Gene annotation
Transcriptome id Sobic.010G194300.1
Synonym Sb10g024370
Functional annotation VQ domain containing protein, putative, expressed
UniProt C5Z655
Pfam PF05678
Panther DB PTHR33143 PTHR33143:SF10
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G58000 : VQ motif-containing protein
RAP-DB (Rice) LOC_Os06g41450.1 : VQ domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a042114 , Zm00025a051528
Brachypodium PNT75632
Barley HORVU0Hr1G022030.1 , HORVU7Hr1G094210.1
Wheat TraesCS3B02G197900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G246100 one cut domain family member 3, putative, expressed -
2 Sobic.005G080200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Ser/Thr protein phosphatase family protein, putative, expressed -
3 Sobic.004G010300 glycerol-3-phosphate acyltransferase, putative, expressed K13508: glycerol-3-phosphate acyltransferase
4 Sobic.003G285500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@WRKY14, expressed -
5 Sobic.003G296300 WRKY13, expressed -
6 Sobic.003G037500 WRKY107, expressed -
7 Sobic.009G065300 expressed protein -
8 Sobic.006G047000 CBS domain containing membrane protein, putative, expressed -
9 Sobic.010G250600 expressed protein -
10 Sobic.010G075600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
11 Sobic.009G221400 B3 DNA binding domain containing protein, expressed K09287: RAV-like factor
12 Sobic.002G377100 DUF1645 domain containing protein, putative, expressed -
13 Sobic.009G054100 GDSL-like lipase/acylhydrolase, putative, expressed -
14 Sobic.004G195000 heavy metal transport/detoxification protein, putative, expressed -
15 Sobic.010G107100 expressed protein -
16 Sobic.002G328300 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
17 Sobic.006G180100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@transmembrane amino acid transporter protein, putative, expressed K14209: SLC36A, solute carrier family 36 (proton-coupled amino acid transporter)
18 Sobic.003G277500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@methyltransferase, putative, expressed -
19 Sobic.001G454100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transporter family protein, putative, expressed -
20 Sobic.003G192100 expressed protein -


Gene co-expression network
sample Sobic010G194300 Sobic010G194300 Sobic006G246100 Sobic006G246100 Sobic010G194300--Sobic006G246100 Sobic005G080200 Sobic005G080200 Sobic010G194300--Sobic005G080200 Sobic004G010300 Sobic004G010300 Sobic010G194300--Sobic004G010300 Sobic003G285500 Sobic003G285500 Sobic010G194300--Sobic003G285500 Sobic003G296300 Sobic003G296300 Sobic010G194300--Sobic003G296300 Sobic003G037500 Sobic003G037500 Sobic010G194300--Sobic003G037500 Sobic009G065300 Sobic009G065300 Sobic010G194300--Sobic009G065300 Sobic006G047000 Sobic006G047000 Sobic010G194300--Sobic006G047000 Sobic010G250600 Sobic010G250600 Sobic010G194300--Sobic010G250600 Sobic006G246100--Sobic003G296300 Sobic006G246100--Sobic005G080200 Sobic006G246100--Sobic010G194300 Sobic002G319100 Sobic002G319100 Sobic006G246100--Sobic002G319100 Sobic001G345400 Sobic001G345400 Sobic006G246100--Sobic001G345400 Sobic004G114400 Sobic004G114400 Sobic006G246100--Sobic004G114400 Sobic006G246100--Sobic004G010300 Sobic010G194900 Sobic010G194900 Sobic006G246100--Sobic010G194900 Sobic004G195000 Sobic004G195000 Sobic006G246100--Sobic004G195000 Sobic005G080200--Sobic006G246100 Sobic001G432700 Sobic001G432700 Sobic005G080200--Sobic001G432700 Sobic001G192600 Sobic001G192600 Sobic005G080200--Sobic001G192600 Sobic001G195100 Sobic001G195100 Sobic005G080200--Sobic001G195100 Sobic005G080200--Sobic010G194300 Sobic005G080200--Sobic003G037500 Sobic003G417350 Sobic003G417350 Sobic005G080200--Sobic003G417350 