Gene annotation
Transcriptome id Sobic.009G249000.1
Synonym Sb09g029950, CDPK6, CPK3
Functional annotation CAMK_CAMK_like.5 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
UniProt C5YWJ5
Pfam PF07714 PF13499
Panther DB PTHR24349 PTHR24349:SF95
NCBI CDD KOG0032; Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily
KEGG Orthology K13412; calcium-dependent protein kinase
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT4G23650 : calcium-dependent protein kinase 6
RAP-DB (Rice) LOC_Os05g50810.1 : CAMK_CAMK_like.5 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
MaizeGDB (Corn) Zm00025a028374 , Zm00025a043932 , Zm00025a027150 , Zm00025a037757 , Zm00025a033401 , Zm00025a038581 , Zm00025a036734 , Zm00025a013124
Brachypodium KQK04719 , KQK08794 , KQJ86709
Barley HORVU1Hr1G092710.1 , HORVU1Hr1G092710.2 , HORVU1Hr1G092710.3 , HORVU3Hr1G055730.5 , HORVU3Hr1G055730.4 , HORVU3Hr1G055730.1 , HORVU3Hr1G055730.3 , HORVU3Hr1G055730.2
Wheat TraesCS3A02G351300 , TraesCS1A02G424200 , TraesCS3D02G228700 , TraesCS1B02G456700 , TraesCS3B02G254500 , TraesCS3A02G224900 , TraesCS1D02G433400
Populus -


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cDNA sequences
Sobic.009G249000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G092800 expressed protein -
2 Sobic.004G157800 LITAF-domain-containing protein, putative, expressed K19363: lipopolysaccharide-induced tumor necrosis factor-alpha factor
3 Sobic.004G172700 plant neutral invertase domain containing protein, expressed -
4 Sobic.004G352900 expressed protein -
5 Sobic.010G062800 transporter, major facilitator family, putative, expressed K13783: MFS transporter, OPA family, solute carrier family 37 (glycerol-3-phosphate transporter), member 1/2
6 Sobic.004G014000 serine/threonine-protein kinase Cx32, chloroplast precursor, putative, expressed -
7 Sobic.001G403700 mitochondrial carrier protein, putative, expressed K15113: SLC25A28_37, solute carrier family 25 (mitochondrial iron transporter), member 28/37
8 Sobic.002G078400 ADP-ribosylation factor, putative, expressed K07937: ADP-ribosylation factor 1/2
K07977: Arf/Sar family, other
9 Sobic.008G132800 expressed protein -
10 Sobic.004G272300 expressed protein -
11 Sobic.005G228000 SNF7 domain containing protein, putative, expressed K12191: charged multivesicular body protein 2A
12 Sobic.001G064800 expp1 protein precursor, putative, expressed -
13 Sobic.001G441600 potyvirus VPg interacting protein, putative, expressed -
14 Sobic.002G155500 ubiquitin-conjugating enzyme, putative, expressed K06689: UBE2D, UBC4, ubiquitin-conjugating enzyme E2 D
15 Sobic.010G047400 "HGW(Ortholog in rice:Li et al., 2012)"(PubMedID : 31659929)@proline-rich cell wall protein-like, putative, expressed -
16 Sobic.006G192500 CAMK_CAMK_like.27 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
17 Sobic.009G094450 - -
18 Sobic.003G116700 hydrolase, alpha/beta fold family domain containing protein, expressed -
19 Sobic.001G283500 VHS and GAT domain containing protein, expressed -
20 Sobic.001G294000 LOL3, putative, expressed -


