Gene annotation
Transcriptome id Sobic.007G195701.1
Synonym -
Functional annotation -
UniProt A0A1Z5RBS1
Pfam -
Panther DB PTHR37223
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G14430 : -
RAP-DB (Rice) LOC_Os08g41680.1 : expressed protein
MaizeGDB (Corn) Zm00025a030388
Brachypodium KQJ99095 , KQJ99094
Barley HORVU0Hr1G039920.5 , HORVU0Hr1G039920.4 , HORVU0Hr1G039920.1 , HORVU0Hr1G039920.3 , HORVU0Hr1G039920.2
Wheat TraesCS7D02G259200 , TraesCS7B02G155900 , TraesCS7A02G258400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G078400 ADP-ribosylation factor, putative, expressed K07937: ADP-ribosylation factor 1/2
K07977: Arf/Sar family, other
2 Sobic.006G182100 ORM1, putative, expressed -
3 Sobic.001G283500 VHS and GAT domain containing protein, expressed -
4 Sobic.002G214900 polygalacturonase, putative, expressed -
5 Sobic.006G010600 peptidyl-prolyl cis-trans isomerase, putative, expressed K09578: peptidyl-prolyl cis-trans isomerase NIMA-interacting 1
6 Sobic.001G309500 protein phosphatase 2C, putative, expressed K01102: pyruvate dehydrogenase phosphatase
7 Sobic.001G445800 expressed protein -
8 Sobic.003G220600 SNF7 domain containing protein, putative, expressed K12194: CHMP4, SNF7, charged multivesicular body protein 4
9 Sobic.002G333600 universal stress protein domain containing protein, putative, expressed -
10 Sobic.007G091000 thioredoxin domain-containing protein 9, putative, expressed -
11 Sobic.010G204300 expressed protein -
12 Sobic.001G441000 erwinia induced protein 2, putative, expressed -
13 Sobic.003G368500 Yip1 domain containing protein, expressed -
14 Sobic.010G018400 expressed protein K02153: ATPeV0E, V-type H+-transporting ATPase subunit e
15 Sobic.001G040800 ADP-ribosylation factor, putative, expressed K07937: ADP-ribosylation factor 1/2
K07977: Arf/Sar family, other
16 Sobic.005G228000 SNF7 domain containing protein, putative, expressed K12191: charged multivesicular body protein 2A
17 Sobic.004G196300 ras-related protein, putative, expressed K07877: Ras-related protein Rab-2A
18 Sobic.001G533300 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed K17794: mitochondrial import inner membrane translocase subunit TIM23
19 Sobic.001G403700 mitochondrial carrier protein, putative, expressed K15113: SLC25A28_37, solute carrier family 25 (mitochondrial iron transporter), member 28/37
20 Sobic.001G224400 eukaryotic translation initiation factor, putative, expressed K03259: translation initiation factor 4E


Gene co-expression network
sample Sobic007G195701 Sobic007G195701 Sobic002G078400 Sobic002G078400 Sobic007G195701--Sobic002G078400 Sobic006G182100 Sobic006G182100 Sobic007G195701--Sobic006G182100 Sobic001G283500 Sobic001G283500 Sobic007G195701--Sobic001G283500 Sobic002G214900 Sobic002G214900 Sobic007G195701--Sobic002G214900 Sobic006G010600 Sobic006G010600 Sobic007G195701--Sobic006G010600 Sobic001G309500 Sobic001G309500 Sobic007G195701--Sobic001G309500 Sobic001G445800 Sobic001G445800 Sobic007G195701--Sobic001G445800 Sobic003G220600 Sobic003G220600 Sobic007G195701--Sobic003G220600 Sobic002G333600 Sobic002G333600 Sobic007G195701--Sobic002G333600 Sobic004G300900 Sobic004G300900 Sobic002G078400--Sobic004G300900 Sobic010G065400 Sobic010G065400 Sobic002G078400--Sobic010G065400 Sobic003G362400 Sobic003G362400 Sobic002G078400--Sobic003G362400 Sobic007G091000 Sobic007G091000 Sobic002G078400--Sobic007G091000 Sobic008G132800 Sobic008G132800 Sobic002G078400--Sobic008G132800 Sobic002G078400--Sobic001G445800 Sobic001G331900 Sobic001G331900 Sobic002G078400--Sobic001G331900 Sobic009G198500 Sobic009G198500 Sobic002G078400--Sobic009G198500 Sobic010G029400 Sobic010G029400 Sobic002G078400--Sobic010G029400 Sobic004G284500 Sobic004G284500 Sobic006G182100--Sobic004G284500 Sobic009G033700 Sobic009G033700 Sobic006G182100--Sobic009G033700 Sobic002G046100 Sobic002G046100 