Gene annotation
Transcriptome id Sobic.010G062800.1
Synonym Sb10g005430
Functional annotation transporter, major facilitator family, putative, expressed
UniProt C5Z5G2
Pfam PF07690
Panther DB PTHR11662 PTHR11662:SF153
NCBI CDD KOG2533; Permease of the major facilitator superfamily
KEGG Orthology K13783; MFS transporter, OPA family, solute carrier family 37 (glycerol-3-phosphate transporter), member 1/2
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT2G13100 : Major facilitator superfamily protein
RAP-DB (Rice) LOC_Os06g08170.1 : transporter, major facilitator family, putative, expressed
MaizeGDB (Corn) Zm00025a041096
Brachypodium KQK19321
Barley HORVU7Hr1G029420.2 , HORVU7Hr1G029420.3 , HORVU7Hr1G029420.1 , HORVU7Hr1G029420.5
Wheat TraesCS7B02G045900 , TraesCS7D02G145500 , TraesCS7A02G143800
Populus -


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cDNA sequences
Sobic.010G062800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G016900 glucosamine--fructose-6-phosphate aminotransferase 1, putative, expressed K00820: glmS, glutamine---fructose-6-phosphate transaminase (isomerizing)
2 Sobic.007G188100 Candidate orthologue to the wheat Pm40 gene(PubMedID : 27755575)@protein kinase domain containing protein, expressed K13429: chitin elicitor receptor kinase 1
3 Sobic.001G403700 mitochondrial carrier protein, putative, expressed K15113: SLC25A28_37, solute carrier family 25 (mitochondrial iron transporter), member 28/37
4 Sobic.006G192500 CAMK_CAMK_like.27 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
5 Sobic.010G228000 Protein kinase domain containing protein, expressed -
6 Sobic.001G283500 VHS and GAT domain containing protein, expressed -
7 Sobic.002G214900 polygalacturonase, putative, expressed -
8 Sobic.004G145200 membrane attack complex component/perforin/complement C9, putative, expressed -
9 Sobic.006G182100 ORM1, putative, expressed -
10 Sobic.001G162100 WRKY94, expressed -
11 Sobic.010G204300 expressed protein -
12 Sobic.009G249000 CAMK_CAMK_like.5 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
13 Sobic.007G195701 - -
14 Sobic.002G330300 chitin-inducible gibberellin-responsive protein, putative, expressed -
15 Sobic.009G127000 leucine-rich repeat family protein, putative, expressed -
16 Sobic.002G078400 ADP-ribosylation factor, putative, expressed K07937: ADP-ribosylation factor 1/2
K07977: Arf/Sar family, other
17 Sobic.001G434900 serine palmitoyltransferase 1, putative, expressed K00654: serine palmitoyltransferase
18 Sobic.001G147200 DNA-binding protein-like, putative, expressed K10624: E3 ubiquitin-protein ligase RBBP6
19 Sobic.003G368500 Yip1 domain containing protein, expressed -
20 Sobic.009G059700 thioredoxin, putative, expressed K03671: thioredoxin 1


