Gene annotation
Transcriptome id Sobic.003G041200.1
Synonym Sb03g003675
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
expressed protein
UniProt A0A1B6Q182
Pfam -
Panther DB PTHR33168 PTHR33168:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G25735 : -
RAP-DB (Rice) LOC_Os01g08670.1 : expressed protein
MaizeGDB (Corn) Zm00025a023156 , Zm00025a056831 , Zm00025a035806
Brachypodium KQK03042
Barley HORVU3Hr1G021320.1
Wheat -
Populus -


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cDNA sequences
Sobic.003G041200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G336600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@nucleoside transporter, putative, expressed K15014: SLC29A1_2_3, solute carrier family 29 (equilibrative nucleoside transporter), member 1/2/3
2 Sobic.007G155000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@bifunctional monodehydroascorbate reductase and carbonic anhydrasenectarin-3 precursor, putative, expressed K01674: carbonic anhydrase
3 Sobic.001G435000 gibberellin receptor GID1L2, putative, expressed -
4 Sobic.009G159400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@universal stress protein domain containing protein, putative, expressed -
5 Sobic.009G234100 WRKY49, expressed -
6 Sobic.004G208700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CHIT1 - Chitinase family protein precursor, expressed K01183: chitinase
7 Sobic.001G038900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@DUF567 domain containing protein, putative, expressed -
8 Sobic.006G158600 short-chain dehydrogenase/reductase, putative, expressed K15095: (+)-neomenthol dehydrogenase
9 Sobic.004G061200 expressed protein -
10 Sobic.002G192000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@AN1-like zinc finger domain containing protein, expressed -
11 Sobic.001G108200 expressed protein -
12 Sobic.004G229800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytokinin-O-glucosyltransferase 2, putative, expressed -
13 Sobic.001G367600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.008G136400 expressed protein -
15 Sobic.002G393000 pyrrolidone-carboxylate peptidase, putative, expressed K01304: pyroglutamyl-peptidase
16 Sobic.002G188900 cytokinin-O-glucosyltransferase 1, putative, expressed -
17 Sobic.001G423800 DNA binding protein, putative, expressed -
18 Sobic.003G286600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@sphingolipid C4-hydroxylase SUR2, putative, expressed K04713: sphinganine C4-monooxygenase
19 Sobic.001G140900 helix-loop-helix DNA-binding protein, putative, expressed -
20 Sobic.002G140400 plastocyanin-like domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic003G041200 Sobic003G041200 Sobic002G336600 Sobic002G336600 Sobic003G041200--Sobic002G336600 Sobic007G155000 Sobic007G155000 Sobic003G041200--Sobic007G155000 Sobic001G435000 Sobic001G435000 Sobic003G041200--Sobic001G435000 Sobic009G159400 Sobic009G159400 Sobic003G041200--Sobic009G159400 Sobic009G234100 Sobic009G234100 Sobic003G041200--Sobic009G234100 Sobic004G208700 Sobic004G208700 Sobic003G041200--Sobic004G208700 Sobic001G038900 Sobic001G038900 Sobic003G041200--Sobic001G038900 Sobic006G158600 Sobic006G158600 Sobic003G041200--Sobic006G158600 Sobic004G061200 Sobic004G061200 Sobic003G041200--Sobic004G061200 Sobic004G237800 Sobic004G237800 Sobic002G336600--Sobic004G237800 Sobic007G074000 Sobic007G074000 Sobic002G336600--Sobic007G074000 Sobic002G336600--Sobic004G208700 Sobic004G229800 Sobic004G229800 