430400--Sobic002G356101 Sobic004G222500 Sobic004G222500 Sobic003G430400--Sobic004G222500 Sobic009G224100 Sobic009G224100 Sobic007G155200--Sobic009G224100 Sobic002G184200 Sobic002G184200 Sobic007G155200--Sobic002G184200 Sobic005G045900 Sobic005G045900 Sobic007G155200--Sobic005G045900 Sobic007G155200--Sobic002G140400 Sobic004G037000 Sobic004G037000 Sobic007G155200--Sobic004G037000 Sobic010G196600 Sobic010G196600 Sobic007G155200--Sobic010G196600 Sobic004G228500 Sobic004G228500 Sobic007G155200--Sobic004G228500 Sobic003G349600 Sobic003G349600 Sobic007G155200--Sobic003G349600 Sobic002G139400 Sobic002G139400 Sobic007G155200--Sobic002G139400 Sobic001G124600--Sobic004G187900 Sobic001G124600--Sobic001G477300 Sobic002G393000 Sobic002G393000 Sobic001G124600--Sobic002G393000 Sobic001G124600--Sobic001G038900 Sobic001G124600--Sobic009G008900 Sobic001G124600--Sobic002G140400 Sobic001G124600--Sobic009G141800 Sobic001G119400 Sobic001G119400 Sobic001G124600--Sobic001G119400 Sobic010G086200 Sobic010G086200 Sobic001G124600--Sobic010G086200 Sobic004G243100 Sobic004G243100 Sobic001G423800--Sobic004G243100 Sobic001G423800--Sobic002G140400 Sobic001G423800--Sobic001G038900 Sobic001G423800--Sobic001G119400 Sobic001G018300 Sobic001G018300 Sobic001G423800--Sobic001G018300 Sobic007G155100 Sobic007G155100 Sobic001G423800--Sobic007G155100 Sobic001G423800--Sobic008G136400 Sobic001G423800--Sobic002G393000 Sobic001G423800--Sobic004G189400 Sobic010G238600--Sobic003G430400 Sobic010G238600--Sobic002G140400 Sobic003G334600 Sobic003G334600 Sobic010G238600--Sobic003G334600 Sobic010G238600--Sobic001G015100 Sobic003G364600 Sobic003G364600 Sobic010G238600--Sobic003G364600 Sobic010G238600--Sobic007G155200 Sobic009G036000 Sobic009G036000 Sobic010G238600--Sobic009G036000 Sobic002G333400 Sobic002G333400 Sobic010G238600--Sobic002G333400 Sobic006G056400 Sobic006G056400 Sobic010G238600--Sobic006G056400 Sobic001G038900--Sobic002G140400 Sobic001G140900 Sobic001G140900 Sobic001G038900--Sobic001G140900 Sobic001G038900--Sobic008G136400 Sobic001G038900--Sobic008G050600 Sobic001G038900--Sobic001G423800 Sobic009G159400 Sobic009G159400 Sobic001G038900--Sobic009G159400 Sobic003G345100 Sobic003G345100 Sobic001G038900--Sobic003G345100 Sobic001G367600 Sobic001G367600 Sobic001G038900--Sobic001G367600 Sobic001G038900--Sobic004G189400 Sobic003G249800 Sobic003G249800 Sobic002G211900--Sobic003G249800 Sobic002G211900--Sobic001G015100 Sobic003G181500 Sobic003G181500 Sobic002G211900--Sobic003G181500 Sobic004G177700 Sobic004G177700 Sobic002G211900--Sobic004G177700 Sobic002G046100 Sobic002G046100 Sobic002G211900--Sobic002G046100 Sobic002G211900--Sobic001G477300 Sobic002G312400 Sobic002G312400 Sobic002G211900--Sobic002G312400 Sobic001G095300 Sobic001G095300 Sobic002G211900--Sobic001G095300 Sobic001G308300 Sobic001G308300 Sobic002G211900--Sobic001G308300
Octagon: transcription factors


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