Gene annotation
Transcriptome id Sobic.004G145200.2,Sobic.004G145200.1
Synonym Sb04g018940
Functional annotation membrane attack complex component/perforin/complement C9, putative, expressed
UniProt C5XRP9 , A0A1Z5RNI2
Pfam PF01823
Panther DB PTHR33199 PTHR33199:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G14780 : MAC/Perforin domain-containing protein
RAP-DB (Rice) LOC_Os02g27480.1 : membrane attack complex component/perforin/complement C9, putative, expressed
MaizeGDB (Corn) Zm00025a031282 , Zm00025a020328
Brachypodium KQJ99480 , PNT68628
Barley HORVU0Hr1G016050.9 , HORVU0Hr1G016050.2 , HORVU0Hr1G016050.3 , HORVU0Hr1G016050.1 , HORVU0Hr1G016050.6 , HORVU0Hr1G016050.7 , HORVU0Hr1G016050.4 , HORVU0Hr1G016050.5 , HORVU0Hr1G016050.8 , HORVU0Hr1G016050.10 , HORVU0Hr1G016050.11
Wheat TraesCS6B02G234200 , TraesCS6A02G188400 , TraesCS6D02G177100
Populus -


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cDNA sequences
Sobic.004G145200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G228000 Protein kinase domain containing protein, expressed -
2 Sobic.008G016900 glucosamine--fructose-6-phosphate aminotransferase 1, putative, expressed K00820: glmS, glutamine---fructose-6-phosphate transaminase (isomerizing)
3 Sobic.007G188100 Candidate orthologue to the wheat Pm40 gene(PubMedID : 27755575)@protein kinase domain containing protein, expressed K13429: chitin elicitor receptor kinase 1
4 Sobic.006G076201 - -
5 Sobic.010G062800 transporter, major facilitator family, putative, expressed K13783: MFS transporter, OPA family, solute carrier family 37 (glycerol-3-phosphate transporter), member 1/2
6 Sobic.002G362900 IBS1, putative, expressed -
7 Sobic.001G012800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@regulatory protein, putative, expressed -
8 Sobic.002G242500 Expressed in older stem(PubMedID : 28649278)@WRKY90, expressed K18835: WRKY transcription factor 2
9 Sobic.002G118600 SNARE domain containing protein, putative, expressed K18211: synaptosomal-associated protein 25
10 Sobic.009G127000 leucine-rich repeat family protein, putative, expressed -
11 Sobic.002G379400 CAMK_CAMK_like.7 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K14498: serine/threonine-protein kinase SRK2
12 Sobic.001G403600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@DUF538 domain containing protein, putative, expressed -
13 Sobic.001G283500 VHS and GAT domain containing protein, expressed -
14 Sobic.002G330300 chitin-inducible gibberellin-responsive protein, putative, expressed -
15 Sobic.010G236500 LTPL85 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
16 Sobic.001G403700 mitochondrial carrier protein, putative, expressed K15113: SLC25A28_37, solute carrier family 25 (mitochondrial iron transporter), member 28/37
17 Sobic.003G338900 expressed protein -
18 Sobic.009G241700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@oxidoreductase, 2OG-FeII oxygenase domain containing protein, putative, expressed -
19 Sobic.003G049300 expressed protein -
20 Sobic.006G263100 expressed protein -