Sobic006G182100--Sobic002G046100 Sobic010G018400 Sobic010G018400 Sobic006G182100--Sobic010G018400 Sobic004G196300 Sobic004G196300 Sobic006G182100--Sobic004G196300 Sobic001G281400 Sobic001G281400 Sobic006G182100--Sobic001G281400 Sobic008G185400 Sobic008G185400 Sobic006G182100--Sobic008G185400 Sobic003G368500 Sobic003G368500 Sobic006G182100--Sobic003G368500 Sobic006G182100--Sobic001G445800 Sobic008G016900 Sobic008G016900 Sobic001G283500--Sobic008G016900 Sobic001G283500--Sobic007G195701 Sobic001G403700 Sobic001G403700 Sobic001G283500--Sobic001G403700 Sobic003G115800 Sobic003G115800 Sobic001G283500--Sobic003G115800 Sobic009G160200 Sobic009G160200 Sobic001G283500--Sobic009G160200 Sobic010G204300 Sobic010G204300 Sobic001G283500--Sobic010G204300 Sobic002G296300 Sobic002G296300 Sobic001G283500--Sobic002G296300 Sobic010G062800 Sobic010G062800 Sobic001G283500--Sobic010G062800 Sobic010G188100 Sobic010G188100 Sobic001G283500--Sobic010G188100 Sobic007G114200 Sobic007G114200 Sobic002G214900--Sobic007G114200 Sobic002G214900--Sobic006G182100 Sobic001G409900 Sobic001G409900 Sobic002G214900--Sobic001G409900 Sobic002G214900--Sobic003G368500 Sobic007G115100 Sobic007G115100 Sobic002G214900--Sobic007G115100 Sobic002G214900--Sobic001G403700 Sobic001G224400 Sobic001G224400 Sobic002G214900--Sobic001G224400 Sobic002G214900--Sobic007G195701 Sobic002G214900--Sobic003G362400 Sobic004G103700 Sobic004G103700 Sobic006G010600--Sobic004G103700 Sobic006G010600--Sobic001G445800 Sobic004G145801 Sobic004G145801 Sobic006G010600--Sobic004G145801 Sobic001G172000 Sobic001G172000 Sobic006G010600--Sobic001G172000 Sobic010G204600 Sobic010G204600 Sobic006G010600--Sobic010G204600 Sobic006G010600--Sobic003G368500 Sobic003G181500 Sobic003G181500 Sobic006G010600--Sobic003G181500 Sobic006G010600--Sobic002G078400 Sobic004G310300 Sobic004G310300 Sobic006G010600--Sobic004G310300 Sobic001G309500--Sobic004G196300 Sobic010G153100 Sobic010G153100 Sobic001G309500--Sobic010G153100 Sobic001G309500--Sobic002G078400 Sobic003G217100 Sobic003G217100 Sobic001G309500--Sobic003G217100 Sobic001G526100 Sobic001G526100 Sobic001G309500--Sobic001G526100 Sobic002G090700 Sobic002G090700 Sobic001G309500--Sobic002G090700 Sobic001G309500--Sobic008G132800 Sobic004G066800 Sobic004G066800 Sobic001G309500--Sobic004G066800 Sobic003G155400 Sobic003G155400 Sobic001G309500--Sobic003G155400 Sobic008G129400 Sobic008G129400 Sobic001G445800--Sobic008G129400 Sobic003G321700 Sobic003G321700 Sobic001G445800--Sobic003G321700 Sobic001G445800--Sobic002G078400 Sobic003G249800 Sobic003G249800 Sobic001G445800--Sobic003G249800 Sobic001G445800--Sobic002G046100 Sobic001G445800--Sobic010G018400 Sobic010G154700 Sobic010G154700 Sobic001G445800--Sobic010G154700 Sobic001G019900 Sobic001G019900 Sobic001G445800--Sobic001G019900 Sobic002G190900 Sobic002G190900 Sobic001G445800--Sobic002G190900 Sobic003G248600 Sobic003G248600 Sobic003G220600--Sobic003G248600 Sobic002G202300 Sobic002G202300 Sobic003G220600--Sobic002G202300 Sobic003G253000 Sobic003G253000 Sobic003G220600--Sobic003G253000 Sobic003G220600--Sobic003G115800 Sobic007G059900 Sobic007G059900 Sobic003G220600--Sobic007G059900 Sobic004G293700 Sobic004G293700 Sobic003G220600--Sobic004G293700 Sobic003G220600--Sobic004G300900 Sobic003G367451 Sobic003G367451 Sobic003G220600--Sobic003G367451 Sobic009G146100 Sobic009G146100 Sobic003G220600--Sobic009G146100 Sobic004G157000 Sobic004G157000 Sobic002G333600--Sobic004G157000 Sobic002G333600--Sobic007G195701 Sobic002G333600--Sobic010G204600 Sobic002G333600--Sobic006G010600 Sobic002G333600--Sobic006G182100 Sobic001G433400 Sobic001G433400 Sobic002G333600--Sobic001G433400 Sobic001G095300 Sobic001G095300 Sobic002G333600--Sobic001G095300 Sobic002G333600--Sobic003G181500 Sobic002G333600--Sobic002G078400
Octagon: transcription factors


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