Gene annotation
Transcriptome id Sobic.001G309500.1
Synonym Sb01g030180
Functional annotation protein phosphatase 2C, putative, expressed
UniProt C5WTI1
Pfam PF00481
Panther DB PTHR13832 PTHR13832:SF324
NCBI CDD KOG0700; Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase
KEGG Orthology K01102; pyruvate dehydrogenase phosphatase
Gene Ontology GO:0003824; catalytic activity GO:0006470protein dephosphorylation GO:0004722protein serine/threonine phosphatase activity


Orthologs (automatic annotation)
TAIR AT4G38520 : Protein phosphatase 2C family protein
RAP-DB (Rice) LOC_Os10g39780.2 : protein phosphatase 2C, putative, expressed
MaizeGDB (Corn) Zm00025a052276
Brachypodium KQK23764 , KQJ97659
Barley HORVU1Hr1G052770.3 , HORVU1Hr1G052770.4 , HORVU1Hr1G052770.5 , HORVU1Hr1G052770.2 , HORVU1Hr1G052770.6 , HORVU1Hr1G052770.1
Wheat TraesCS1D02G208600 , TraesCS1B02G218900 , TraesCS1A02G205300 , TraesCS1A02G205300
Populus -


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cDNA sequences
Sobic.001G309500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G196300 ras-related protein, putative, expressed K07877: Ras-related protein Rab-2A
2 Sobic.010G153100 prefoldin, putative, expressed K14009: BCAP31, B-cell receptor-associated protein 31
3 Sobic.002G078400 ADP-ribosylation factor, putative, expressed K07937: ADP-ribosylation factor 1/2
K07977: Arf/Sar family, other
4 Sobic.003G217100 Yip1 domain containing protein, expressed -
5 Sobic.001G526100 uncharacterized Cys-rich domain containing protein, putative, expressed -
6 Sobic.002G090700 WD domain, G-beta repeat domain containing protein, expressed K14004: protein transport protein SEC13
7 Sobic.008G132800 expressed protein -
8 Sobic.004G066800 peptidase, T1 family, putative, expressed K02735: 20S proteasome subunit beta 3
9 Sobic.003G155400 miro, putative, expressed K07953: GTP-binding protein SAR1
10 Sobic.007G195701 - -
11 Sobic.010G204300 expressed protein -
12 Sobic.001G445800 expressed protein -
13 Sobic.001G064800 expp1 protein precursor, putative, expressed -
14 Sobic.003G249800 60S ribosomal protein L18a-1, putative, expressed -
15 Sobic.009G016201 - K09481: SEC61B, protein transport protein SEC61 subunit beta
16 Sobic.003G115800 miro, putative, expressed K07953: GTP-binding protein SAR1
17 Sobic.006G182100 ORM1, putative, expressed -
18 Sobic.010G018400 expressed protein K02153: ATPeV0E, V-type H+-transporting ATPase subunit e
19 Sobic.004G310300 phosphate carrier protein, mitochondrial precursor, putative, expressed K15102: SLC25A3, PHC, solute carrier family 25 (mitochondrial phosphate transporter), member 3
20 Sobic.003G362400 G10 protein, putative, expressed K12873: BUD31, bud site selection protein 31


