Gene annotation
Transcriptome id Sobic.009G241700.2,Sobic.009G241700.1
Synonym Sb09g029340
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
oxidoreductase, 2OG-FeII oxygenase domain containing protein, putative, expressed
UniProt C5YW32
Pfam PF03171
Panther DB PTHR10209 PTHR10209:SF202
NCBI CDD KOG0143; Iron/ascorbate family oxidoreductases
KEGG Orthology -
Gene Ontology GO:0016491; oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT1G52820 : 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
RAP-DB (Rice) LOC_Os05g50090.1 : oxidoreductase, 2OG-FeII oxygenase domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a044673
Brachypodium -
Barley HORVU1Hr1G090870.4 , HORVU1Hr1G090870.3 , HORVU1Hr1G090870.2
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G107100 expressed protein -
2 Sobic.005G211400 cytochrome P450, putative, expressed -
3 Sobic.004G058000 VQ domain containing protein, putative, expressed -
4 Sobic.004G158901 - -
5 Sobic.007G098400 tyrosine protein kinase domain containing protein, putative, expressed -
6 Sobic.001G403700 mitochondrial carrier protein, putative, expressed K15113: SLC25A28_37, solute carrier family 25 (mitochondrial iron transporter), member 28/37
7 Sobic.001G399100 peroxisomal biogenesis factor 11, putative, expressed -
8 Sobic.001G012800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@regulatory protein, putative, expressed -
9 Sobic.009G111600 expressed protein -
10 Sobic.004G145200 membrane attack complex component/perforin/complement C9, putative, expressed -
11 Sobic.002G242500 Expressed in older stem(PubMedID : 28649278)@WRKY90, expressed K18835: WRKY transcription factor 2
12 Sobic.001G206400 fiber protein Fb34, putative, expressed -
13 Sobic.001G074200 LRR receptor-like protein kinase, putative, expressed -
14 Sobic.010G268400 eukaryotic aspartyl protease domain containing protein, expressed -
15 Sobic.004G284500 ORM1, putative, expressed -
16 Sobic.004G232400 VQ domain containing protein, putative, expressed -
17 Sobic.003G019200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
18 Sobic.006G192500 CAMK_CAMK_like.27 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
19 Sobic.009G033700 protein kinase, putative, expressed K13436: pto-interacting protein 1
20 Sobic.010G213400 protein transport protein SEC61 subunit gamma, putative, expressed K07342: SEC61G, SSS1, protein transport protein SEC61 subunit gamma and related proteins


Gene co-expression network
sample Sobic009G241700 Sobic009G241700 Sobic010G107100 Sobic010G107100 Sobic009G241700--Sobic010G107100 Sobic005G211400 Sobic005G211400 Sobic009G241700--Sobic005G211400 Sobic004G058000 Sobic004G058000 Sobic009G241700--Sobic004G058000 Sobic004G158901 Sobic004G158901 Sobic009G241700--Sobic004G158901 Sobic007G098400 Sobic007G098400 Sobic009G241700--Sobic007G098400 Sobic001G403700 Sobic001G403700 Sobic009G241700--Sobic001G403700 Sobic001G399100 Sobic001G399100 Sobic009G241700--Sobic001G399100 Sobic001G012800 Sobic001G012800 Sobic009G241700--Sobic001G012800 Sobic009G111600 Sobic009G111600 Sobic009G241700--Sobic009G111600 Sobic010G107100--Sobic001G399100 Sobic010G107100--Sobic004G058000 Sobic005G229700 Sobic005G229700 Sobic010G107100--Sobic005G229700 Sobic009G200700 Sobic009G200700 Sobic010G107100--Sobic009G200700 Sobic003G192100 Sobic003G192100 Sobic010G107100--Sobic003G192100 Sobic009G143400 Sobic009G143400 Sobic010G107100--Sobic009G143400 Sobic002G423300 Sobic002G423300 Sobic010G107100--Sobic002G423300 Sobic010G107100--Sobic009G241700 Sobic006G230500 Sobic006G230500 Sobic010G107100--Sobic006G230500 Sobic005G211400--Sobic009G241700 Sobic005G211400--Sobic007G098400 Sobic002G242500 Sobic002G242500 Sobic005G211400--Sobic002G242500 Sobic003G294400 Sobic003G294400 