Gene co-expression network
sample Sobic009G249000 Sobic009G249000 Sobic005G092800 Sobic005G092800 Sobic009G249000--Sobic005G092800 Sobic004G157800 Sobic004G157800 Sobic009G249000--Sobic004G157800 Sobic004G172700 Sobic004G172700 Sobic009G249000--Sobic004G172700 Sobic004G352900 Sobic004G352900 Sobic009G249000--Sobic004G352900 Sobic010G062800 Sobic010G062800 Sobic009G249000--Sobic010G062800 Sobic004G014000 Sobic004G014000 Sobic009G249000--Sobic004G014000 Sobic001G403700 Sobic001G403700 Sobic009G249000--Sobic001G403700 Sobic002G078400 Sobic002G078400 Sobic009G249000--Sobic002G078400 Sobic008G132800 Sobic008G132800 Sobic009G249000--Sobic008G132800 Sobic001G019900 Sobic001G019900 Sobic005G092800--Sobic001G019900 Sobic003G321700 Sobic003G321700 Sobic005G092800--Sobic003G321700 Sobic004G107600 Sobic004G107600 Sobic005G092800--Sobic004G107600 Sobic001G445800 Sobic001G445800 Sobic005G092800--Sobic001G445800 Sobic010G213400 Sobic010G213400 Sobic005G092800--Sobic010G213400 Sobic003G249800 Sobic003G249800 Sobic005G092800--Sobic003G249800 Sobic005G157200 Sobic005G157200 Sobic005G092800--Sobic005G157200 Sobic003G362400 Sobic003G362400 Sobic005G092800--Sobic003G362400 Sobic009G094450 Sobic009G094450 Sobic005G092800--Sobic009G094450 Sobic001G064800 Sobic001G064800 Sobic004G157800--Sobic001G064800 Sobic004G157800--Sobic002G078400 Sobic006G182100 Sobic006G182100 Sobic004G157800--Sobic006G182100 Sobic004G157800--Sobic009G249000 Sobic004G157800--Sobic009G094450 Sobic001G526100 Sobic001G526100 Sobic004G157800--Sobic001G526100 Sobic004G157800--Sobic005G092800 Sobic004G157800--Sobic001G445800 Sobic004G157800--Sobic001G403700 Sobic009G016201 Sobic009G016201 Sobic004G172700--Sobic009G016201 Sobic010G144400 Sobic010G144400 Sobic004G172700--Sobic010G144400 Sobic002G282400 Sobic002G282400 Sobic004G172700--Sobic002G282400 Sobic002G261800 Sobic002G261800 Sobic004G172700--Sobic002G261800 Sobic004G172700--Sobic003G249800 Sobic007G126100 Sobic007G126100 Sobic004G172700--Sobic007G126100 Sobic007G095400 Sobic007G095400 Sobic004G172700--Sobic007G095400 Sobic002G328300 Sobic002G328300 Sobic004G172700--Sobic002G328300 Sobic004G172700--Sobic001G064800 Sobic002G427900 Sobic002G427900 Sobic004G352900--Sobic002G427900 Sobic009G156300 Sobic009G156300 Sobic004G352900--Sobic009G156300 Sobic004G352900--Sobic004G014000 Sobic010G066300 Sobic010G066300 Sobic004G352900--Sobic010G066300 Sobic002G254650 Sobic002G254650 Sobic004G352900--Sobic002G254650 Sobic001G536500 Sobic001G536500 Sobic004G352900--Sobic001G536500 Sobic002G117200 Sobic002G117200 Sobic004G352900--Sobic002G117200 Sobic010G029400 Sobic010G029400 Sobic004G352900--Sobic010G029400 Sobic009G131100 Sobic009G131100 Sobic004G352900--Sobic009G131100 Sobic008G016900 Sobic008G016900 Sobic010G062800--Sobic008G016900 Sobic007G188100 Sobic007G188100 Sobic010G062800--Sobic007G188100 Sobic010G062800--Sobic001G403700 Sobic006G192500 Sobic006G192500 Sobic010G062800--Sobic006G192500 Sobic010G228000 Sobic010G228000 Sobic010G062800--Sobic010G228000 Sobic001G283500 Sobic001G283500 Sobic010G062800--Sobic001G283500 Sobic002G214900 Sobic002G214900 Sobic010G062800--Sobic002G214900 Sobic004G145200 Sobic004G145200 Sobic010G062800--Sobic004G145200 Sobic010G062800--Sobic006G182100 Sobic004G014000--Sobic004G352900 Sobic003G116700 Sobic003G116700 Sobic004G014000--Sobic003G116700 Sobic004G014000--Sobic009G249000 Sobic004G014000--Sobic004G172700 Sobic010G194900 Sobic010G194900 Sobic004G014000--Sobic010G194900 Sobic008G097401 Sobic008G097401 Sobic004G014000--Sobic008G097401 Sobic004G014000--Sobic009G156300 Sobic005G228000 Sobic005G228000 Sobic004G014000--Sobic005G228000 Sobic001G294000 Sobic001G294000 Sobic004G014000--Sobic001G294000 Sobic009G111600 Sobic009G111600 Sobic001G403700--Sobic009G111600 Sobic004G284500 Sobic004G284500 Sobic001G403700--Sobic004G284500 Sobic001G403700--Sobic002G078400 Sobic001G403700--Sobic006G182100 Sobic002G296300 Sobic002G296300 Sobic001G403700--Sobic002G296300 Sobic003G248600 Sobic003G248600 Sobic001G403700--Sobic003G248600 Sobic001G403700--Sobic008G132800 Sobic001G403700--Sobic002G214900 Sobic001G403700--Sobic010G213400 Sobic004G300900 Sobic004G300900 Sobic002G078400--Sobic004G300900 Sobic010G065400 Sobic010G065400 Sobic002G078400--Sobic010G065400 Sobic002G078400--Sobic003G362400 Sobic007G091000 Sobic007G091000 Sobic002G078400--Sobic007G091000 Sobic002G078400--Sobic008G132800 Sobic002G078400--Sobic001G445800 Sobic001G331900 Sobic001G331900 Sobic002G078400--Sobic001G331900 Sobic009G198500 Sobic009G198500 Sobic002G078400--Sobic009G198500 Sobic002G078400--Sobic010G029400 Sobic008G132800--Sobic010G029400 Sobic008G132800--Sobic002G078400 Sobic008G132800--Sobic009G016201 Sobic008G132800--Sobic001G331900 Sobic004G066800 Sobic004G066800 Sobic008G132800--Sobic004G066800 Sobic001G105100 Sobic001G105100 Sobic008G132800--Sobic001G105100 Sobic008G132800--Sobic005G157200 Sobic008G132800--Sobic010G065400 Sobic003G217100 Sobic003G217100 Sobic008G132800--Sobic003G217100
Octagon: transcription factors


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