Sobic002G336600--Sobic004G229800 Sobic003G369100 Sobic003G369100 Sobic002G336600--Sobic003G369100 Sobic002G336600--Sobic001G435000 Sobic002G140400 Sobic002G140400 Sobic002G336600--Sobic002G140400 Sobic004G141200 Sobic004G141200 Sobic002G336600--Sobic004G141200 Sobic003G345100 Sobic003G345100 Sobic002G336600--Sobic003G345100 Sobic007G155000--Sobic001G435000 Sobic007G155000--Sobic004G208700 Sobic007G155000--Sobic009G234100 Sobic007G155000--Sobic009G159400 Sobic007G155000--Sobic002G140400 Sobic007G155000--Sobic004G229800 Sobic007G155000--Sobic001G038900 Sobic010G066700 Sobic010G066700 Sobic007G155000--Sobic010G066700 Sobic010G259600 Sobic010G259600 Sobic007G155000--Sobic010G259600 Sobic001G435000--Sobic004G208700 Sobic001G435000--Sobic004G229800 Sobic001G435000--Sobic009G159400 Sobic001G435000--Sobic007G155000 Sobic001G435000--Sobic003G345100 Sobic005G063100 Sobic005G063100 Sobic001G435000--Sobic005G063100 Sobic005G099000 Sobic005G099000 Sobic001G435000--Sobic005G099000 Sobic008G050600 Sobic008G050600 Sobic001G435000--Sobic008G050600 Sobic001G140900 Sobic001G140900 Sobic001G435000--Sobic001G140900 Sobic009G159400--Sobic001G038900 Sobic009G159400--Sobic001G435000 Sobic004G321300 Sobic004G321300 Sobic009G159400--Sobic004G321300 Sobic009G159400--Sobic003G345100 Sobic009G159400--Sobic004G208700 Sobic009G159400--Sobic001G140900 Sobic009G159400--Sobic008G050600 Sobic009G159400--Sobic010G259600 Sobic009G159400--Sobic004G237800 Sobic009G234100--Sobic004G208700 Sobic009G234100--Sobic005G063100 Sobic009G234100--Sobic003G345100 Sobic003G286600 Sobic003G286600 Sobic009G234100--Sobic003G286600 Sobic009G234100--Sobic001G435000 Sobic009G234100--Sobic008G050600 Sobic009G234100--Sobic005G099000 Sobic009G234100--Sobic007G155000 Sobic009G234100--Sobic010G259600 Sobic004G208700--Sobic009G234100 Sobic004G208700--Sobic001G435000 Sobic004G208700--Sobic003G345100 Sobic004G208700--Sobic003G286600 Sobic004G208700--Sobic008G050600 Sobic009G164600 Sobic009G164600 Sobic004G208700--Sobic009G164600 Sobic004G208700--Sobic009G159400 Sobic004G208700--Sobic005G063100 Sobic004G208700--Sobic007G155000 Sobic001G038900--Sobic002G140400 Sobic001G038900--Sobic001G140900 Sobic008G136400 Sobic008G136400 Sobic001G038900--Sobic008G136400 Sobic001G038900--Sobic008G050600 Sobic001G423800 Sobic001G423800 Sobic001G038900--Sobic001G423800 Sobic001G038900--Sobic009G159400 Sobic001G038900--Sobic003G345100 Sobic001G367600 Sobic001G367600 Sobic001G038900--Sobic001G367600 Sobic004G189400 Sobic004G189400 Sobic001G038900--Sobic004G189400 Sobic006G158600--Sobic008G136400 Sobic002G192000 Sobic002G192000 Sobic006G158600--Sobic002G192000 Sobic006G158600--Sobic002G140400 Sobic002G333400 Sobic002G333400 Sobic006G158600--Sobic002G333400 Sobic006G056400 Sobic006G056400 Sobic006G158600--Sobic006G056400 Sobic006G158600--Sobic001G038900 Sobic006G158600--Sobic001G423800 Sobic006G158600--Sobic002G336600 Sobic004G243100 Sobic004G243100 Sobic006G158600--Sobic004G243100 Sobic004G061200--Sobic004G321300 Sobic002G393000 Sobic002G393000 Sobic004G061200--Sobic002G393000 Sobic004G061200--Sobic001G038900 Sobic003G393700 Sobic003G393700 Sobic004G061200--Sobic003G393700 Sobic004G061200--Sobic009G159400 Sobic010G086200 Sobic010G086200 Sobic004G061200--Sobic010G086200 Sobic004G061200--Sobic008G136400 Sobic009G143400 Sobic009G143400 Sobic004G061200--Sobic009G143400 Sobic002G046100 Sobic002G046100 Sobic004G061200--Sobic002G046100
Octagon: transcription factors


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