Gene annotation
Transcriptome id Sobic.006G182100.1
Synonym Sb06g025660
Functional annotation ORM1, putative, expressed
UniProt C5YE27
Pfam PF04061
Panther DB PTHR12665 PTHR12665:SF14
NCBI CDD KOG3319; Predicted membrane protein
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane GO:0005789endoplasmic reticulum membrane


Orthologs (automatic annotation)
TAIR AT1G01230 : ORMDL family protein
RAP-DB (Rice) LOC_Os02g45180.1 : ORM1, putative, expressed
MaizeGDB (Corn) Zm00025a021489
Brachypodium KQK16428 , KQJ84090 , PNT69223 , PNT69222 , PNT69221 , KQK00736
Barley HORVU2Hr1G095360.2 , HORVU2Hr1G095360.1
Wheat TraesCS3D02G052200 , TraesCS2A02G402300 , TraesCS2D02G399600 , TraesCS6D02G104100 , TraesCS2B02G420500
Populus PNT04008 , PNT04009 , PNT50212 , PNT50213 , PNT04010


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cDNA sequences
Sobic.006G182100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G284500 ORM1, putative, expressed -
2 Sobic.009G033700 protein kinase, putative, expressed K13436: pto-interacting protein 1
3 Sobic.002G046100 zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
4 Sobic.010G018400 expressed protein K02153: ATPeV0E, V-type H+-transporting ATPase subunit e
5 Sobic.004G196300 ras-related protein, putative, expressed K07877: Ras-related protein Rab-2A
6 Sobic.001G281400 expressed protein -
7 Sobic.008G185400 ras-related protein, putative, expressed K07889: Ras-related protein Rab-5C
8 Sobic.003G368500 Yip1 domain containing protein, expressed -
9 Sobic.001G445800 expressed protein -
10 Sobic.003G249800 60S ribosomal protein L18a-1, putative, expressed -
11 Sobic.010G213400 protein transport protein SEC61 subunit gamma, putative, expressed K07342: SEC61G, SSS1, protein transport protein SEC61 subunit gamma and related proteins
12 Sobic.007G195701 - -
13 Sobic.002G078400 ADP-ribosylation factor, putative, expressed K07937: ADP-ribosylation factor 1/2
K07977: Arf/Sar family, other
14 Sobic.001G019900 zinc finger, C3HC4 type domain containing protein, expressed K15707: RING finger protein 170
15 Sobic.004G272800 VHS and GAT domain containing protein, expressed -
16 Sobic.001G403700 mitochondrial carrier protein, putative, expressed K15113: SLC25A28_37, solute carrier family 25 (mitochondrial iron transporter), member 28/37
17 Sobic.001G034700 actin-depolymerizing factor, putative, expressed K05765: cofilin
18 Sobic.006G010600 peptidyl-prolyl cis-trans isomerase, putative, expressed K09578: peptidyl-prolyl cis-trans isomerase NIMA-interacting 1
19 Sobic.003G220600 SNF7 domain containing protein, putative, expressed K12194: CHMP4, SNF7, charged multivesicular body protein 4
20 Sobic.002G202300 vesicle transport v-SNARE protein, putative, expressed K08495: GOSR1, golgi SNAP receptor complex member 1