Gene co-expression network
sample Sobic001G309500 Sobic001G309500 Sobic004G196300 Sobic004G196300 Sobic001G309500--Sobic004G196300 Sobic010G153100 Sobic010G153100 Sobic001G309500--Sobic010G153100 Sobic002G078400 Sobic002G078400 Sobic001G309500--Sobic002G078400 Sobic003G217100 Sobic003G217100 Sobic001G309500--Sobic003G217100 Sobic001G526100 Sobic001G526100 Sobic001G309500--Sobic001G526100 Sobic002G090700 Sobic002G090700 Sobic001G309500--Sobic002G090700 Sobic008G132800 Sobic008G132800 Sobic001G309500--Sobic008G132800 Sobic004G066800 Sobic004G066800 Sobic001G309500--Sobic004G066800 Sobic003G155400 Sobic003G155400 Sobic001G309500--Sobic003G155400 Sobic010G018400 Sobic010G018400 Sobic004G196300--Sobic010G018400 Sobic003G249800 Sobic003G249800 Sobic004G196300--Sobic003G249800 Sobic004G196300--Sobic001G309500 Sobic001G034700 Sobic001G034700 Sobic004G196300--Sobic001G034700 Sobic004G196300--Sobic003G155400 Sobic004G196300--Sobic002G078400 Sobic006G182100 Sobic006G182100 Sobic004G196300--Sobic006G182100 Sobic004G196300--Sobic004G066800 Sobic004G196300--Sobic010G153100 Sobic001G084900 Sobic001G084900 Sobic010G153100--Sobic001G084900 Sobic001G224400 Sobic001G224400 Sobic010G153100--Sobic001G224400 Sobic010G153100--Sobic003G155400 Sobic001G445800 Sobic001G445800 Sobic010G153100--Sobic001G445800 Sobic010G154700 Sobic010G154700 Sobic010G153100--Sobic010G154700 Sobic010G213400 Sobic010G213400 Sobic010G153100--Sobic010G213400 Sobic007G115100 Sobic007G115100 Sobic010G153100--Sobic007G115100 Sobic001G067601 Sobic001G067601 Sobic010G153100--Sobic001G067601 Sobic006G141500 Sobic006G141500 Sobic010G153100--Sobic006G141500 Sobic004G300900 Sobic004G300900 Sobic002G078400--Sobic004G300900 Sobic010G065400 Sobic010G065400 Sobic002G078400--Sobic010G065400 Sobic003G362400 Sobic003G362400 Sobic002G078400--Sobic003G362400 Sobic007G091000 Sobic007G091000 Sobic002G078400--Sobic007G091000 Sobic002G078400--Sobic008G132800 Sobic002G078400--Sobic001G445800 Sobic001G331900 Sobic001G331900 Sobic002G078400--Sobic001G331900 Sobic009G198500 Sobic009G198500 Sobic002G078400--Sobic009G198500 Sobic010G029400 Sobic010G029400 Sobic002G078400--Sobic010G029400 Sobic001G105100 Sobic001G105100 Sobic003G217100--Sobic001G105100 Sobic003G217100--Sobic002G090700 Sobic003G217100--Sobic008G132800 Sobic006G222400 Sobic006G222400 Sobic003G217100--Sobic006G222400 Sobic003G217100--Sobic001G309500 Sobic001G067900 Sobic001G067900 Sobic003G217100--Sobic001G067900 Sobic005G184200 Sobic005G184200 Sobic003G217100--Sobic005G184200 Sobic001G237500 Sobic001G237500 Sobic003G217100--Sobic001G237500 Sobic001G408100 Sobic001G408100 Sobic003G217100--Sobic001G408100 Sobic001G526100--Sobic001G309500 Sobic001G526100--Sobic002G078400 Sobic004G157800 Sobic004G157800 Sobic001G526100--Sobic004G157800 Sobic001G064800 Sobic001G064800 Sobic001G526100--Sobic001G064800 Sobic001G526100--Sobic010G065400 Sobic001G526100--Sobic004G196300 Sobic003G381000 Sobic003G381000 Sobic001G526100--Sobic003G381000 Sobic001G526100--Sobic003G217100 Sobic002G368400 Sobic002G368400 Sobic001G526100--Sobic002G368400 Sobic003G116600 Sobic003G116600 Sobic002G090700--Sobic003G116600 Sobic010G007400 Sobic010G007400 Sobic002G090700--Sobic010G007400 Sobic002G090700--Sobic003G217100 Sobic004G159000 Sobic004G159000 Sobic002G090700--Sobic004G159000 Sobic003G152900 Sobic003G152900 Sobic002G090700--Sobic003G152900 Sobic002G090700--Sobic004G066800 Sobic002G090700--Sobic001G309500 Sobic002G090700--Sobic002G078400 Sobic001G031900 Sobic001G031900 Sobic002G090700--Sobic001G031900 Sobic008G132800--Sobic010G029400 Sobic008G132800--Sobic002G078400 Sobic009G016201 Sobic009G016201 Sobic008G132800--Sobic009G016201 Sobic008G132800--Sobic001G331900 Sobic008G132800--Sobic004G066800 Sobic008G132800--Sobic001G105100 Sobic005G157200 Sobic005G157200 Sobic008G132800--Sobic005G157200 Sobic008G132800--Sobic010G065400 Sobic008G132800--Sobic003G217100 Sobic003G129800 Sobic003G129800 Sobic004G066800--Sobic003G129800 Sobic004G310300 Sobic004G310300 Sobic004G066800--Sobic004G310300 Sobic001G483100 Sobic001G483100 Sobic004G066800--Sobic001G483100 Sobic007G092100 Sobic007G092100 Sobic004G066800--Sobic007G092100 Sobic004G066800--Sobic010G154700 Sobic005G111100 Sobic005G111100 Sobic004G066800--Sobic005G111100 Sobic001G513500 Sobic001G513500 Sobic004G066800--Sobic001G513500 Sobic004G066800--Sobic003G155400 Sobic009G191200 Sobic009G191200 Sobic004G066800--Sobic009G191200 Sobic003G155400--Sobic010G154700 Sobic003G209000 Sobic003G209000 Sobic003G155400--Sobic003G209000 Sobic003G155400--Sobic004G310300 Sobic003G072300 Sobic003G072300 Sobic003G155400--Sobic003G072300 Sobic003G155400--Sobic010G018400 Sobic009G119900 Sobic009G119900 Sobic003G155400--Sobic009G119900 Sobic007G051000 Sobic007G051000 Sobic003G155400--Sobic007G051000 Sobic010G204500 Sobic010G204500 Sobic003G155400--Sobic010G204500 Sobic003G215700 Sobic003G215700 Sobic003G155400--Sobic003G215700
Octagon: transcription factors


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