Gene annotation
Transcriptome id Sobic.004G107600.1
Synonym Sb04g008790, PFD6
Functional annotation prefoldin subunit, putative, expressed
UniProt C5XZ05
Pfam PF01920
Panther DB PTHR21431 PTHR21431:SF0
NCBI CDD KOG3478; Prefoldin subunit 6, KE2 family
KEGG Orthology K04798; pfdB, prefoldin beta subunit
Gene Ontology GO:0016272; prefoldin complex GO:0006457protein folding


Orthologs (automatic annotation)
TAIR AT1G29990 : prefoldin 6
RAP-DB (Rice) LOC_Os02g14860.1 : prefoldin subunit, putative, expressed
MaizeGDB (Corn) Zm00025a019983
Brachypodium KQJ94224
Barley -
Wheat TraesCS3D02G126100 , TraesCS3B02G143500 , TraesCS3A02G124600
Populus -


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cDNA sequences
Sobic.004G107600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G331900 expressed protein -
2 Sobic.003G362400 G10 protein, putative, expressed K12873: BUD31, bud site selection protein 31
3 Sobic.001G377800 60S ribosomal protein L18-3, putative, expressed K02883: RP-L18e, large subunit ribosomal protein L18e
4 Sobic.010G182600 elongation factor Tu, putative, expressed K03231: elongation factor 1-alpha
5 Sobic.005G092800 expressed protein -
6 Sobic.005G157200 prefoldin subunit, putative, expressed K09549: prefoldin subunit 2
7 Sobic.002G078400 ADP-ribosylation factor, putative, expressed K07937: ADP-ribosylation factor 1/2
K07977: Arf/Sar family, other
8 Sobic.003G321700 KH domain containing protein, putative, expressed K11884: PNO1, RNA-binding protein PNO1
9 Sobic.001G445800 expressed protein -
10 Sobic.003G249800 60S ribosomal protein L18a-1, putative, expressed -
11 Sobic.009G022400 ribosomal protein L13, putative, expressed K02872: RP-L13Ae, large subunit ribosomal protein L13Ae
12 Sobic.001G046300 ribosomal protein, putative, expressed K02981: RP-S2e, small subunit ribosomal protein S2e
13 Sobic.004G300900 OsGrx_C3 - glutaredoxin subgroup I, expressed K03676: grxC, GLRX, glutaredoxin 3
14 Sobic.009G232000 ribosomal protein L24, putative, expressed K02896: RP-L24e, large subunit ribosomal protein L24e
15 Sobic.008G058300 RNA polymerases N 8 kDa subunit, putative, expressed K03007: RPB10, DNA-directed RNA polymerases I, II, and III subunit RPABC5
16 Sobic.010G106200 signal recognition particle 9 kDa protein, putative, expressed K03109: signal recognition particle subunit SRP9
17 Sobic.009G065400 ribosomal protein L13, putative, expressed K02873: RP-L13e, large subunit ribosomal protein L13e
18 Sobic.002G259000 ribosomal protein L7Ae, putative, expressed K02936: RP-L7Ae, large subunit ribosomal protein L7Ae
19 Sobic.002G406500 elongation factor protein, putative, expressed K03232: elongation factor 1-beta
20 Sobic.008G132800 expressed protein -