Gene co-expression network
sample Sobic004G145200 Sobic004G145200 Sobic010G228000 Sobic010G228000 Sobic004G145200--Sobic010G228000 Sobic008G016900 Sobic008G016900 Sobic004G145200--Sobic008G016900 Sobic007G188100 Sobic007G188100 Sobic004G145200--Sobic007G188100 Sobic006G076201 Sobic006G076201 Sobic004G145200--Sobic006G076201 Sobic010G062800 Sobic010G062800 Sobic004G145200--Sobic010G062800 Sobic002G362900 Sobic002G362900 Sobic004G145200--Sobic002G362900 Sobic001G012800 Sobic001G012800 Sobic004G145200--Sobic001G012800 Sobic002G242500 Sobic002G242500 Sobic004G145200--Sobic002G242500 Sobic002G118600 Sobic002G118600 Sobic004G145200--Sobic002G118600 Sobic002G374100 Sobic002G374100 Sobic010G228000--Sobic002G374100 Sobic010G228000--Sobic002G118600 Sobic010G228000--Sobic007G188100 Sobic002G294700 Sobic002G294700 Sobic010G228000--Sobic002G294700 Sobic002G330300 Sobic002G330300 Sobic010G228000--Sobic002G330300 Sobic004G280800 Sobic004G280800 Sobic010G228000--Sobic004G280800 Sobic010G246000 Sobic010G246000 Sobic010G228000--Sobic010G246000 Sobic002G379400 Sobic002G379400 Sobic010G228000--Sobic002G379400 Sobic001G290400 Sobic001G290400 Sobic010G228000--Sobic001G290400 Sobic008G016900--Sobic002G330300 Sobic008G016900--Sobic002G379400 Sobic008G016900--Sobic010G062800 Sobic001G283500 Sobic001G283500 Sobic008G016900--Sobic001G283500 Sobic008G016900--Sobic007G188100 Sobic008G016900--Sobic004G145200 Sobic001G162100 Sobic001G162100 Sobic008G016900--Sobic001G162100 Sobic009G059700 Sobic009G059700 Sobic008G016900--Sobic009G059700 Sobic002G343500 Sobic002G343500 Sobic008G016900--Sobic002G343500 Sobic007G188100--Sobic010G228000 Sobic007G188100--Sobic002G362900 Sobic002G353400 Sobic002G353400 Sobic007G188100--Sobic002G353400 Sobic007G188100--Sobic002G374100 Sobic004G259500 Sobic004G259500 Sobic007G188100--Sobic004G259500 Sobic007G188100--Sobic008G016900 Sobic007G188100--Sobic002G330300 Sobic007G188100--Sobic010G062800 Sobic007G188100--Sobic002G118600 Sobic006G087900 Sobic006G087900 Sobic006G076201--Sobic006G087900 Sobic006G076201--Sobic004G145200 Sobic002G325900 Sobic002G325900 Sobic006G076201--Sobic002G325900 Sobic010G236500 Sobic010G236500 Sobic006G076201--Sobic010G236500 Sobic005G195600 Sobic005G195600 Sobic006G076201--Sobic005G195600 Sobic006G191100 Sobic006G191100 Sobic006G076201--Sobic006G191100 Sobic003G016600 Sobic003G016600 Sobic006G076201--Sobic003G016600 Sobic006G076201--Sobic002G242500 Sobic006G076201--Sobic002G362900 Sobic010G062800--Sobic008G016900 Sobic010G062800--Sobic007G188100 Sobic001G403700 Sobic001G403700 Sobic010G062800--Sobic001G403700 Sobic006G192500 Sobic006G192500 Sobic010G062800--Sobic006G192500 Sobic010G062800--Sobic010G228000 Sobic010G062800--Sobic001G283500 Sobic002G214900 Sobic002G214900 Sobic010G062800--Sobic002G214900 Sobic010G062800--Sobic004G145200 Sobic006G182100 Sobic006G182100 Sobic010G062800--Sobic006G182100 Sobic002G362900--Sobic007G188100 Sobic002G362900--Sobic006G087900 Sobic009G220200 Sobic009G220200 Sobic002G362900--Sobic009G220200 Sobic009G208800 Sobic009G208800 Sobic002G362900--Sobic009G208800 Sobic002G362900--Sobic004G145200 Sobic005G231700 Sobic005G231700 Sobic002G362900--Sobic005G231700 Sobic002G362900--Sobic008G016900 Sobic002G362900--Sobic010G228000 Sobic001G409900 Sobic001G409900 Sobic002G362900--Sobic001G409900 Sobic001G012800--Sobic002G118600 Sobic001G012800--Sobic004G145200 Sobic009G241700 Sobic009G241700 Sobic001G012800--Sobic009G241700 Sobic001G012800--Sobic009G220200 Sobic001G012800--Sobic007G188100 Sobic001G012800--Sobic004G259500 Sobic003G294400 Sobic003G294400 Sobic001G012800--Sobic003G294400 Sobic001G012800--Sobic002G362900 Sobic007G006600 Sobic007G006600 Sobic001G012800--Sobic007G006600 Sobic002G294200 Sobic002G294200 Sobic002G242500--Sobic002G294200 Sobic007G098400 Sobic007G098400 Sobic002G242500--Sobic007G098400 Sobic002G242500--Sobic004G145200 Sobic003G049300 Sobic003G049300 Sobic002G242500--Sobic003G049300 Sobic001G049200 Sobic001G049200 Sobic002G242500--Sobic001G049200 Sobic003G167500 Sobic003G167500 Sobic002G242500--Sobic003G167500 Sobic007G221100 Sobic007G221100 Sobic002G242500--Sobic007G221100 Sobic002G242500--Sobic001G403700 Sobic005G211400 Sobic005G211400 Sobic002G242500--Sobic005G211400 Sobic001G147200 Sobic001G147200 Sobic002G118600--Sobic001G147200 Sobic001G341600 Sobic001G341600 Sobic002G118600--Sobic001G341600 Sobic003G341100 Sobic003G341100 Sobic002G118600--Sobic003G341100 Sobic002G118600--Sobic010G228000 Sobic002G118600--Sobic002G374100 Sobic002G118600--Sobic001G290400 Sobic007G011000 Sobic007G011000 Sobic002G118600--Sobic007G011000 Sobic001G538866 Sobic001G538866 Sobic002G118600--Sobic001G538866 Sobic006G228300 Sobic006G228300 Sobic002G118600--Sobic006G228300
Octagon: transcription factors


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