Gene annotation
Transcriptome id Sobic.009G054100.1
Synonym Sb09g004550
Functional annotation GDSL-like lipase/acylhydrolase, putative, expressed
UniProt C5Z0M7
Pfam PF00657
Panther DB PTHR22835 PTHR22835:SF234
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016788; hydrolase activity, acting on ester bonds


Orthologs (automatic annotation)
TAIR AT1G56670 : GDSL-like Lipase/Acylhydrolase superfamily protein
RAP-DB (Rice) LOC_Os05g06710.1 : GDSL-like lipase/acylhydrolase, putative, expressed
MaizeGDB (Corn) Zm00025a049955 , Zm00025a038023
Brachypodium KQK07951 , KQK07048 , KQK07045 , KQK07046 , KQK07047 , KQK06352 , KQK07360 , KQK15481
Barley HORVU1Hr1G016500.1 , HORVU1Hr1G016500.2 , HORVU7Hr1G025320.1 , HORVU1Hr1G061820.1 , HORVU1Hr1G023510.2 , HORVU1Hr1G023510.3 , HORVU1Hr1G023510.1
Wheat TraesCS7B02G018200 , TraesCS7B02G018200 , TraesCS1D02G250700 , TraesCS1B02G128500 , TraesCS1A02G251100 , TraesCS1D02G054200 , TraesCS1D02G109100 , TraesCS1A02G052300 , TraesCS1A02G105900 , TraesCS1B02G069200 , TraesCS1A02G077000
Populus -


