Gene annotation
Transcriptome id Sobic.003G362400.1
Synonym Sb03g040410
Functional annotation G10 protein, putative, expressed
UniProt A0A1B6Q730
Pfam PF01125
Panther DB PTHR19411 PTHR19411:SF2
NCBI CDD KOG3404; G10 protein/predicted nuclear transcription regulator
KEGG Orthology K12873; BUD31, bud site selection protein 31
Gene Ontology GO:0005634; nucleus


Orthologs (automatic annotation)
TAIR AT4G21110 : G10 family protein
RAP-DB (Rice) LOC_Os04g55290.2 : G10 protein, putative, expressed
MaizeGDB (Corn) Zm00025a039595 , Zm00025a026785 , Zm00025a039591
Brachypodium KQK10661 , KQK10662
Barley HORVU3Hr1G084520.1
Wheat TraesCS3A02G370700 , TraesCS3B02G402900 , TraesCS1A02G277600 , TraesCS3B02G402900 , TraesCS1B02G286600 , TraesCS1B02G286600 , TraesCS1B02G286600 , TraesCS3D02G363800 , TraesCS1D02G276800
Populus -


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cDNA sequences
Sobic.003G362400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G078400 ADP-ribosylation factor, putative, expressed K07937: ADP-ribosylation factor 1/2
K07977: Arf/Sar family, other
2 Sobic.004G107600 prefoldin subunit, putative, expressed K04798: pfdB, prefoldin beta subunit
3 Sobic.001G529000 THO complex subunit 7, putative, expressed K13176: THO complex subunit 7
4 Sobic.007G091000 thioredoxin domain-containing protein 9, putative, expressed -
5 Sobic.005G111100 SKP1-like protein 1B, putative, expressed K03094: SKP1, S-phase kinase-associated protein 1
6 Sobic.002G116200 adenylate kinase isoenzyme 6, putative, expressed K18532: AK6, adenylate kinase
7 Sobic.001G331900 expressed protein -
8 Sobic.010G213400 protein transport protein SEC61 subunit gamma, putative, expressed K07342: SEC61G, SSS1, protein transport protein SEC61 subunit gamma and related proteins
9 Sobic.009G232000 ribosomal protein L24, putative, expressed K02896: RP-L24e, large subunit ribosomal protein L24e
10 Sobic.010G163600 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
11 Sobic.005G157200 prefoldin subunit, putative, expressed K09549: prefoldin subunit 2
12 Sobic.007G163700 zinc finger protein 593, putative, expressed K14821: bud site selection protein 20
13 Sobic.003G155400 miro, putative, expressed K07953: GTP-binding protein SAR1
14 Sobic.001G224400 eukaryotic translation initiation factor, putative, expressed K03259: translation initiation factor 4E
15 Sobic.006G010600 peptidyl-prolyl cis-trans isomerase, putative, expressed K09578: peptidyl-prolyl cis-trans isomerase NIMA-interacting 1
16 Sobic.001G018800 60S ribosomal protein L44, putative, expressed K02929: RP-L44e, large subunit ribosomal protein L44e
17 Sobic.001G128400 peptidase, T1 family, putative, expressed K02734: 20S proteasome subunit beta 4
18 Sobic.005G092800 expressed protein -
19 Sobic.006G141500 expressed protein -
20 Sobic.002G218000 expressed protein K13528: mediator of RNA polymerase II transcription subunit 20


