Gene annotation
Transcriptome id Sobic.005G092800.1
Synonym
Functional annotation expressed protein
UniProt A0A1B6PR75
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os11g11970.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G019900 zinc finger, C3HC4 type domain containing protein, expressed K15707: RING finger protein 170
2 Sobic.003G321700 KH domain containing protein, putative, expressed K11884: PNO1, RNA-binding protein PNO1
3 Sobic.004G107600 prefoldin subunit, putative, expressed K04798: pfdB, prefoldin beta subunit
4 Sobic.001G445800 expressed protein -
5 Sobic.010G213400 protein transport protein SEC61 subunit gamma, putative, expressed K07342: SEC61G, SSS1, protein transport protein SEC61 subunit gamma and related proteins
6 Sobic.003G249800 60S ribosomal protein L18a-1, putative, expressed -
7 Sobic.005G157200 prefoldin subunit, putative, expressed K09549: prefoldin subunit 2
8 Sobic.003G362400 G10 protein, putative, expressed K12873: BUD31, bud site selection protein 31
9 Sobic.009G094450 - -
10 Sobic.005G228000 SNF7 domain containing protein, putative, expressed K12191: charged multivesicular body protein 2A
11 Sobic.010G257100 CGMC_MAPKCMGC_2.11 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
12 Sobic.004G300900 OsGrx_C3 - glutaredoxin subgroup I, expressed K03676: grxC, GLRX, glutaredoxin 3
13 Sobic.002G116200 adenylate kinase isoenzyme 6, putative, expressed K18532: AK6, adenylate kinase
14 Sobic.001G331900 expressed protein -
15 Sobic.006G182100 ORM1, putative, expressed -
16 Sobic.007G190800 mitochondrial import inner membrane translocase subunit Tim, putative, expressed K17780: mitochondrial import inner membrane translocase subunit TIM8
17 Sobic.001G377800 60S ribosomal protein L18-3, putative, expressed K02883: RP-L18e, large subunit ribosomal protein L18e
18 Sobic.009G249000 CAMK_CAMK_like.5 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
19 Sobic.002G022400 RNA recognition motif containing protein, putative, expressed K14411: RNA-binding protein Musashi
20 Sobic.009G016201 - K09481: SEC61B, protein transport protein SEC61 subunit beta


Gene co-expression network
sample Sobic005G092800 Sobic005G092800 Sobic001G019900 Sobic001G019900 Sobic005G092800--Sobic001G019900 Sobic003G321700 Sobic003G321700 Sobic005G092800--Sobic003G321700 Sobic004G107600 Sobic004G107600 Sobic005G092800--Sobic004G107600 Sobic001G445800 Sobic001G445800 Sobic005G092800--Sobic001G445800 Sobic010G213400 Sobic010G213400 Sobic005G092800--Sobic010G213400 Sobic003G249800 Sobic003G249800 Sobic005G092800--Sobic003G249800 Sobic005G157200 Sobic005G157200 Sobic005G092800--Sobic005G157200 Sobic003G362400 Sobic003G362400 Sobic005G092800--Sobic003G362400 Sobic009G094450 Sobic009G094450 Sobic005G092800--Sobic009G094450 Sobic001G067601 Sobic001G067601 Sobic001G019900--Sobic001G067601 Sobic005G228000 Sobic005G228000 Sobic001G019900--Sobic005G228000 Sobic009G023200 Sobic009G023200 Sobic001G019900--Sobic009G023200 Sobic003G350300 Sobic003G350300 Sobic001G019900--Sobic003G350300 Sobic001G019900--Sobic003G249800 Sobic002G046100 Sobic002G046100 Sobic001G019900--Sobic002G046100 Sobic001G019900--Sobic001G445800 Sobic002G212200 Sobic002G212200 Sobic001G019900--Sobic002G212200 Sobic001G019900--Sobic003G321700 Sobic007G212600 Sobic007G212600 Sobic003G321700--Sobic007G212600 Sobic010G260100 Sobic010G260100 Sobic003G321700--Sobic010G260100 Sobic001G091801 Sobic001G091801 Sobic003G321700--Sobic001G091801 Sobic007G190800 Sobic007G190800 Sobic003G321700--Sobic007G190800 Sobic003G322400 Sobic003G322400 