Sobic010G075600 Sobic010G075600 Sobic005G080200--Sobic010G075600 Sobic001G319200 Sobic001G319200 Sobic005G080200--Sobic001G319200 Sobic003G277500 Sobic003G277500 Sobic004G010300--Sobic003G277500 Sobic001G536500 Sobic001G536500 Sobic004G010300--Sobic001G536500 Sobic004G010300--Sobic009G065300 Sobic002G070200 Sobic002G070200 Sobic004G010300--Sobic002G070200 Sobic004G186500 Sobic004G186500 Sobic004G010300--Sobic004G186500 Sobic003G162700 Sobic003G162700 Sobic004G010300--Sobic003G162700 Sobic009G230100 Sobic009G230100 Sobic004G010300--Sobic009G230100 Sobic006G044932 Sobic006G044932 Sobic004G010300--Sobic006G044932 Sobic004G010300--Sobic010G194300 Sobic003G285500--Sobic003G037500 Sobic009G221400 Sobic009G221400 Sobic003G285500--Sobic009G221400 Sobic002G353900 Sobic002G353900 Sobic003G285500--Sobic002G353900 Sobic007G155000 Sobic007G155000 Sobic003G285500--Sobic007G155000 Sobic003G041200 Sobic003G041200 Sobic003G285500--Sobic003G041200 Sobic001G367600 Sobic001G367600 Sobic003G285500--Sobic001G367600 Sobic003G192100 Sobic003G192100 Sobic003G285500--Sobic003G192100 Sobic004G101300 Sobic004G101300 Sobic003G285500--Sobic004G101300 Sobic001G231700 Sobic001G231700 Sobic003G285500--Sobic001G231700 Sobic003G296300--Sobic001G345400 Sobic003G296300--Sobic006G246100 Sobic004G101000 Sobic004G101000 Sobic003G296300--Sobic004G101000 Sobic006G167800 Sobic006G167800 Sobic003G296300--Sobic006G167800 Sobic001G093900 Sobic001G093900 Sobic003G296300--Sobic001G093900 Sobic010G157500 Sobic010G157500 Sobic003G296300--Sobic010G157500 Sobic009G038000 Sobic009G038000 Sobic003G296300--Sobic009G038000 Sobic001G526000 Sobic001G526000 Sobic003G296300--Sobic001G526000 Sobic003G296300--Sobic001G195100 Sobic003G037500--Sobic003G285500 Sobic003G037500--Sobic003G192100 Sobic003G037500--Sobic001G367600 Sobic003G037500--Sobic001G231700 Sobic004G245100 Sobic004G245100 Sobic003G037500--Sobic004G245100 Sobic003G037500--Sobic002G353900 Sobic003G228200 Sobic003G228200 Sobic003G037500--Sobic003G228200 Sobic003G037500--Sobic007G155000 Sobic001G304100 Sobic001G304100 Sobic003G037500--Sobic001G304100 Sobic002G327300 Sobic002G327300 Sobic009G065300--Sobic002G327300 Sobic001G234800 Sobic001G234800 Sobic009G065300--Sobic001G234800 Sobic002G327100 Sobic002G327100 Sobic009G065300--Sobic002G327100 Sobic009G065300--Sobic003G228200 Sobic003G416300 Sobic003G416300 Sobic009G065300--Sobic003G416300 Sobic009G065300--Sobic003G037500 Sobic007G127100 Sobic007G127100 Sobic009G065300--Sobic007G127100 Sobic001G318500 Sobic001G318500 Sobic009G065300--Sobic001G318500 Sobic002G302500 Sobic002G302500 Sobic009G065300--Sobic002G302500 Sobic001G234300 Sobic001G234300 Sobic006G047000--Sobic001G234300 Sobic002G421600 Sobic002G421600 Sobic006G047000--Sobic002G421600 Sobic007G177100 Sobic007G177100 Sobic006G047000--Sobic007G177100 Sobic007G126100 Sobic007G126100 Sobic006G047000--Sobic007G126100 Sobic010G030401 Sobic010G030401 Sobic006G047000--Sobic010G030401 Sobic006G047000--Sobic010G250600 Sobic006G159300 Sobic006G159300 Sobic006G047000--Sobic006G159300 Sobic001G321500 Sobic001G321500 Sobic006G047000--Sobic001G321500 Sobic006G047000--Sobic010G194300 Sobic003G248400 Sobic003G248400 Sobic010G250600--Sobic003G248400 Sobic010G250600--Sobic006G047000 Sobic002G205300 Sobic002G205300 Sobic010G250600--Sobic002G205300 Sobic010G250600--Sobic010G194300 Sobic004G014000 Sobic004G014000 Sobic010G250600--Sobic004G014000 Sobic001G047700 Sobic001G047700 Sobic010G250600--Sobic001G047700 Sobic002G212200 Sobic002G212200 Sobic010G250600--Sobic002G212200 Sobic004G352900 Sobic004G352900 Sobic010G250600--Sobic004G352900 Sobic010G250600--Sobic003G296300
Octagon: transcription factors


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