Gene co-expression network
sample Sobic006G182100 Sobic006G182100 Sobic004G284500 Sobic004G284500 Sobic006G182100--Sobic004G284500 Sobic009G033700 Sobic009G033700 Sobic006G182100--Sobic009G033700 Sobic002G046100 Sobic002G046100 Sobic006G182100--Sobic002G046100 Sobic010G018400 Sobic010G018400 Sobic006G182100--Sobic010G018400 Sobic004G196300 Sobic004G196300 Sobic006G182100--Sobic004G196300 Sobic001G281400 Sobic001G281400 Sobic006G182100--Sobic001G281400 Sobic008G185400 Sobic008G185400 Sobic006G182100--Sobic008G185400 Sobic003G368500 Sobic003G368500 Sobic006G182100--Sobic003G368500 Sobic001G445800 Sobic001G445800 Sobic006G182100--Sobic001G445800 Sobic010G213400 Sobic010G213400 Sobic004G284500--Sobic010G213400 Sobic004G284500--Sobic006G182100 Sobic009G111600 Sobic009G111600 Sobic004G284500--Sobic009G111600 Sobic002G153500 Sobic002G153500 Sobic004G284500--Sobic002G153500 Sobic004G272800 Sobic004G272800 Sobic004G284500--Sobic004G272800 Sobic004G284500--Sobic003G368500 Sobic004G284500--Sobic009G033700 Sobic004G284500--Sobic001G445800 Sobic004G284500--Sobic001G281400 Sobic010G086200 Sobic010G086200 Sobic009G033700--Sobic010G086200 Sobic003G037800 Sobic003G037800 Sobic009G033700--Sobic003G037800 Sobic009G033700--Sobic001G281400 Sobic003G249800 Sobic003G249800 Sobic009G033700--Sobic003G249800 Sobic007G198100 Sobic007G198100 Sobic009G033700--Sobic007G198100 Sobic009G129000 Sobic009G129000 Sobic009G033700--Sobic009G129000 Sobic002G245100 Sobic002G245100 Sobic009G033700--Sobic002G245100 Sobic009G143400 Sobic009G143400 Sobic009G033700--Sobic009G143400 Sobic004G065500 Sobic004G065500 Sobic009G033700--Sobic004G065500 Sobic003G285800 Sobic003G285800 Sobic002G046100--Sobic003G285800 Sobic002G046100--Sobic001G281400 Sobic002G345300 Sobic002G345300 Sobic002G046100--Sobic002G345300 Sobic002G187500 Sobic002G187500 Sobic002G046100--Sobic002G187500 Sobic002G046100--Sobic010G086200 Sobic004G061200 Sobic004G061200 Sobic002G046100--Sobic004G061200 Sobic001G477300 Sobic001G477300 Sobic002G046100--Sobic001G477300 Sobic002G267500 Sobic002G267500 Sobic002G046100--Sobic002G267500 Sobic002G190900 Sobic002G190900 Sobic002G046100--Sobic002G190900 Sobic008G129400 Sobic008G129400 Sobic010G018400--Sobic008G129400 Sobic010G018400--Sobic003G368500 Sobic003G155400 Sobic003G155400 Sobic010G018400--Sobic003G155400 Sobic009G176000 Sobic009G176000 Sobic010G018400--Sobic009G176000 Sobic007G051000 Sobic007G051000 Sobic010G018400--Sobic007G051000 Sobic010G154700 Sobic010G154700 Sobic010G018400--Sobic010G154700 Sobic001G132100 Sobic001G132100 Sobic010G018400--Sobic001G132100 Sobic001G048832 Sobic001G048832 Sobic010G018400--Sobic001G048832 Sobic010G018400--Sobic001G445800 Sobic004G196300--Sobic010G018400 Sobic004G196300--Sobic003G249800 Sobic001G309500 Sobic001G309500 Sobic004G196300--Sobic001G309500 Sobic001G034700 Sobic001G034700 Sobic004G196300--Sobic001G034700 Sobic004G196300--Sobic003G155400 Sobic002G078400 Sobic002G078400 Sobic004G196300--Sobic002G078400 Sobic004G196300--Sobic006G182100 Sobic004G066800 Sobic004G066800 Sobic004G196300--Sobic004G066800 Sobic010G153100 Sobic010G153100 Sobic004G196300--Sobic010G153100 Sobic004G187900 Sobic004G187900 Sobic001G281400--Sobic004G187900 Sobic001G281400--Sobic002G267500 Sobic010G149300 Sobic010G149300 Sobic001G281400--Sobic010G149300 Sobic001G281400--Sobic002G190900 Sobic001G281400--Sobic002G046100 Sobic001G281400--Sobic010G086200 Sobic009G141800 Sobic009G141800 Sobic001G281400--Sobic009G141800 Sobic009G008900 Sobic009G008900 Sobic001G281400--Sobic009G008900 Sobic001G499300 Sobic001G499300 Sobic001G281400--Sobic001G499300 Sobic008G185400--Sobic002G046100 Sobic010G041600 Sobic010G041600 Sobic008G185400--Sobic010G041600 Sobic008G185400--Sobic003G285800 Sobic006G143400 Sobic006G143400 Sobic008G185400--Sobic006G143400 Sobic008G185400--Sobic001G034700 Sobic008G185400--Sobic004G272800 Sobic008G185400--Sobic002G187500 Sobic008G185400--Sobic002G190900 Sobic008G185400--Sobic001G281400 Sobic003G368500--Sobic010G213400 Sobic003G368500--Sobic010G018400 Sobic001G224400 Sobic001G224400 Sobic003G368500--Sobic001G224400 Sobic003G368500--Sobic003G155400 Sobic004G310300 Sobic004G310300 Sobic003G368500--Sobic004G310300 Sobic003G368500--Sobic004G284500 Sobic005G188100 Sobic005G188100 Sobic003G368500--Sobic005G188100 Sobic003G368500--Sobic007G051000 Sobic001G418900 Sobic001G418900 Sobic003G368500--Sobic001G418900 Sobic001G445800--Sobic008G129400 Sobic003G321700 Sobic003G321700 Sobic001G445800--Sobic003G321700 Sobic001G445800--Sobic002G078400 Sobic001G445800--Sobic003G249800 Sobic001G445800--Sobic002G046100 Sobic001G445800--Sobic010G018400 Sobic001G445800--Sobic010G154700 Sobic001G019900 Sobic001G019900 Sobic001G445800--Sobic001G019900 Sobic001G445800--Sobic002G190900
Octagon: transcription factors


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