Gene annotation
Transcriptome id Sobic.001G074200.1
Synonym Sb01g006710
Functional annotation LRR receptor-like protein kinase, putative, expressed
UniProt C5WZ68
Pfam PF08263 PF07714
Panther DB PTHR27001 PTHR27001:SF210
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT2G16250 : Leucine-rich repeat protein kinase family protein
RAP-DB (Rice) LOC_Os03g56250.1 : LRR receptor-like protein kinase, putative, expressed
MaizeGDB (Corn) Zm00025a008366 , Zm00025a008367
Brachypodium KQK12980 , PNT77113
Barley HORVU5Hr1G098820.1 , HORVU5Hr1G098820.2 , HORVU5Hr1G098820.3 , HORVU5Hr1G098820.4 , HORVU5Hr1G098820.5 , HORVU5Hr1G098820.6 , HORVU5Hr1G098820.7 , HORVU5Hr1G098820.8 , HORVU5Hr1G098820.9 , HORVU5Hr1G098820.10
Wheat TraesCS5B02G412200 , TraesCS5A02G407300 , TraesCS5A02G407300 , TraesCS5D02G417200
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.001G074200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G127000 leucine-rich repeat family protein, putative, expressed -
2 Sobic.007G125900 protein kinase domain containing protein, expressed -
3 Sobic.008G115500 syntaxin, putative, expressed K08486: syntaxin 1B/2/3
4 Sobic.002G379866 - -
5 Sobic.001G147200 DNA-binding protein-like, putative, expressed K10624: E3 ubiquitin-protein ligase RBBP6
6 Sobic.001G157200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@amino acid permease family protein, putative, expressed K03294: basic amino acid/polyamine antiporter, APA family
7 Sobic.005G117400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@transcription factor(PubMedID : 30367619)@WRKY72, expressed -
8 Sobic.002G118600 SNARE domain containing protein, putative, expressed K18211: synaptosomal-associated protein 25
9 Sobic.010G228000 Protein kinase domain containing protein, expressed -
10 Sobic.006G078400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@abscisic stress-ripening, putative, expressed -
11 Sobic.002G083266 - K00326: cytochrome-b5 reductase
12 Sobic.009G241700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@oxidoreductase, 2OG-FeII oxygenase domain containing protein, putative, expressed -
13 Sobic.004G145200 membrane attack complex component/perforin/complement C9, putative, expressed -
14 Sobic.003G019200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
15 Sobic.004G158901 - -
16 Sobic.001G403700 mitochondrial carrier protein, putative, expressed K15113: SLC25A28_37, solute carrier family 25 (mitochondrial iron transporter), member 28/37
17 Sobic.007G169200 EF hand family protein, putative, expressed K13448: calcium-binding protein CML
18 Sobic.009G059700 thioredoxin, putative, expressed K03671: thioredoxin 1
19 Sobic.004G058000 VQ domain containing protein, putative, expressed -
20 Sobic.004G267500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@universal stress protein domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic001G074200 Sobic001G074200 Sobic009G127000 Sobic009G127000 Sobic001G074200--Sobic009G127000 Sobic007G125900 Sobic007G125900 Sobic001G074200--Sobic007G125900 Sobic008G115500 Sobic008G115500 Sobic001G074200--Sobic008G115500 Sobic002G379866 Sobic002G379866 Sobic001G074200--Sobic002G379866 Sobic001G147200 Sobic001G147200 Sobic001G074200--Sobic001G147200 Sobic001G157200 Sobic001G157200 Sobic001G074200--Sobic001G157200 Sobic005G117400 Sobic005G117400 Sobic001G074200--Sobic005G117400 Sobic002G118600 Sobic002G118600 Sobic001G074200--Sobic002G118600 Sobic010G228000 Sobic010G228000 Sobic001G074200--Sobic010G228000 Sobic009G127000--Sobic001G074200 Sobic004G145200 Sobic004G145200 Sobic009G127000--Sobic004G145200 Sobic009G127000--Sobic010G228000 Sobic007G188100 Sobic007G188100 Sobic009G127000--Sobic007G188100 Sobic010G062800 Sobic010G062800 Sobic009G127000--Sobic010G062800 Sobic001G403700 Sobic001G403700 Sobic009G127000--Sobic001G403700 Sobic001G283500 Sobic001G283500 Sobic009G127000--Sobic001G283500 