Gene annotation
Transcriptome id Sobic.004G075000.1
Synonym GDU5, Sb04g006200, AtGDU5
Functional annotation expressed protein
UniProt C5XXC7
Pfam -
Panther DB PTHR33228 PTHR33228:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G24762 : glutamine dumper 4
RAP-DB (Rice) LOC_Os02g09850.1 : expressed protein
MaizeGDB (Corn) Zm00025a019411
Brachypodium KQJ93781
Barley HORVU6Hr1G034760.1
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G155000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@bifunctional monodehydroascorbate reductase and carbonic anhydrasenectarin-3 precursor, putative, expressed K01674: carbonic anhydrase
2 Sobic.002G393000 pyrrolidone-carboxylate peptidase, putative, expressed K01304: pyroglutamyl-peptidase
3 Sobic.001G038900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@DUF567 domain containing protein, putative, expressed -
4 Sobic.003G364600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyl hydrolases family 17, putative, expressed -
5 Sobic.004G061200 expressed protein -
6 Sobic.009G159400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@universal stress protein domain containing protein, putative, expressed -
7 Sobic.001G477600 zinc finger protein, putative, expressed -
8 Sobic.006G143400 expressed protein -
9 Sobic.003G393700 zinc finger, RING-type, putative, expressed -
10 Sobic.001G389000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@WRKY55, expressed -
11 Sobic.003G334600 NAC domain transcription factor, putative, expressed -
12 Sobic.001G435000 gibberellin receptor GID1L2, putative, expressed -
13 Sobic.003G041200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.004G208700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CHIT1 - Chitinase family protein precursor, expressed K01183: chitinase
15 Sobic.001G119400 microsomal glutathione S-transferase 3, putative, expressed K00799: GST, glutathione S-transferase
16 Sobic.010G259600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein O-methyltransferase ZRP4 (Os)(PubMedID : 27208977)@transferase family protein, putative, expressed -
17 Sobic.010G086200 GRAM domain containing protein, expressed -
18 Sobic.009G143400 chitin-inducible gibberellin-responsive protein, putative, expressed -
19 Sobic.004G100700 ethylene-responsive transcription factor TINY, putative, expressed K09286: EREBP-like factor
20 Sobic.001G124600 - -


Gene co-expression network
sample Sobic004G075000 Sobic004G075000 Sobic007G155000 Sobic007G155000 Sobic004G075000--Sobic007G155000 Sobic002G393000 Sobic002G393000 Sobic004G075000--Sobic002G393000 Sobic001G038900 Sobic001G038900 Sobic004G075000--Sobic001G038900 Sobic003G364600 Sobic003G364600 Sobic004G075000--Sobic003G364600 Sobic004G061200 Sobic004G061200 Sobic004G075000--Sobic004G061200 Sobic009G159400 Sobic009G159400 Sobic004G075000--Sobic009G159400 Sobic001G477600 Sobic001G477600 Sobic004G075000--Sobic001G477600 Sobic006G143400 Sobic006G143400 Sobic004G075000--Sobic006G143400 Sobic003G393700 Sobic003G393700 Sobic004G075000--Sobic003G393700 Sobic001G435000 Sobic001G435000 Sobic007G155000--Sobic001G435000 Sobic004G208700 Sobic004G208700 Sobic007G155000--Sobic004G208700 Sobic009G234100 Sobic009G234100 Sobic007G155000--Sobic009G234100 Sobic007G155000--Sobic009G159400 Sobic002G140400 Sobic002G140400 Sobic007G155000--Sobic002G140400 Sobic004G229800 Sobic004G229800 Sobic007G155000--Sobic004G229800 Sobic007G155000--Sobic001G038900 Sobic010G066700 Sobic010G066700 Sobic007G155000--Sobic010G066700 Sobic010G259600 Sobic010G259600 Sobic007G155000--Sobic010G259600 Sobic001G119400 Sobic001G119400 Sobic002G393000--Sobic001G119400 Sobic006G275200 Sobic006G275200 Sobic002G393000--Sobic006G275200 Sobic006G173900 