Gene co-expression network
sample Sobic003G362400 Sobic003G362400 Sobic002G078400 Sobic002G078400 Sobic003G362400--Sobic002G078400 Sobic004G107600 Sobic004G107600 Sobic003G362400--Sobic004G107600 Sobic001G529000 Sobic001G529000 Sobic003G362400--Sobic001G529000 Sobic007G091000 Sobic007G091000 Sobic003G362400--Sobic007G091000 Sobic005G111100 Sobic005G111100 Sobic003G362400--Sobic005G111100 Sobic002G116200 Sobic002G116200 Sobic003G362400--Sobic002G116200 Sobic001G331900 Sobic001G331900 Sobic003G362400--Sobic001G331900 Sobic010G213400 Sobic010G213400 Sobic003G362400--Sobic010G213400 Sobic009G232000 Sobic009G232000 Sobic003G362400--Sobic009G232000 Sobic004G300900 Sobic004G300900 Sobic002G078400--Sobic004G300900 Sobic010G065400 Sobic010G065400 Sobic002G078400--Sobic010G065400 Sobic002G078400--Sobic003G362400 Sobic002G078400--Sobic007G091000 Sobic008G132800 Sobic008G132800 Sobic002G078400--Sobic008G132800 Sobic001G445800 Sobic001G445800 Sobic002G078400--Sobic001G445800 Sobic002G078400--Sobic001G331900 Sobic009G198500 Sobic009G198500 Sobic002G078400--Sobic009G198500 Sobic010G029400 Sobic010G029400 Sobic002G078400--Sobic010G029400 Sobic004G107600--Sobic001G331900 Sobic004G107600--Sobic003G362400 Sobic001G377800 Sobic001G377800 Sobic004G107600--Sobic001G377800 Sobic010G182600 Sobic010G182600 Sobic004G107600--Sobic010G182600 Sobic005G092800 Sobic005G092800 Sobic004G107600--Sobic005G092800 Sobic005G157200 Sobic005G157200 Sobic004G107600--Sobic005G157200 Sobic004G107600--Sobic002G078400 Sobic003G321700 Sobic003G321700 Sobic004G107600--Sobic003G321700 Sobic004G107600--Sobic001G445800 Sobic001G529000--Sobic003G362400 Sobic004G248800 Sobic004G248800 Sobic001G529000--Sobic004G248800 Sobic003G124800 Sobic003G124800 Sobic001G529000--Sobic003G124800 Sobic001G529000--Sobic001G331900 Sobic001G529000--Sobic005G157200 Sobic007G163700 Sobic007G163700 Sobic001G529000--Sobic007G163700 Sobic010G039800 Sobic010G039800 Sobic001G529000--Sobic010G039800 Sobic007G203700 Sobic007G203700 Sobic001G529000--Sobic007G203700 Sobic001G529000--Sobic004G300900 Sobic007G091000--Sobic002G078400 Sobic007G091000--Sobic003G362400 Sobic001G128400 Sobic001G128400 Sobic007G091000--Sobic001G128400 Sobic007G091000--Sobic005G111100 Sobic007G152400 Sobic007G152400 Sobic007G091000--Sobic007G152400 Sobic003G305100 Sobic003G305100 Sobic007G091000--Sobic003G305100 Sobic003G368500 Sobic003G368500 Sobic007G091000--Sobic003G368500 Sobic001G025600 Sobic001G025600 Sobic007G091000--Sobic001G025600 Sobic003G277000 Sobic003G277000 Sobic007G091000--Sobic003G277000 Sobic005G111100--Sobic001G128400 Sobic003G129800 Sobic003G129800 Sobic005G111100--Sobic003G129800 Sobic004G032000 Sobic004G032000 Sobic005G111100--Sobic004G032000 Sobic004G066800 Sobic004G066800 Sobic005G111100--Sobic004G066800 Sobic003G280700 Sobic003G280700 Sobic005G111100--Sobic003G280700 Sobic005G111100--Sobic007G152400 Sobic010G054200 Sobic010G054200 Sobic005G111100--Sobic010G054200 Sobic006G231700 Sobic006G231700 Sobic005G111100--Sobic006G231700 Sobic002G218000 Sobic002G218000 Sobic005G111100--Sobic002G218000 Sobic002G116200--Sobic003G362400 Sobic002G116200--Sobic005G111100 Sobic002G116200--Sobic005G157200 Sobic002G116200--Sobic002G078400 Sobic002G116200--Sobic003G321700 Sobic002G116200--Sobic001G445800 Sobic002G116200--Sobic004G300900 Sobic002G116200--Sobic001G128400 Sobic002G116200--Sobic001G331900 Sobic001G331900--Sobic004G107600 Sobic001G331900--Sobic005G157200 Sobic008G058300 Sobic008G058300 Sobic001G331900--Sobic008G058300 Sobic001G331900--Sobic002G078400 Sobic001G331900--Sobic008G132800 Sobic001G331900--Sobic004G300900 Sobic001G331900--Sobic001G377800 Sobic001G331900--Sobic003G362400 Sobic001G331900--Sobic001G529000 Sobic010G213400--Sobic003G368500 Sobic003G249800 Sobic003G249800 Sobic010G213400--Sobic003G249800 Sobic009G033700 Sobic009G033700 Sobic010G213400--Sobic009G033700 Sobic004G284500 Sobic004G284500 Sobic010G213400--Sobic004G284500 Sobic010G163600 Sobic010G163600 Sobic010G213400--Sobic010G163600 Sobic001G224400 Sobic001G224400 Sobic010G213400--Sobic001G224400 Sobic006G062800 Sobic006G062800 Sobic010G213400--Sobic006G062800 Sobic010G213400--Sobic001G445800 Sobic010G153100 Sobic010G153100 Sobic010G213400--Sobic010G153100 Sobic001G018800 Sobic001G018800 Sobic009G232000--Sobic001G018800 Sobic001G011200 Sobic001G011200 Sobic009G232000--Sobic001G011200 Sobic001G513500 Sobic001G513500 Sobic009G232000--Sobic001G513500 Sobic001G436200 Sobic001G436200 Sobic009G232000--Sobic001G436200 Sobic002G056200 Sobic002G056200 Sobic009G232000--Sobic002G056200 Sobic009G232000--Sobic001G377800 Sobic010G100000 Sobic010G100000 Sobic009G232000--Sobic010G100000 Sobic009G232000--Sobic003G321700 Sobic006G213000 Sobic006G213000 Sobic009G232000--Sobic006G213000
Octagon: transcription factors


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