Sobic009G127000--Sobic007G125900 Sobic002G083266 Sobic002G083266 Sobic009G127000--Sobic002G083266 Sobic003G348400 Sobic003G348400 Sobic007G125900--Sobic003G348400 Sobic007G125900--Sobic005G117400 Sobic001G151800 Sobic001G151800 Sobic007G125900--Sobic001G151800 Sobic007G125900--Sobic001G074200 Sobic009G236200 Sobic009G236200 Sobic007G125900--Sobic009G236200 Sobic002G355200 Sobic002G355200 Sobic007G125900--Sobic002G355200 Sobic005G016800 Sobic005G016800 Sobic007G125900--Sobic005G016800 Sobic004G102400 Sobic004G102400 Sobic007G125900--Sobic004G102400 Sobic007G125900--Sobic009G127000 Sobic008G115500--Sobic001G074200 Sobic004G271700 Sobic004G271700 Sobic008G115500--Sobic004G271700 Sobic008G115500--Sobic009G127000 Sobic003G002400 Sobic003G002400 Sobic008G115500--Sobic003G002400 Sobic001G516100 Sobic001G516100 Sobic008G115500--Sobic001G516100 Sobic003G367300 Sobic003G367300 Sobic008G115500--Sobic003G367300 Sobic001G085900 Sobic001G085900 Sobic008G115500--Sobic001G085900 Sobic001G103200 Sobic001G103200 Sobic008G115500--Sobic001G103200 Sobic001G180900 Sobic001G180900 Sobic008G115500--Sobic001G180900 Sobic003G146100 Sobic003G146100 Sobic002G379866--Sobic003G146100 Sobic002G379866--Sobic001G157200 Sobic002G222800 Sobic002G222800 Sobic002G379866--Sobic002G222800 Sobic002G379866--Sobic001G074200 Sobic002G379866--Sobic002G118600 Sobic006G078400 Sobic006G078400 Sobic002G379866--Sobic006G078400 Sobic004G158901 Sobic004G158901 Sobic002G379866--Sobic004G158901 Sobic002G379866--Sobic001G147200 Sobic002G224100 Sobic002G224100 Sobic002G379866--Sobic002G224100 Sobic003G019200 Sobic003G019200 Sobic001G147200--Sobic003G019200 Sobic010G246000 Sobic010G246000 Sobic001G147200--Sobic010G246000 Sobic001G147200--Sobic002G118600 Sobic010G204300 Sobic010G204300 Sobic001G147200--Sobic010G204300 Sobic006G228300 Sobic006G228300 Sobic001G147200--Sobic006G228300 Sobic001G399100 Sobic001G399100 Sobic001G147200--Sobic001G399100 Sobic001G538866 Sobic001G538866 Sobic001G147200--Sobic001G538866 Sobic002G374100 Sobic002G374100 Sobic001G147200--Sobic002G374100 Sobic006G263100 Sobic006G263100 Sobic001G147200--Sobic006G263100 Sobic001G157200--Sobic002G379866 Sobic001G157200--Sobic002G222800 Sobic001G157200--Sobic001G074200 Sobic001G157200--Sobic005G117400 Sobic001G157200--Sobic004G158901 Sobic004G058000 Sobic004G058000 Sobic001G157200--Sobic004G058000 Sobic001G157200--Sobic007G125900 Sobic005G105300 Sobic005G105300 Sobic001G157200--Sobic005G105300 Sobic004G067200 Sobic004G067200 Sobic001G157200--Sobic004G067200 Sobic005G117400--Sobic004G158901 Sobic005G117400--Sobic007G125900 Sobic005G117400--Sobic004G058000 Sobic002G249000 Sobic002G249000 Sobic005G117400--Sobic002G249000 Sobic005G117400--Sobic003G348400 Sobic004G050000 Sobic004G050000 Sobic005G117400--Sobic004G050000 Sobic003G232900 Sobic003G232900 Sobic005G117400--Sobic003G232900 Sobic007G025700 Sobic007G025700 Sobic005G117400--Sobic007G025700 Sobic010G224200 Sobic010G224200 Sobic005G117400--Sobic010G224200 Sobic002G118600--Sobic001G147200 Sobic001G341600 Sobic001G341600 Sobic002G118600--Sobic001G341600 Sobic003G341100 Sobic003G341100 Sobic002G118600--Sobic003G341100 Sobic002G118600--Sobic010G228000 Sobic002G118600--Sobic002G374100 Sobic001G290400 Sobic001G290400 Sobic002G118600--Sobic001G290400 Sobic007G011000 Sobic007G011000 Sobic002G118600--Sobic007G011000 Sobic002G118600--Sobic001G538866 Sobic002G118600--Sobic006G228300 Sobic010G228000--Sobic002G374100 Sobic010G228000--Sobic002G118600 Sobic010G228000--Sobic007G188100 Sobic002G294700 Sobic002G294700 Sobic010G228000--Sobic002G294700 Sobic002G330300 Sobic002G330300 Sobic010G228000--Sobic002G330300 Sobic004G280800 Sobic004G280800 Sobic010G228000--Sobic004G280800 Sobic010G228000--Sobic010G246000 Sobic002G379400 Sobic002G379400 Sobic010G228000--Sobic002G379400 Sobic010G228000--Sobic001G290400
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.