Sobic006G173900 Sobic002G393000--Sobic006G173900 Sobic001G423800 Sobic001G423800 Sobic002G393000--Sobic001G423800 Sobic009G008900 Sobic009G008900 Sobic002G393000--Sobic009G008900 Sobic008G136400 Sobic008G136400 Sobic002G393000--Sobic008G136400 Sobic010G099900 Sobic010G099900 Sobic002G393000--Sobic010G099900 Sobic002G414600 Sobic002G414600 Sobic002G393000--Sobic002G414600 Sobic009G183400 Sobic009G183400 Sobic002G393000--Sobic009G183400 Sobic001G038900--Sobic002G140400 Sobic001G140900 Sobic001G140900 Sobic001G038900--Sobic001G140900 Sobic001G038900--Sobic008G136400 Sobic008G050600 Sobic008G050600 Sobic001G038900--Sobic008G050600 Sobic001G038900--Sobic001G423800 Sobic001G038900--Sobic009G159400 Sobic003G345100 Sobic003G345100 Sobic001G038900--Sobic003G345100 Sobic001G367600 Sobic001G367600 Sobic001G038900--Sobic001G367600 Sobic004G189400 Sobic004G189400 Sobic001G038900--Sobic004G189400 Sobic007G074000 Sobic007G074000 Sobic003G364600--Sobic007G074000 Sobic004G141200 Sobic004G141200 Sobic003G364600--Sobic004G141200 Sobic007G036900 Sobic007G036900 Sobic003G364600--Sobic007G036900 Sobic003G369100 Sobic003G369100 Sobic003G364600--Sobic003G369100 Sobic001G308300 Sobic001G308300 Sobic003G364600--Sobic001G308300 Sobic003G364600--Sobic002G140400 Sobic006G158600 Sobic006G158600 Sobic003G364600--Sobic006G158600 Sobic001G391500 Sobic001G391500 Sobic003G364600--Sobic001G391500 Sobic003G339500 Sobic003G339500 Sobic003G364600--Sobic003G339500 Sobic004G321300 Sobic004G321300 Sobic004G061200--Sobic004G321300 Sobic004G061200--Sobic002G393000 Sobic004G061200--Sobic001G038900 Sobic004G061200--Sobic003G393700 Sobic004G061200--Sobic009G159400 Sobic010G086200 Sobic010G086200 Sobic004G061200--Sobic010G086200 Sobic004G061200--Sobic008G136400 Sobic009G143400 Sobic009G143400 Sobic004G061200--Sobic009G143400 Sobic002G046100 Sobic002G046100 Sobic004G061200--Sobic002G046100 Sobic009G159400--Sobic001G038900 Sobic009G159400--Sobic001G435000 Sobic009G159400--Sobic004G321300 Sobic009G159400--Sobic003G345100 Sobic009G159400--Sobic004G208700 Sobic009G159400--Sobic001G140900 Sobic009G159400--Sobic008G050600 Sobic009G159400--Sobic010G259600 Sobic004G237800 Sobic004G237800 Sobic009G159400--Sobic004G237800 Sobic001G138600 Sobic001G138600 Sobic001G477600--Sobic001G138600 Sobic001G112200 Sobic001G112200 Sobic001G477600--Sobic001G112200 Sobic001G477600--Sobic003G369100 Sobic002G336600 Sobic002G336600 Sobic001G477600--Sobic002G336600 Sobic003G382800 Sobic003G382800 Sobic001G477600--Sobic003G382800 Sobic001G477600--Sobic007G074000 Sobic001G477600--Sobic003G345100 Sobic005G099000 Sobic005G099000 Sobic001G477600--Sobic005G099000 Sobic001G477600--Sobic004G141200 Sobic005G005600 Sobic005G005600 Sobic006G143400--Sobic005G005600 Sobic003G041600 Sobic003G041600 Sobic006G143400--Sobic003G041600 Sobic006G143400--Sobic009G159400 Sobic006G143400--Sobic010G259600 Sobic008G185400 Sobic008G185400 Sobic006G143400--Sobic008G185400 Sobic006G143400--Sobic004G075000 Sobic003G364300 Sobic003G364300 Sobic006G143400--Sobic003G364300 Sobic007G166000 Sobic007G166000 Sobic006G143400--Sobic007G166000 Sobic001G449600 Sobic001G449600 Sobic006G143400--Sobic001G449600 Sobic009G077800 Sobic009G077800 Sobic003G393700--Sobic009G077800 Sobic001G070800 Sobic001G070800 Sobic003G393700--Sobic001G070800 Sobic003G393700--Sobic009G234100 Sobic009G139400 Sobic009G139400 Sobic003G393700--Sobic009G139400 Sobic003G393700--Sobic004G321300 Sobic003G297600 Sobic003G297600 Sobic003G393700--Sobic003G297600 Sobic003G393700--Sobic002G393000 Sobic003G393700--Sobic004G061200 Sobic001G177800 Sobic001G177800 Sobic003G393700--Sobic001G177800
Octagon: transcription factors


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