Sobic005G211400--Sobic003G294400 Sobic004G232400 Sobic004G232400 Sobic005G211400--Sobic004G232400 Sobic004G145200 Sobic004G145200 Sobic005G211400--Sobic004G145200 Sobic006G076201 Sobic006G076201 Sobic005G211400--Sobic006G076201 Sobic001G090000 Sobic001G090000 Sobic005G211400--Sobic001G090000 Sobic005G211400--Sobic001G403700 Sobic004G058000--Sobic010G107100 Sobic004G058000--Sobic001G399100 Sobic005G117400 Sobic005G117400 Sobic004G058000--Sobic005G117400 Sobic010G224200 Sobic010G224200 Sobic004G058000--Sobic010G224200 Sobic004G058000--Sobic009G241700 Sobic004G058000--Sobic004G158901 Sobic003G019200 Sobic003G019200 Sobic004G058000--Sobic003G019200 Sobic004G050000 Sobic004G050000 Sobic004G058000--Sobic004G050000 Sobic002G249000 Sobic002G249000 Sobic004G058000--Sobic002G249000 Sobic002G224100 Sobic002G224100 Sobic004G158901--Sobic002G224100 Sobic004G158901--Sobic005G117400 Sobic004G158901--Sobic004G058000 Sobic004G158901--Sobic009G241700 Sobic006G192500 Sobic006G192500 Sobic004G158901--Sobic006G192500 Sobic004G158901--Sobic001G399100 Sobic002G379866 Sobic002G379866 Sobic004G158901--Sobic002G379866 Sobic007G025700 Sobic007G025700 Sobic004G158901--Sobic007G025700 Sobic010G163000 Sobic010G163000 Sobic004G158901--Sobic010G163000 Sobic007G098400--Sobic002G242500 Sobic007G098400--Sobic005G211400 Sobic007G098400--Sobic009G241700 Sobic001G010400 Sobic001G010400 Sobic007G098400--Sobic001G010400 Sobic001G049200 Sobic001G049200 Sobic007G098400--Sobic001G049200 Sobic001G380400 Sobic001G380400 Sobic007G098400--Sobic001G380400 Sobic007G098400--Sobic001G090000 Sobic003G273700 Sobic003G273700 Sobic007G098400--Sobic003G273700 Sobic002G294200 Sobic002G294200 Sobic007G098400--Sobic002G294200 Sobic001G403700--Sobic009G111600 Sobic004G284500 Sobic004G284500 Sobic001G403700--Sobic004G284500 Sobic002G078400 Sobic002G078400 Sobic001G403700--Sobic002G078400 Sobic006G182100 Sobic006G182100 Sobic001G403700--Sobic006G182100 Sobic002G296300 Sobic002G296300 Sobic001G403700--Sobic002G296300 Sobic003G248600 Sobic003G248600 Sobic001G403700--Sobic003G248600 Sobic008G132800 Sobic008G132800 Sobic001G403700--Sobic008G132800 Sobic002G214900 Sobic002G214900 Sobic001G403700--Sobic002G214900 Sobic010G213400 Sobic010G213400 Sobic001G403700--Sobic010G213400 Sobic009G033700 Sobic009G033700 Sobic001G399100--Sobic009G033700 Sobic009G046600 Sobic009G046600 Sobic001G399100--Sobic009G046600 Sobic001G399100--Sobic010G107100 Sobic004G186500 Sobic004G186500 Sobic001G399100--Sobic004G186500 Sobic001G399100--Sobic003G019200 Sobic001G399100--Sobic009G200700 Sobic005G028700 Sobic005G028700 Sobic001G399100--Sobic005G028700 Sobic001G399100--Sobic005G229700 Sobic010G086200 Sobic010G086200 Sobic001G399100--Sobic010G086200 Sobic002G118600 Sobic002G118600 Sobic001G012800--Sobic002G118600 Sobic001G012800--Sobic004G145200 Sobic001G012800--Sobic009G241700 Sobic009G220200 Sobic009G220200 Sobic001G012800--Sobic009G220200 Sobic007G188100 Sobic007G188100 Sobic001G012800--Sobic007G188100 Sobic004G259500 Sobic004G259500 Sobic001G012800--Sobic004G259500 Sobic001G012800--Sobic003G294400 Sobic002G362900 Sobic002G362900 Sobic001G012800--Sobic002G362900 Sobic007G006600 Sobic007G006600 Sobic001G012800--Sobic007G006600 Sobic009G111600--Sobic004G284500 Sobic009G111600--Sobic001G403700 Sobic004G276100 Sobic004G276100 Sobic009G111600--Sobic004G276100 Sobic008G179500 Sobic008G179500 Sobic009G111600--Sobic008G179500 Sobic002G083266 Sobic002G083266 Sobic009G111600--Sobic002G083266 Sobic003G367451 Sobic003G367451 Sobic009G111600--Sobic003G367451 Sobic009G111600--Sobic010G213400 Sobic004G272800 Sobic004G272800 Sobic009G111600--Sobic004G272800 Sobic009G111600--Sobic001G399100
Octagon: transcription factors


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