Gene co-expression network
sample Sobic010G062800 Sobic010G062800 Sobic008G016900 Sobic008G016900 Sobic010G062800--Sobic008G016900 Sobic007G188100 Sobic007G188100 Sobic010G062800--Sobic007G188100 Sobic001G403700 Sobic001G403700 Sobic010G062800--Sobic001G403700 Sobic006G192500 Sobic006G192500 Sobic010G062800--Sobic006G192500 Sobic010G228000 Sobic010G228000 Sobic010G062800--Sobic010G228000 Sobic001G283500 Sobic001G283500 Sobic010G062800--Sobic001G283500 Sobic002G214900 Sobic002G214900 Sobic010G062800--Sobic002G214900 Sobic004G145200 Sobic004G145200 Sobic010G062800--Sobic004G145200 Sobic006G182100 Sobic006G182100 Sobic010G062800--Sobic006G182100 Sobic002G330300 Sobic002G330300 Sobic008G016900--Sobic002G330300 Sobic002G379400 Sobic002G379400 Sobic008G016900--Sobic002G379400 Sobic008G016900--Sobic010G062800 Sobic008G016900--Sobic001G283500 Sobic008G016900--Sobic007G188100 Sobic008G016900--Sobic004G145200 Sobic001G162100 Sobic001G162100 Sobic008G016900--Sobic001G162100 Sobic009G059700 Sobic009G059700 Sobic008G016900--Sobic009G059700 Sobic002G343500 Sobic002G343500 Sobic008G016900--Sobic002G343500 Sobic007G188100--Sobic010G228000 Sobic002G362900 Sobic002G362900 Sobic007G188100--Sobic002G362900 Sobic002G353400 Sobic002G353400 Sobic007G188100--Sobic002G353400 Sobic002G374100 Sobic002G374100 Sobic007G188100--Sobic002G374100 Sobic004G259500 Sobic004G259500 Sobic007G188100--Sobic004G259500 Sobic007G188100--Sobic008G016900 Sobic007G188100--Sobic002G330300 Sobic007G188100--Sobic010G062800 Sobic002G118600 Sobic002G118600 Sobic007G188100--Sobic002G118600 Sobic009G111600 Sobic009G111600 Sobic001G403700--Sobic009G111600 Sobic004G284500 Sobic004G284500 Sobic001G403700--Sobic004G284500 Sobic002G078400 Sobic002G078400 Sobic001G403700--Sobic002G078400 Sobic001G403700--Sobic006G182100 Sobic002G296300 Sobic002G296300 Sobic001G403700--Sobic002G296300 Sobic003G248600 Sobic003G248600 Sobic001G403700--Sobic003G248600 Sobic008G132800 Sobic008G132800 Sobic001G403700--Sobic008G132800 Sobic001G403700--Sobic002G214900 Sobic010G213400 Sobic010G213400 Sobic001G403700--Sobic010G213400 Sobic001G399100 Sobic001G399100 Sobic006G192500--Sobic001G399100 Sobic005G228000 Sobic005G228000 Sobic006G192500--Sobic005G228000 Sobic006G192500--Sobic002G374100 Sobic006G192500--Sobic010G062800 Sobic001G206400 Sobic001G206400 Sobic006G192500--Sobic001G206400 Sobic010G204300 Sobic010G204300 Sobic006G192500--Sobic010G204300 Sobic001G147200 Sobic001G147200 Sobic006G192500--Sobic001G147200 Sobic002G245800 Sobic002G245800 Sobic006G192500--Sobic002G245800 Sobic010G107100 Sobic010G107100 Sobic006G192500--Sobic010G107100 Sobic010G228000--Sobic002G374100 Sobic010G228000--Sobic002G118600 Sobic010G228000--Sobic007G188100 Sobic002G294700 Sobic002G294700 Sobic010G228000--Sobic002G294700 Sobic010G228000--Sobic002G330300 Sobic004G280800 Sobic004G280800 Sobic010G228000--Sobic004G280800 Sobic010G246000 Sobic010G246000 Sobic010G228000--Sobic010G246000 Sobic010G228000--Sobic002G379400 Sobic001G290400 Sobic001G290400 Sobic010G228000--Sobic001G290400 Sobic001G283500--Sobic008G016900 Sobic007G195701 Sobic007G195701 Sobic001G283500--Sobic007G195701 Sobic001G283500--Sobic001G403700 Sobic003G115800 Sobic003G115800 Sobic001G283500--Sobic003G115800 Sobic009G160200 Sobic009G160200 Sobic001G283500--Sobic009G160200 Sobic001G283500--Sobic010G204300 Sobic001G283500--Sobic002G296300 Sobic001G283500--Sobic010G062800 Sobic010G188100 Sobic010G188100 Sobic001G283500--Sobic010G188100 Sobic007G114200 Sobic007G114200 Sobic002G214900--Sobic007G114200 Sobic002G214900--Sobic006G182100 Sobic001G409900 Sobic001G409900 Sobic002G214900--Sobic001G409900 Sobic003G368500 Sobic003G368500 Sobic002G214900--Sobic003G368500 Sobic007G115100 Sobic007G115100 Sobic002G214900--Sobic007G115100 Sobic002G214900--Sobic001G403700 Sobic001G224400 Sobic001G224400 Sobic002G214900--Sobic001G224400 Sobic002G214900--Sobic007G195701 Sobic003G362400 Sobic003G362400 Sobic002G214900--Sobic003G362400 Sobic004G145200--Sobic010G228000 Sobic004G145200--Sobic008G016900 Sobic004G145200--Sobic007G188100 Sobic006G076201 Sobic006G076201 Sobic004G145200--Sobic006G076201 Sobic004G145200--Sobic010G062800 Sobic004G145200--Sobic002G362900 Sobic001G012800 Sobic001G012800 Sobic004G145200--Sobic001G012800 Sobic002G242500 Sobic002G242500 Sobic004G145200--Sobic002G242500 Sobic004G145200--Sobic002G118600 Sobic006G182100--Sobic004G284500 Sobic009G033700 Sobic009G033700 Sobic006G182100--Sobic009G033700 Sobic002G046100 Sobic002G046100 Sobic006G182100--Sobic002G046100 Sobic010G018400 Sobic010G018400 Sobic006G182100--Sobic010G018400 Sobic004G196300 Sobic004G196300 Sobic006G182100--Sobic004G196300 Sobic001G281400 Sobic001G281400 Sobic006G182100--Sobic001G281400 Sobic008G185400 Sobic008G185400 Sobic006G182100--Sobic008G185400 Sobic006G182100--Sobic003G368500 Sobic001G445800 Sobic001G445800 Sobic006G182100--Sobic001G445800
Octagon: transcription factors


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