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cDNA sequences
Sobic.009G054100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G195500 reductase, putative, expressed -
2 Sobic.007G157900 gibberellin receptor GID1L2, putative, expressed -
3 Sobic.010G194100 flavonol synthase/flavanone 3-hydroxylase, putative, expressed -
4 Sobic.008G128900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DNA-directed RNA polymerase II subunit RPB9, putative, expressed K03017: RPB9, DNA-directed RNA polymerase II subunit RPB9
5 Sobic.009G130100 CHIT17 - Chitinase family protein precursor, expressed K01183: chitinase
6 Sobic.002G312900 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
7 Sobic.003G280400 hexokinase, putative, expressed K00844: hexokinase
8 Sobic.004G351500 - -
9 Sobic.002G155500 ubiquitin-conjugating enzyme, putative, expressed K06689: UBE2D, UBC4, ubiquitin-conjugating enzyme E2 D
10 Sobic.009G249000 CAMK_CAMK_like.5 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
11 Sobic.007G161400 Mpv17 / PMP22 family domain containing protein, expressed K13347: PXMP2, peroxisomal membrane protein 2
K13348: protein Mpv17
12 Sobic.003G360200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@homeobox domain containing protein, expressed -
13 Sobic.010G194300 VQ domain containing protein, putative, expressed -
14 Sobic.004G262500 lectin-like protein kinase, putative, expressed -
15 Sobic.005G092800 expressed protein -
16 Sobic.001G456100 integral membrane protein, putative, expressed -
17 Sobic.004G269700 oxidoreductase, short chain dehydrogenase/reductase family, putative, expressed K04708: 3-dehydrosphinganine reductase
18 Sobic.006G059700 hydrolase, NUDIX family, domain containing protein, expressed K07766: diphosphoinositol-polyphosphate diphosphatase
19 Sobic.009G238900 dehydrogenase, putative, expressed K00031: IDH1, IDH2, isocitrate dehydrogenase
20 Sobic.009G241700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@oxidoreductase, 2OG-FeII oxygenase domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic009G054100 Sobic009G054100 Sobic010G195500 Sobic010G195500 Sobic009G054100--Sobic010G195500 Sobic007G157900 Sobic007G157900 Sobic009G054100--Sobic007G157900 Sobic010G194100 Sobic010G194100 Sobic009G054100--Sobic010G194100 Sobic008G128900 Sobic008G128900 Sobic009G054100--Sobic008G128900 Sobic009G130100 Sobic009G130100 Sobic009G054100--Sobic009G130100 Sobic002G312900 Sobic002G312900 Sobic009G054100--Sobic002G312900 Sobic003G280400 Sobic003G280400 Sobic009G054100--Sobic003G280400 Sobic004G351500 Sobic004G351500 Sobic009G054100--Sobic004G351500 Sobic002G155500 Sobic002G155500 Sobic009G054100--Sobic002G155500 Sobic005G093000 Sobic005G093000 Sobic010G195500--Sobic005G093000 Sobic010G195500--Sobic002G312900 Sobic002G329000 Sobic002G329000 Sobic010G195500--Sobic002G329000 Sobic010G268400 Sobic010G268400 Sobic010G195500--Sobic010G268400 Sobic010G008400 Sobic010G008400 Sobic010G195500--Sobic010G008400 Sobic001G147900 Sobic001G147900 Sobic010G195500--Sobic001G147900 Sobic004G062500 Sobic004G062500 Sobic010G195500--Sobic004G062500 Sobic010G239500 Sobic010G239500 Sobic010G195500--Sobic010G239500 Sobic004G101300 Sobic004G101300 Sobic010G195500--Sobic004G101300 Sobic009G238900 Sobic009G238900 Sobic007G157900--Sobic009G238900 Sobic007G157900--Sobic004G351500 Sobic007G157900--Sobic010G194100 Sobic002G232700 Sobic002G232700 Sobic007G157900--Sobic002G232700 Sobic007G157900--Sobic009G054100 Sobic003G417100 Sobic003G417100 Sobic007G157900--Sobic003G417100 Sobic007G157900--Sobic004G062500 Sobic004G262500 Sobic004G262500 Sobic007G157900--Sobic004G262500 Sobic007G127100 Sobic007G127100 Sobic007G157900--Sobic007G127100 Sobic010G194100--Sobic003G417100 Sobic006G256900 Sobic006G256900 Sobic010G194100--Sobic006G256900 Sobic006G274933 Sobic006G274933 Sobic010G194100--Sobic006G274933 Sobic002G185800 Sobic002G185800 Sobic010G194100--Sobic002G185800 Sobic010G194100--Sobic004G262500 Sobic003G404600 Sobic003G404600 Sobic010G194100--Sobic003G404600 Sobic001G176400 Sobic001G176400 Sobic010G194100--Sobic001G176400 Sobic010G194100--Sobic003G280400 Sobic006G230300 Sobic006G230300 Sobic010G194100--Sobic006G230300 Sobic008G128900--Sobic002G312900 Sobic007G161400 Sobic007G161400 Sobic008G128900--Sobic007G161400 Sobic003G416300 Sobic003G416300 Sobic008G128900--Sobic003G416300 Sobic001G494000 Sobic001G494000 Sobic008G128900--Sobic001G494000 Sobic005G043000 Sobic005G043000 Sobic008G128900--Sobic005G043000 Sobic008G128900--Sobic007G127100 Sobic003G363800 Sobic003G363800 Sobic008G128900--Sobic003G363800 Sobic008G128900--Sobic010G195500 Sobic008G128900--Sobic003G280400 Sobic009G130100--Sobic004G262500 Sobic003G366600 Sobic003G366600 Sobic009G130100--Sobic003G366600 Sobic009G130100--Sobic003G404600 Sobic003G228200 Sobic003G228200 Sobic009G130100--Sobic003G228200 Sobic009G130100--Sobic003G280400 Sobic006G059700 Sobic006G059700 Sobic009G130100--Sobic006G059700 Sobic006G197100 Sobic006G197100 Sobic009G130100--Sobic006G197100 Sobic010G001000 Sobic010G001000 Sobic009G130100--Sobic010G001000 Sobic004G349125 Sobic004G349125 Sobic009G130100--Sobic004G349125 Sobic004G176600 Sobic004G176600 Sobic002G312900--Sobic004G176600 Sobic002G312900--Sobic008G128900 Sobic002G312900--Sobic010G195500 Sobic002G312900--Sobic005G043000 Sobic002G312900--Sobic003G416300 Sobic002G312900--Sobic006G059700 Sobic002G312900--Sobic003G366600 Sobic002G312900--Sobic001G147900 Sobic005G084600 Sobic005G084600 Sobic002G312900--Sobic005G084600 Sobic003G280400--Sobic007G161400 Sobic003G280400--Sobic006G059700 Sobic010G110800 Sobic010G110800 Sobic003G280400--Sobic010G110800 Sobic007G204700 Sobic007G204700 Sobic003G280400--Sobic007G204700 Sobic010G272300 Sobic010G272300 Sobic003G280400--Sobic010G272300 Sobic001G264000 Sobic001G264000 Sobic003G280400--Sobic001G264000 Sobic005G065900 Sobic005G065900 Sobic003G280400--Sobic005G065900 Sobic003G280400--Sobic006G197100 Sobic003G280400--Sobic006G256900 Sobic001G364500 Sobic001G364500 Sobic004G351500--Sobic001G364500 Sobic001G087900 Sobic001G087900 Sobic004G351500--Sobic001G087900 Sobic004G351500--Sobic002G155500 Sobic001G034700 Sobic001G034700 Sobic004G351500--Sobic001G034700 Sobic009G062000 Sobic009G062000 Sobic004G351500--Sobic009G062000 Sobic004G225500 Sobic004G225500 Sobic004G351500--Sobic004G225500 Sobic001G536500 Sobic001G536500 Sobic004G351500--Sobic001G536500 Sobic002G078400 Sobic002G078400 Sobic004G351500--Sobic002G078400 Sobic008G129400 Sobic008G129400 Sobic004G351500--Sobic008G129400 Sobic002G155500--Sobic004G225500 Sobic010G121300 Sobic010G121300 Sobic002G155500--Sobic010G121300 Sobic002G155500--Sobic004G351500 Sobic007G078100 Sobic007G078100 Sobic002G155500--Sobic007G078100 Sobic004G272800 Sobic004G272800 Sobic002G155500--Sobic004G272800 Sobic001G048832 Sobic001G048832 Sobic002G155500--Sobic001G048832 Sobic004G276100 Sobic004G276100 Sobic002G155500--Sobic004G276100 Sobic002G153500 Sobic002G153500 Sobic002G155500--Sobic002G153500 Sobic002G233100 Sobic002G233100 Sobic002G155500--Sobic002G233100
Octagon: transcription factors


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