Sobic003G321700--Sobic003G322400 Sobic010G259900 Sobic010G259900 Sobic003G321700--Sobic010G259900 Sobic004G145801 Sobic004G145801 Sobic003G321700--Sobic004G145801 Sobic006G147000 Sobic006G147000 Sobic003G321700--Sobic006G147000 Sobic004G104100 Sobic004G104100 Sobic003G321700--Sobic004G104100 Sobic001G331900 Sobic001G331900 Sobic004G107600--Sobic001G331900 Sobic004G107600--Sobic003G362400 Sobic001G377800 Sobic001G377800 Sobic004G107600--Sobic001G377800 Sobic010G182600 Sobic010G182600 Sobic004G107600--Sobic010G182600 Sobic004G107600--Sobic005G092800 Sobic004G107600--Sobic005G157200 Sobic002G078400 Sobic002G078400 Sobic004G107600--Sobic002G078400 Sobic004G107600--Sobic003G321700 Sobic004G107600--Sobic001G445800 Sobic008G129400 Sobic008G129400 Sobic001G445800--Sobic008G129400 Sobic001G445800--Sobic003G321700 Sobic001G445800--Sobic002G078400 Sobic001G445800--Sobic003G249800 Sobic001G445800--Sobic002G046100 Sobic010G018400 Sobic010G018400 Sobic001G445800--Sobic010G018400 Sobic010G154700 Sobic010G154700 Sobic001G445800--Sobic010G154700 Sobic001G445800--Sobic001G019900 Sobic002G190900 Sobic002G190900 Sobic001G445800--Sobic002G190900 Sobic003G368500 Sobic003G368500 Sobic010G213400--Sobic003G368500 Sobic010G213400--Sobic003G249800 Sobic009G033700 Sobic009G033700 Sobic010G213400--Sobic009G033700 Sobic004G284500 Sobic004G284500 Sobic010G213400--Sobic004G284500 Sobic010G163600 Sobic010G163600 Sobic010G213400--Sobic010G163600 Sobic001G224400 Sobic001G224400 Sobic010G213400--Sobic001G224400 Sobic006G062800 Sobic006G062800 Sobic010G213400--Sobic006G062800 Sobic010G213400--Sobic001G445800 Sobic010G153100 Sobic010G153100 Sobic010G213400--Sobic010G153100 Sobic008G161000 Sobic008G161000 Sobic003G249800--Sobic008G161000 Sobic001G037000 Sobic001G037000 Sobic003G249800--Sobic001G037000 Sobic003G249800--Sobic009G033700 Sobic003G249800--Sobic002G046100 Sobic002G282400 Sobic002G282400 Sobic003G249800--Sobic002G282400 Sobic002G330000 Sobic002G330000 Sobic003G249800--Sobic002G330000 Sobic009G143400 Sobic009G143400 Sobic003G249800--Sobic009G143400 Sobic002G211900 Sobic002G211900 Sobic003G249800--Sobic002G211900 Sobic003G181500 Sobic003G181500 Sobic003G249800--Sobic003G181500 Sobic008G058300 Sobic008G058300 Sobic005G157200--Sobic008G058300 Sobic005G157200--Sobic001G331900 Sobic005G157200--Sobic001G377800 Sobic003G025200 Sobic003G025200 Sobic005G157200--Sobic003G025200 Sobic002G406500 Sobic002G406500 Sobic005G157200--Sobic002G406500 Sobic007G163700 Sobic007G163700 Sobic005G157200--Sobic007G163700 Sobic010G029400 Sobic010G029400 Sobic005G157200--Sobic010G029400 Sobic005G157200--Sobic004G107600 Sobic001G529000 Sobic001G529000 Sobic005G157200--Sobic001G529000 Sobic003G362400--Sobic002G078400 Sobic003G362400--Sobic004G107600 Sobic003G362400--Sobic001G529000 Sobic007G091000 Sobic007G091000 Sobic003G362400--Sobic007G091000 Sobic005G111100 Sobic005G111100 Sobic003G362400--Sobic005G111100 Sobic002G116200 Sobic002G116200 Sobic003G362400--Sobic002G116200 Sobic003G362400--Sobic001G331900 Sobic003G362400--Sobic010G213400 Sobic009G232000 Sobic009G232000 Sobic003G362400--Sobic009G232000 Sobic009G094450--Sobic005G228000 Sobic009G094450--Sobic010G153100 Sobic009G094450--Sobic005G092800 Sobic009G094450--Sobic001G019900 Sobic004G026400 Sobic004G026400 Sobic009G094450--Sobic004G026400 Sobic009G094450--Sobic001G445800 Sobic009G094450--Sobic001G067601 Sobic010G217900 Sobic010G217900 Sobic009G094450--Sobic010G217900 Sobic009G094450--Sobic003G321700
Octagon: transcription factors


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