Gene co-expression network
sample Sobic004G107600 Sobic004G107600 Sobic001G331900 Sobic001G331900 Sobic004G107600--Sobic001G331900 Sobic003G362400 Sobic003G362400 Sobic004G107600--Sobic003G362400 Sobic001G377800 Sobic001G377800 Sobic004G107600--Sobic001G377800 Sobic010G182600 Sobic010G182600 Sobic004G107600--Sobic010G182600 Sobic005G092800 Sobic005G092800 Sobic004G107600--Sobic005G092800 Sobic005G157200 Sobic005G157200 Sobic004G107600--Sobic005G157200 Sobic002G078400 Sobic002G078400 Sobic004G107600--Sobic002G078400 Sobic003G321700 Sobic003G321700 Sobic004G107600--Sobic003G321700 Sobic001G445800 Sobic001G445800 Sobic004G107600--Sobic001G445800 Sobic001G331900--Sobic004G107600 Sobic001G331900--Sobic005G157200 Sobic008G058300 Sobic008G058300 Sobic001G331900--Sobic008G058300 Sobic001G331900--Sobic002G078400 Sobic008G132800 Sobic008G132800 Sobic001G331900--Sobic008G132800 Sobic004G300900 Sobic004G300900 Sobic001G331900--Sobic004G300900 Sobic001G331900--Sobic001G377800 Sobic001G331900--Sobic003G362400 Sobic001G529000 Sobic001G529000 Sobic001G331900--Sobic001G529000 Sobic003G362400--Sobic002G078400 Sobic003G362400--Sobic004G107600 Sobic003G362400--Sobic001G529000 Sobic007G091000 Sobic007G091000 Sobic003G362400--Sobic007G091000 Sobic005G111100 Sobic005G111100 Sobic003G362400--Sobic005G111100 Sobic002G116200 Sobic002G116200 Sobic003G362400--Sobic002G116200 Sobic003G362400--Sobic001G331900 Sobic010G213400 Sobic010G213400 Sobic003G362400--Sobic010G213400 Sobic009G232000 Sobic009G232000 Sobic003G362400--Sobic009G232000 Sobic002G406500 Sobic002G406500 Sobic001G377800--Sobic002G406500 Sobic004G104100 Sobic004G104100 Sobic001G377800--Sobic004G104100 Sobic001G085400 Sobic001G085400 Sobic001G377800--Sobic001G085400 Sobic001G091801 Sobic001G091801 Sobic001G377800--Sobic001G091801 Sobic007G019000 Sobic007G019000 Sobic001G377800--Sobic007G019000 Sobic006G221200 Sobic006G221200 Sobic001G377800--Sobic006G221200 Sobic006G081100 Sobic006G081100 Sobic001G377800--Sobic006G081100 Sobic002G049300 Sobic002G049300 Sobic001G377800--Sobic002G049300 Sobic009G050300 Sobic009G050300 Sobic001G377800--Sobic009G050300 Sobic002G259000 Sobic002G259000 Sobic010G182600--Sobic002G259000 Sobic001G046300 Sobic001G046300 Sobic010G182600--Sobic001G046300 Sobic010G182200 Sobic010G182200 Sobic010G182600--Sobic010G182200 Sobic002G364100 Sobic002G364100 Sobic010G182600--Sobic002G364100 Sobic004G145801 Sobic004G145801 Sobic010G182600--Sobic004G145801 Sobic010G182600--Sobic001G091801 Sobic009G065400 Sobic009G065400 Sobic010G182600--Sobic009G065400 Sobic010G182600--Sobic002G406500 Sobic002G364500 Sobic002G364500 Sobic010G182600--Sobic002G364500 Sobic001G019900 Sobic001G019900 Sobic005G092800--Sobic001G019900 Sobic005G092800--Sobic003G321700 Sobic005G092800--Sobic004G107600 Sobic005G092800--Sobic001G445800 Sobic005G092800--Sobic010G213400 Sobic003G249800 Sobic003G249800 Sobic005G092800--Sobic003G249800 Sobic005G092800--Sobic005G157200 Sobic005G092800--Sobic003G362400 Sobic009G094450 Sobic009G094450 Sobic005G092800--Sobic009G094450 Sobic005G157200--Sobic008G058300 Sobic005G157200--Sobic001G331900 Sobic005G157200--Sobic001G377800 Sobic003G025200 Sobic003G025200 Sobic005G157200--Sobic003G025200 Sobic005G157200--Sobic002G406500 Sobic007G163700 Sobic007G163700 Sobic005G157200--Sobic007G163700 Sobic010G029400 Sobic010G029400 Sobic005G157200--Sobic010G029400 Sobic005G157200--Sobic004G107600 Sobic005G157200--Sobic001G529000 Sobic002G078400--Sobic004G300900 Sobic010G065400 Sobic010G065400 Sobic002G078400--Sobic010G065400 Sobic002G078400--Sobic003G362400 Sobic002G078400--Sobic007G091000 Sobic002G078400--Sobic008G132800 Sobic002G078400--Sobic001G445800 Sobic002G078400--Sobic001G331900 Sobic009G198500 Sobic009G198500 Sobic002G078400--Sobic009G198500 Sobic002G078400--Sobic010G029400 Sobic007G212600 Sobic007G212600 Sobic003G321700--Sobic007G212600 Sobic010G260100 Sobic010G260100 Sobic003G321700--Sobic010G260100 Sobic003G321700--Sobic001G091801 Sobic007G190800 Sobic007G190800 Sobic003G321700--Sobic007G190800 Sobic003G322400 Sobic003G322400 Sobic003G321700--Sobic003G322400 Sobic010G259900 Sobic010G259900 Sobic003G321700--Sobic010G259900 Sobic003G321700--Sobic004G145801 Sobic006G147000 Sobic006G147000 Sobic003G321700--Sobic006G147000 Sobic003G321700--Sobic004G104100 Sobic008G129400 Sobic008G129400 Sobic001G445800--Sobic008G129400 Sobic001G445800--Sobic003G321700 Sobic001G445800--Sobic002G078400 Sobic001G445800--Sobic003G249800 Sobic002G046100 Sobic002G046100 Sobic001G445800--Sobic002G046100 Sobic010G018400 Sobic010G018400 Sobic001G445800--Sobic010G018400 Sobic010G154700 Sobic010G154700 Sobic001G445800--Sobic010G154700 Sobic001G445800--Sobic001G019900 Sobic002G190900 Sobic002G190900 Sobic001G445800--Sobic002G190900
Octagon: transcription factors


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